Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,158,307 G→A intergenic (+1830/‑13453) RPPX_05120 → / → RPPX_05130 hypothetical protein/channel protein TolC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,158,3070GA75.5% 542.7 / 207.5 351intergenic (+1830/‑13453)RPPX_05120/RPPX_05130hypothetical protein/channel protein TolC
Reads supporting (aligned to +/- strand):  ref base G (45/40);  new base A (132/130);  total (180/171)
Fisher's exact test for biased strand distribution p-value = 7.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01

Only 100 of 363 total aligned reads displayed.

CCGAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGC  >  CP009974/1158159‑1158457
                                                                                                                                                    |                                                                                                                                                      
ccGAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAact                                                                                                                                                      <  2:1061256/151‑1 (MQ=255)
ccGAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAact                                                                                                                                                      <  1:2233543/151‑1 (MQ=255)
 cGAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAactg                                                                                                                                                     >  2:3449374/1‑151 (MQ=255)
  gAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAactgc                                                                                                                                                    >  2:1006778/1‑151 (MQ=255)
   aaGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAactgct                                                                                                                                                   <  1:434325/151‑1 (MQ=255)
      aCGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGACCTGCTGGa                                                                                                                                                >  1:1828350/1‑151 (MQ=255)
        ggCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACg                                                                                                                                              >  2:4692776/1‑151 (MQ=255)
           agcagcaTCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTgg                                                                                                                                           <  1:1076431/151‑1 (MQ=255)
             cagcaTCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTc                                                                                                                                         <  2:1913213/151‑1 (MQ=255)
                 aTCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCa                                                                                                                                     <  1:446564/151‑1 (MQ=255)
                 aTCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCa                                                                                                                                     >  2:794513/1‑151 (MQ=255)
                     gCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGa                                                                                                                                 >  1:2439999/1‑151 (MQ=255)
                      cGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGAt                                                                                                                                >  2:2596459/1‑151 (MQ=255)
                           ccGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGAcgg                                                                                                                           <  1:769514/151‑1 (MQ=255)
                            cGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGAcggc                                                                                                                          <  2:3818335/151‑1 (MQ=255)
                                 cTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTTGCACTGTGGTCGCTGGCCCCGACGGCCGCTTCCCCCCCACCCTCGACCCGTCCCAGGCCAACGGCCAACTGCTGGACGTGGCCGCCCTCGATGCcgctggctc                                                                                                                     >  2:323932/1‑144 (MQ=14)
                                       gCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTc                                                                                                               <  1:321649/151‑1 (MQ=255)
                                       gCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTc                                                                                                               <  1:4692776/151‑1 (MQ=255)
                                         aCCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGc                                                                                                             >  1:1202931/1‑151 (MQ=255)
                                         aCCCGGGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCGGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGc                                                                                                             <  2:4492858/151‑1 (MQ=255)
                                           ccGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTg                                                                                                           <  2:5158989/151‑1 (MQ=255)
                                            cGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCGCGACCCGGCCCAGACCACCGGCGAACTGCTGGACGCCGTCGCCATCGATGACGTCGGCGGCTCCTCGCTGc                                                                                                          >  1:3482691/1‑151 (MQ=11)
                                             gtgtGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGcc                                                                                                         <  1:59947/151‑1 (MQ=255)
                                               gtgGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCg                                                                                                       >  1:1458473/1‑151 (MQ=255)
                                                 ggAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGca                                                                                                     <  1:300350/151‑1 (MQ=255)
                                                    aGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGCACGTCGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAg                                                                                                  >  1:3568630/1‑151 (MQ=255)
                                                      tGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGAt                                                                                                <  1:1367052/151‑1 (MQ=255)
                                                         aTGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCAc                                                                                             <  1:4178782/151‑1 (MQ=255)
                                                          tGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCAcc                                                                                            >  1:2121664/1‑151 (MQ=255)
                                                             cGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACcgcc                                                                                         >  1:2327006/1‑150 (MQ=255)
                                                              gCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCgcgc                                                                                        >  1:3312812/1‑151 (MQ=255)
                                                                  aCGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGa                                                                                    >  1:2706812/1‑151 (MQ=255)
                                                                    ggCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGAcc                                                                                  >  2:5309066/1‑150 (MQ=255)
                                                                     gCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACAt                                                                                 <  2:4915943/151‑1 (MQ=255)
                                                                       acacTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGCCATcc                                                                               >  1:5339215/1‑150 (MQ=11)
                                                                        cacTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCAc                                                                              <  1:576320/151‑1 (MQ=255)
                                                                             aTTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGccc                                                                         >  1:4025705/1‑151 (MQ=255)
                                                                                ggCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCACCGATGACGCCGGCGTTTCCTCGCTCCCCGCACAGCTCACGGCCCCCAACGTCCCCGCCCCTg                                                                      >  2:202800/1‑151 (MQ=11)
                                                                                   aCTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGGCCACGGCGAACTGCTGGACGTGGCCGCCACGGATGACGGCGGCGTTTCCTCGCTGCCCGCACCGATCACCGCGGCAGACCGCACCGCCCCGGccc                                                                   >  2:3744709/1‑150 (MQ=11)
                                                                                    cTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGc                                                                  <  2:457415/151‑1 (MQ=2)
                                                                                                       cGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCGGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCGCCGCGCCCGACATCGCCGCCCCTGCCGCACCGAGCGAACTGGTGATc                                               <  2:122226/151‑1 (MQ=11)
                                                                                                       cGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATc                                               <  1:4829775/151‑1 (MQ=2)
                                                                                                        ggCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCa                                              >  2:2444191/1‑151 (MQ=14)
                                                                                                        ggCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCa                                              <  2:2386966/151‑1 (MQ=9)
                                                                                                          cAGGTTCCCCGTCACCCTCCACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAAt                                            <  2:4965719/151‑1 (MQ=11)
                                                                                                          cAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAAt                                            <  1:797285/151‑1 (MQ=9)
                                                                                                            gCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGCTCAATGc                                          >  2:734549/1‑151 (MQ=9)
                                                                                                            gCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGc                                          <  1:681981/151‑1 (MQ=255)
                                                                                                            gCTTCACCGTCAACCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGc                                          <  1:871695/151‑1 (MQ=9)
                                                                                                             cTTCACGGTCACCCTCTACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAAAACACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGcc                                         <  1:1266102/151‑1 (MQ=11)
                                                                                                             cTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGcc                                         <  2:1554207/151‑1 (MQ=14)
                                                                                                              ttCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCg                                        <  1:5007453/151‑1 (MQ=12)
                                                                                                               tCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGa                                       >  2:2877176/1‑151 (MQ=14)
                                                                                                               tCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGa                                       >  1:2378537/1‑151 (MQ=9)
                                                                                                                cACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGAc                                      <  1:3704626/151‑1 (MQ=12)
                                                                                                                 aCCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACg                                     >  2:4004900/1‑151 (MQ=9)
                                                                                                                 aCCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACg                                     >  1:5146358/1‑151 (MQ=9)
                                                                                                                   cGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGc                                   >  1:2833295/1‑151 (MQ=12)
                                                                                                                    gTCACCCTCGGCCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCa                                  <  2:2176745/151‑1 (MQ=255)
                                                                                                                    gTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCa                                  >  2:265022/1‑151 (MQ=255)
                                                                                                                       aCCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCg                               >  1:3878582/1‑151 (MQ=9)
                                                                                                                        cccTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGt                              >  1:4749580/1‑151 (MQ=9)
                                                                                                                         ccTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTg                             <  1:1598300/151‑1 (MQ=255)
                                                                                                                           tCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGt                           >  1:1004062/1‑151 (MQ=255)
                                                                                                                            cGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGACCTGGTGATCAATGCCGCCGGCACCGTGGTc                          >  2:3630712/1‑151 (MQ=11)
                                                                                                                            cGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTc                          >  2:581769/1‑151 (MQ=14)
                                                                                                                             gACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCa                         <  2:164321/151‑1 (MQ=9)
                                                                                                                             gACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCa                         >  2:222297/1‑151 (MQ=9)
                                                                                                                             gACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCa                         <  1:3122848/151‑1 (MQ=255)
                                                                                                                             gACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGCCCGCGCTGGCGCCCAACGCCGACGGCGGCGTggccc                         >  2:4789105/1‑148 (MQ=11)
                                                                                                                                ccGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCg                      >  1:1688169/1‑151 (MQ=255)
                                                                                                                                 cggcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGATCTGGTGATCAATGCCGACGGCAGCGTGGTCACCgg                     >  2:3264885/6‑151 (MQ=9)
                                                                                                                                 cggcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCgg                     <  2:887479/146‑1 (MQ=12)
                                                                                                                                 cGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCgg                     <  2:302461/151‑1 (MQ=12)
                                                                                                                                 cGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCgg                     <  2:2820720/151‑1 (MQ=12)
                                                                                                                                  gCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCTCCGACCGAGCTGGTGCTCAATGCCGACGGCACAGCGGTCACCGGc                    >  2:1473538/1‑151 (MQ=11)
                                                                                                                                  cgcacaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGc                    <  2:1350824/144‑1 (MQ=11)
                                                                                                                                   gcacaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc                   <  1:4890909/145‑1 (MQ=11)
                                                                                                                                   ccccAGACCAACGGCGAACTGCTGGACGTGGTCACCATCGATGACGGCGGCGTTTCCGCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc                   <  1:2576108/148‑1 (MQ=255)
                                                                                                                                   ccTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc                   >  2:3873634/1‑151 (MQ=14)
                                                                                                                                   ccTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc                   <  2:2276024/151‑1 (MQ=12)
                                                                                                                                     ccgagCCAACGGCCAACTGCTGGACGTGGGCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCGGCGATCACGGCGCCCGACATCACCGCCCCTGCCGCGCCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGt                 <  2:4412945/147‑1 (MQ=11)
                                                                                                                                     ccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCgc                 <  1:3449374/150‑2 (MQ=14)
                                                                                                                                     ccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCACCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACCGCAGCGTGGTCACCGGCCgc                 >  2:1799088/2‑150 (MQ=9)
                                                                                                                                     acaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGt                 <  1:4292353/147‑1 (MQ=255)
                                                                                                                                      cAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCgcg                <  2:1158183/151‑3 (MQ=9)
                                                                                                                                       aagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc               <  1:4572482/149‑1 (MQ=255)
                                                                                                                                       aagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc               >  1:3394352/3‑151 (MQ=255)
                                                                                                                                       aGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGCTGATCAATGCCGACGGCCGCGTGGTCACCGCCCGTGc               >  2:4062057/1‑151 (MQ=255)
                                                                                                                                       aGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCgcgc               >  1:4169610/1‑148 (MQ=255)
                                                                                                                                        ggCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGcc              >  2:3691411/1‑151 (MQ=18)
                                                                                                                                        ggCCAACGGCGAGCTGCTGGACGTGGTCGCCAGCGATGACGGCGGCGGTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGcc              <  2:4298271/151‑1 (MQ=255)
                                                                                                                                           cAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGaa           <  2:4185445/151‑1 (MQ=19)
                                                                                                                                           cAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGaa           <  2:3559233/151‑1 (MQ=255)
                                                                                                                                            aaCGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGCAc          >  2:2995783/1‑151 (MQ=255)
                                                                                                                                             aCGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAAcc         <  2:273414/151‑1 (MQ=255)
                                                                                                                                              cGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGCGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCg        >  2:2786096/1‑151 (MQ=255)
                                                                                                                                              cGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCg        <  1:2027743/151‑1 (MQ=18)
                                                                                                                                                   aGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgcag   >  2:3571112/1‑151 (MQ=19)
                                                                                                                                                   aGCGGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgcag   <  2:5333364/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
CCGAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGC  >  CP009974/1158159‑1158457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑