| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 25,890 | G→A | intergenic (+315/‑256) | RPPX_00140 → / → RPPX_00145 | MarR family transcriptional regulator/(2Fe‑2S)‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 25,890 | 0 | G | A | 92.8% | 678.0 / 11.0 | 230 | intergenic (+315/‑256) | RPPX_00140/RPPX_00145 | MarR family transcriptional regulator/(2Fe‑2S)‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (1/15); new base A (121/86); total (126/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.68e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 247 total aligned reads displayed.
CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAT > CP009974/25730‑26037 | ctcCCCCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTACTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACGGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccgcc < 1:2406979/151‑1 (MQ=2) cACCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccgccgcc < 2:5355306/151‑1 (MQ=2) gccgTTCGCCGTTGCGGCCGCGACCGGATGCGCGGGTAAGCCGGCGCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTGCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccg < 2:1291574/151‑1 (MQ=17) gccgTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGt < 1:407225/151‑1 (MQ=2) gccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccg > 1:4576956/1‑151 (MQ=255) ccggccACCGTTGCCGCCGCCACCGTATTCGCGGGTAACCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgc < 1:3164828/146‑1 (MQ=255) ccgTTCACCGTGGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTa < 2:4475248/151‑1 (MQ=2) gTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTAtt > 2:1163662/1‑151 (MQ=2) gTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgccg > 1:1552540/1‑151 (MQ=255) gTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgccg < 1:2355118/151‑1 (MQ=255) ttCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTc < 2:846037/151‑1 (MQ=2) ttCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTc < 1:2523364/151‑1 (MQ=2) tCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCCCCGTTCCCGCCGCCCCCGTATTcc > 1:4051699/1‑150 (MQ=2) cACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTcgc < 1:1691039/151‑1 (MQ=2) gTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCACCACCGTTACCGCCGCCACCGt > 1:1178936/1‑151 (MQ=255) ccgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAGAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTc > 1:4751056/1‑151 (MQ=255) cgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTCGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCAGCCGCCGACCACAGTTATCGCCGCCACCGTATTcg > 2:2721733/1‑151 (MQ=17) gccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCCATCACCGTTACCGCCGCCACCGTATTcgc > 2:2964334/1‑151 (MQ=255) ccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTCCCGCCGCCACCGTATTcgcg > 2:722190/1‑151 (MQ=255) cgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCgg > 1:968742/1‑151 (MQ=255) cgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCgg > 1:1776776/1‑151 (MQ=255) gccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCCCCGATCACCGTTACCGCCGCCACCGTATTcgcgag > 1:218616/1‑149 (MQ=255) gccACCGTATTCGCGGGTAAACCCGCCCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCggg < 1:668776/151‑1 (MQ=255) gcacccGTATTCGCGGTTCACCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCggg < 2:2304391/147‑1 (MQ=17) ccACCGTTTTCGCGGGTAAGCCCGCTCCTACCCACGCTTCGGGGGTTCGCCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGt < 2:3474243/151‑1 (MQ=17) ccACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGCTCACCTTTCCCGCCTCCACCGTATTCGCTGGCAACCACGCTc > 2:37849/1‑151 (MQ=2) aCCGTATCCGCGGGTAACCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTaa < 1:3027612/151‑1 (MQ=255) tATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAAccc > 1:4642213/1‑151 (MQ=255) tggcgGGTAACCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCt < 1:5148799/149‑1 (MQ=255) cgcgGGTAACCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTc < 1:5330946/151‑1 (MQ=255) cgGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCt < 2:635937/151‑1 (MQ=255) ccGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGcc > 1:608635/1‑150 (MQ=255) gCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATc > 2:1769483/1‑151 (MQ=255) tCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCgg < 1:1331450/151‑1 (MQ=255) tCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCgg > 2:2014527/1‑151 (MQ=255) ccTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCggg > 1:4236981/1‑151 (MQ=255) tccacacGCGTCGGGGGTTGAGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGt < 1:2149016/149‑1 (MQ=255) tACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATc > 1:4656949/1‑146 (MQ=255) acacacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGtt < 1:3720978/151‑1 (MQ=255) acacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCg > 1:1139389/1‑151 (MQ=255) acacGCAGCGGGGGTTCGACACGGGCCGGCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCg < 2:1107741/151‑1 (MQ=255) acGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGc > 2:4538394/1‑151 (MQ=255) gCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGcac > 2:3956321/1‑151 (MQ=255) aTCGGGGGTTGGGCATAGGCCGTGGTAGGTGCGGGTTCCCCCGGGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAg < 1:1877189/151‑1 (MQ=14) aTCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGcaccg > 2:4716357/1‑149 (MQ=255) gggggTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCCGCATCGGGGTTCGGCACAgcgc > 2:3347595/1‑151 (MQ=255) gggggTTCGCCACAGGCCGTCGTAGGAGCGGGTTCACCCCCGACAGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAgcgc < 1:2273626/151‑1 (MQ=255) ggcttCGGCACGGGCCGCCGTACGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGa < 2:2696833/148‑1 (MQ=255) ttCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATgc > 1:4798811/1‑151 (MQ=255) cGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACCGCGCGATgcgc > 2:3068016/1‑151 (MQ=255) ggCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgcc > 2:1907001/1‑151 (MQ=255) ggCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGACGcgcc > 2:460840/1‑151 (MQ=255) gCACAGGCGGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgccg < 2:2899306/151‑1 (MQ=255) gCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgccg < 2:4424382/151‑1 (MQ=255) cacaGGCCGTCGGAGGAGCGGGGTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgccgc < 2:4397557/151‑1 (MQ=255) cggCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCcgcgcg < 1:4391098/150‑1 (MQ=255) aGGCCGTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCcgcgcg < 2:413662/151‑1 (MQ=255) gCCGTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGTCCTGCTAGCCAATCTCCTCCCGCCGTTCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcggg < 1:28758/151‑1 (MQ=14) gCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcggg > 1:172961/1‑151 (MQ=255) cgtcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggcg < 1:3262105/151‑1 (MQ=255) cgtcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCCCCTACACACGCCTCGGGGTGCGGCCCAGCGCGATGCGCCGCgcgggcc > 2:5022585/1‑150 (MQ=18) gtcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCCGCACAGCGCGATGCGCCGCgcgggcgg > 2:3726162/1‑151 (MQ=255) ccgtCGGAGCGGGTACACCCGCGAAGGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGAGCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGggcggc < 2:3587951/150‑1 (MQ=17) ggAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCTCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCg < 1:3025220/151‑1 (MQ=255) gAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGa > 2:233880/1‑151 (MQ=255) gTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTtctc > 1:366487/1‑151 (MQ=255) tCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAg > 1:454970/1‑151 (MQ=255) cccGGGAAAGGGCCGGCCCGGCTGGCCAATCTCCGCCCGCCGTCCACCGTGACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACg < 2:1794991/151‑1 (MQ=21) ccGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGc > 2:3271966/1‑151 (MQ=255) cgcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCCGCGCTCGATTTCTCAGACGcc > 2:1374125/1‑151 (MQ=255) cgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCCTCGGGGCTCGGCACAGCGCGCTGCGCCGCGCGGGCGGCGCTCGATTTCTCCGAccccca > 2:1601217/1‑149 (MQ=18) aaaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGCTTTCTCAGACGCCGACa > 2:2543308/1‑151 (MQ=255) aaaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCCGACGCCGACa > 1:1044387/1‑151 (MQ=255) aaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATTACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCTGAcca > 1:2029407/1‑149 (MQ=255) aaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCCCGATTTCTCAGACGCCGACaa > 2:66360/1‑151 (MQ=255) gggCCGGCCCTGCTGGCCAATCTCCTCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATc < 1:941917/151‑1 (MQ=255) gggCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATc < 1:5190413/151‑1 (MQ=255) gccggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCtt < 1:3384748/151‑1 (MQ=255) ggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACTCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTtcct > 1:4415414/1‑151 (MQ=255) ggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGAGTCGCCAGACGCCGCCAATCTtcct > 2:5055793/1‑151 (MQ=21) ccTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTccc < 1:4368950/151‑1 (MQ=255) ccTGCTGGCCAACCTCCACCCGCCGATCACCGTTCCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTccc < 2:218701/151‑1 (MQ=255) ctgGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGcc > 1:2096855/1‑151 (MQ=255) aaTCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCccac < 1:5076769/151‑1 (MQ=255) aTCTCCACCCGCCGATCACCGTTCCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCccacc < 1:3915375/151‑1 (MQ=255) aTCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCccacc < 1:4538745/151‑1 (MQ=255) tctcCACCCGCCGATCACCGTGGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCccacca < 1:3805996/151‑1 (MQ=255) tcCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACcaca < 1:5256784/151‑1 (MQ=255) ccccGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGct < 2:783281/150‑1 (MQ=255) cccGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGctc < 2:486172/151‑1 (MQ=255) cccGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGctc < 1:3956321/151‑1 (MQ=255) cccGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGctc > 1:1606056/1‑151 (MQ=255) gccgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGctctct > 2:902561/1‑151 (MQ=255) ccgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTg > 1:4839032/1‑151 (MQ=255) cgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGc < 2:1672167/151‑1 (MQ=255) gATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACCATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCa > 2:5177741/1‑151 (MQ=255) gATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTccc < 1:4518283/127‑1 (MQ=255) tCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCaaa < 1:2929416/151‑1 (MQ=255) cccGTTGCCGCCGCCACCGTATTCGCGGGTAACCCCGCTCCTACACACGCATCGGGGTTCGGCACCGCGCGATGCGCCGCGCGGGCGGCGCTCGATTGCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAAtt < 1:2592253/150‑1 (MQ=255) cGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCa < 1:1403505/151‑1 (MQ=255) | CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAT > CP009974/25730‑26037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |