Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,174,412 A→G D407G (GAT→GGT)  RPPX_05135 → ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,174,4120AG100.0% 911.2 / NA 259D407G (GAT→GGT) RPPX_05135ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (135/124);  total (135/124)

Only 100 of 259 total aligned reads displayed.

ATCCAGGGCCTGGACGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGATGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGCTGACCCGCTGGCA  >  CP009974/1174264‑1174559
                                                                                                                                                    |                                                                                                                                                   
aTCCAGGGCCTGGACGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTg                                                                                                                                                   <  1:4420888/151‑1 (MQ=255)
aTCCAGGGCCTGGACGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTg                                                                                                                                                   <  1:2368233/151‑1 (MQ=255)
    aGGGCCTGGACGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCgt                                                                                                                                               <  1:2513923/151‑1 (MQ=255)
     gggCCTGGACGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCgtg                                                                                                                                              >  1:233266/1‑151 (MQ=255)
          agaaCGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGc                                                                                                                                         <  2:4095796/148‑1 (MQ=255)
            gACGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCg                                                                                                                                       >  1:820369/1‑151 (MQ=255)
             aCGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGt                                                                                                                                      <  2:2336672/151‑1 (MQ=255)
              cGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACACCGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTg                                                                                                                                     <  1:1845823/151‑1 (MQ=255)
                ggatccgggCACTGGTGGCAGAGGTGCGCTTCGAACGCCAGTGGCAGCGGTTCAGCGCGGTCTGCGAGCACCCCGACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGt                                                                                                                                   <  2:3869587/144‑1 (MQ=255)
                agaTCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGt                                                                                                                                   >  1:3615307/1‑151 (MQ=255)
                   tCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCAt                                                                                                                                >  1:2029816/1‑151 (MQ=255)
                     aaGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCg                                                                                                                              >  2:1184756/1‑151 (MQ=255)
                      aGGCACTGCAGGCAGAGGCCCGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGGCCGGGCCGCAGAACGTGCAGGGTGCCGTCATTGCCGTGGGCACCGt                                                                                                                             >  2:4786983/1‑151 (MQ=255)
                       ggCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTg                                                                                                                            >  1:1063090/1‑151 (MQ=255)
                       ggCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTg                                                                                                                            <  2:5117872/151‑1 (MQ=255)
                        gCACTGGAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAGCCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGa                                                                                                                           <  2:2123769/151‑1 (MQ=255)
                        gCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGa                                                                                                                           >  1:400512/1‑151 (MQ=255)
                         cACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGCGTTTGCCGTGGTCATCGTGAt                                                                                                                          >  2:3980244/1‑151 (MQ=255)
                           cTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCg                                                                                                                        >  2:2773464/1‑151 (MQ=255)
                            tGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCgg                                                                                                                       >  1:2647447/1‑151 (MQ=255)
                             gcaggcagAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGgc                                                                                                                      >  1:597021/1‑151 (MQ=255)
                                ggcagAGGCACGCTTCGAACGACAGGGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGcc                                                                                                                   <  2:38333/151‑1 (MQ=255)
                                  cagAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGCTCGGCGcccc                                                                                                                 >  2:3020513/1‑151 (MQ=255)
                                   agagGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGccccc                                                                                                                >  1:1403851/1‑151 (MQ=255)
                                   agagGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGccccc                                                                                                                >  1:1103230/1‑151 (MQ=255)
                                   agagGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGccccc                                                                                                                <  1:2818503/151‑1 (MQ=255)
                                      ggCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATg                                                                                                             >  1:4201986/1‑151 (MQ=255)
                                       gCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATgg                                                                                                            <  2:2407568/151‑1 (MQ=255)
                                       gCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATgg                                                                                                            <  1:4148369/151‑1 (MQ=255)
                                         aCGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTc                                                                                                          <  2:161870/151‑1 (MQ=255)
                                          cGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCCTGGTcc                                                                                                         >  2:1723068/1‑150 (MQ=255)
                                          cGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCa                                                                                                         >  2:43632/1‑151 (MQ=255)
                                          cGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCa                                                                                                         >  2:4427999/1‑151 (MQ=255)
                                          cGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGCTCa                                                                                                         >  1:4385370/1‑151 (MQ=255)
                                           gCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCAt                                                                                                        >  2:3791389/1‑151 (MQ=255)
                                            cTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATc                                                                                                       >  2:1596144/1‑151 (MQ=255)
                                               cGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGcc                                                                                                    >  2:3635018/1‑151 (MQ=255)
                                                gAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCg                                                                                                   <  2:1772435/151‑1 (MQ=255)
                                                 aaCGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCgg                                                                                                  <  1:3402682/151‑1 (MQ=255)
                                                 aaCGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCgg                                                                                                  >  1:798366/1‑151 (MQ=255)
                                                 aaCGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCgg                                                                                                  <  1:5366915/151‑1 (MQ=255)
                                                  aCGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCGCCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGc                                                                                                 <  2:5342959/151‑1 (MQ=255)
                                                  aCGACAGTAGAACCAAAACAACGCGGCATACGCGCACACCAACCAGCGCCTGCGCACCCTCACCAACGTCCTGATGACCTAGAAGCAAAACGAGCAGGGTGCCGAATTTGCCGATGTCATCGAAATCGGCGCCCCCAAGGTAATCGCCGGc                                                                                                 <  2:2571687/151‑1 (MQ=255)
                                                    gACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGCCATCGTGATCGGCGCCCCCATGGTCATCGCCCGCGa                                                                                               >  2:2976018/1‑151 (MQ=255)
                                                      cAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGAcc                                                                                             <  2:3758975/151‑1 (MQ=255)
                                                       aGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCt                                                                                            <  2:2020049/151‑1 (MQ=255)
                                                             aCCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTcaccac                                                                                      <  2:1280142/151‑1 (MQ=255)
                                                                 gTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGt                                                                                  >  1:3096476/1‑151 (MQ=255)
                                                                  tACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGCCGCCCCCATGGCCATCGCCGCCGACCTCCCCACgggcc                                                                                 >  2:1708418/1‑149 (MQ=255)
                                                                   aCAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGACGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAg                                                                                >  1:4912746/1‑151 (MQ=255)
                                                                     aaCGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGTGACCTCACCACGGGTAGcc                                                                              >  1:347915/1‑151 (MQ=255)
                                                                      aCGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCt                                                                             <  1:3801731/151‑1 (MQ=255)
                                                                      aCGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCt                                                                             >  2:2112810/1‑151 (MQ=255)
                                                                       cgcgGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCtg                                                                            <  2:3185209/151‑1 (MQ=255)
                                                                          ggCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCtggtg                                                                         <  2:824125/151‑1 (MQ=255)
                                                                          ggCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCtggtg                                                                         >  1:637212/1‑151 (MQ=255)
                                                                          ggCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCtggtg                                                                         <  1:2949657/151‑1 (MQ=255)
                                                                             cTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGAAGCCTCGTggcg                                                                      >  1:2742047/1‑151 (MQ=255)
                                                                              tGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTggcgg                                                                     >  1:3236922/1‑151 (MQ=255)
                                                                              tGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTggcgg                                                                     >  1:4600722/1‑151 (MQ=255)
                                                                                cgcgcACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCa                                                                   <  1:4036738/151‑1 (MQ=255)
                                                                                 gcgcACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCAt                                                                  >  1:3162009/1‑151 (MQ=255)
                                                                                       acCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGc                                                            <  1:3777526/151‑1 (MQ=255)
                                                                                        ccAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCt                                                           >  1:4549608/1‑151 (MQ=255)
                                                                                         cAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGCAGCCTGGTGGCGGCATCCATGCtt                                                          >  2:294182/1‑151 (MQ=255)
                                                                                          aaCCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCttt                                                         <  1:524239/151‑1 (MQ=255)
                                                                                           aCCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTc                                                        <  2:3550373/151‑1 (MQ=255)
                                                                                           aCCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTc                                                        >  2:1807190/1‑151 (MQ=255)
                                                                                           aCCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTc                                                        >  2:5079354/1‑151 (MQ=255)
                                                                                           aCCTCCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTc                                                        >  2:142418/1‑151 (MQ=255)
                                                                                            cctgcgcctgcgCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCa                                                       <  1:4291551/151‑1 (MQ=255)
                                                                                            cctgcgcctgcgCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCa                                                       <  1:5382560/151‑1 (MQ=255)
                                                                                                cgcctgcgcACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATcgc                                                   <  1:5093169/151‑1 (MQ=255)
                                                                                                  cctgcgcACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCgg                                                 >  1:1611231/1‑151 (MQ=255)
                                                                                                    tgcgcACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGgat                                               <  2:1858553/151‑1 (MQ=255)
                                                                                                      cgcACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGgatga                                             >  1:924591/1‑151 (MQ=255)
                                                                                                      cgcACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGgatga                                             <  1:51886/151‑1 (MQ=255)
                                                                                                      cgcACCCTCACCAACGGCCTGGTGACCTGGACACAGAACGTGAAGGGTGCCGGGTGTGCCGTGGTATGCGTGATCCGCGCCACCATGGTCATCGCAGGCGACCTCAGCACAGGCAGGCGGGGCGCCGCAACAATGCGTTCCGCGCGgttgc                                             >  2:4471282/1‑150 (MQ=255)
                                                                                                        cACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGatgatg                                           >  1:2083344/1‑151 (MQ=255)
                                                                                                        cACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGatgatg                                           >  1:1698070/1‑151 (MQ=255)
                                                                                                           ccTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGgcg                                        <  1:1760343/151‑1 (MQ=255)
                                                                                                            cTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGgcgc                                       <  2:4121099/151‑1 (MQ=255)
                                                                                                                ccAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCt                                   >  2:5207464/1‑151 (MQ=255)
                                                                                                                 cAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTg                                  <  1:3844055/151‑1 (MQ=255)
                                                                                                                    cGGCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGcc                               <  1:409036/151‑1 (MQ=255)
                                                                                                                      gCCTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCa                             >  1:1165168/1‑151 (MQ=255)
                                                                                                                       ccTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAg                            <  1:1534939/151‑1 (MQ=255)
                                                                                                                        cTGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGc                           <  1:4933624/151‑1 (MQ=255)
                                                                                                                         tGGTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCt                          >  1:1001756/1‑151 (MQ=255)
                                                                                                                          ggTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTg                         >  1:4902023/1‑151 (MQ=255)
                                                                                                                          ggTGACCTGGACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTg                         >  1:5030524/1‑151 (MQ=255)
                                                                                                                                   gACGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCAtgtg                <  1:3367153/151‑1 (MQ=255)
                                                                                                                                    aCGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGc               <  1:5304865/151‑1 (MQ=255)
                                                                                                                                    aCGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGc               <  2:1545219/151‑1 (MQ=255)
                                                                                                                                     cGCAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGCt              <  1:181134/151‑1 (MQ=255)
                                                                                                                                       cAGAACGTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGCTGa            >  1:1326630/1‑151 (MQ=255)
                                                                                                                                         gAACGTGCAGGGTGCCGTGTTTGCCGGTGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGCTGAcc          <  2:3281476/151‑1 (MQ=255)
                                                                                                                                             gTGCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGCTGACCCGCt      <  2:5030524/151‑1 (MQ=255)
                                                                                                                                               gCAGGGTGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGCCCCATGTGCTGACCCGCTgg    >  2:4638985/1‑151 (MQ=255)
                                                                                                                                                 aGGGTGCGGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGCTGACCCGCTGgca  <  2:3331983/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ATCCAGGGCCTGGACGAGATCAAGGCACTGCAGGCAGAGGCACGCTTCGAACGACAGTGGAACCAGTACAACGCGGCCTGCGCGCACACCAACCTGCGCCTGCGCACCCTCACCAACGGCCTGGTGACCTGGACGCAGAACGTGCAGGATGCCGTGTTTGCCGTGGTCATCGTGATCGGCGCCCCCATGGTCATCGCCGGCGACCTCACCACGGGTAGCCTGGTGGCGGCATCCATGCTTTCATCGCGGATGATGGCGCCGCTGGCCCAGCTGACCCATGTGCTGACCCGCTGGCA  >  CP009974/1174264‑1174559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑