Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,247,078 G→C intergenic (‑212/‑599) RPPX_05495 ← / → RPPX_05500 glutamyl‑tRNA reductase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,247,0780GC100.0% 530.7 / NA 154intergenic (‑212/‑599)RPPX_05495/RPPX_05500glutamyl‑tRNA reductase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (65/89);  total (65/89)

Only 100 of 164 total aligned reads displayed.

ACCGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGT  >  CP009974/1246930‑1247226
                                                                                                                                                    |                                                                                                                                                    
accGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcag                                                                                                                                                    <  2:4337130/151‑1 (MQ=255)
  cGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcaggg                                                                                                                                                  <  2:1299944/151‑1 (MQ=255)
   gTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcaggga                                                                                                                                                 >  2:448069/1‑151 (MQ=255)
     tCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGcagggagg                                                                                                                                               <  2:2473711/151‑1 (MQ=255)
       gCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTg                                                                                                                                             >  2:2212277/1‑151 (MQ=255)
       gCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTg                                                                                                                                             <  2:399622/151‑1 (MQ=255)
          tttGTGCTGTTAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGTGCTTGCGGTGTTTTCAGGTCTTGCAGGCTTTTGTTCTGGCTTTTGATCCTGCCCTTGATCTTCGCGACTTCAGGTGGCCGAACGCTGGCCTTGCGCAGGGAGGTGACg                                                                                                                                          <  2:1535005/150‑1 (MQ=25)
            tgtgCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACggg                                                                                                                                        >  2:1468062/1‑151 (MQ=255)
               gCTGATAGTGCTGCGGCTATCGCCTTTTCGTGGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGACCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGTCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCAt                                                                                                                                     <  2:4259146/151‑1 (MQ=25)
                 tGATAGTCCTGCTGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGCTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATgg                                                                                                                                   <  1:1140485/151‑1 (MQ=255)
                  gagaggccTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGa                                                                                                                                  <  2:5341967/145‑1 (MQ=255)
                   aTAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGAt                                                                                                                                 <  1:3399279/151‑1 (MQ=255)
                   aTAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGAt                                                                                                                                 <  1:4667905/151‑1 (MQ=255)
                    tAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATg                                                                                                                                <  1:2082358/151‑1 (MQ=255)
                     aGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGACCGCAGGCCTTGCGCAGGGAGGTGCCGGGCATGGATGc                                                                                                                               >  2:2356880/1‑151 (MQ=255)
                     aGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGc                                                                                                                               >  1:3307053/1‑151 (MQ=255)
                       tCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGccc                                                                                                                             >  2:2927397/1‑151 (MQ=255)
                         cTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGt                                                                                                                           >  1:1184339/1‑151 (MQ=255)
                          tGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGCCGGGCATGGATGCCCGTc                                                                                                                          >  1:4901585/1‑151 (MQ=255)
                          tGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTc                                                                                                                          <  1:3288044/151‑1 (MQ=255)
                           gCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCa                                                                                                                         >  2:4017497/1‑151 (MQ=255)
                             ggCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCGTGCGCGGGGAGGTGACGGGCATGGATGCCCGTCCAg                                                                                                                       >  2:602710/1‑151 (MQ=255)
                               cTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAgcg                                                                                                                     >  1:1829238/1‑151 (MQ=255)
                                  tCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCtt                                                                                                                  >  2:1421777/1‑150 (MQ=255)
                                     ccTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCTGTCAAGCGCTgtgc                                                                                                               >  2:5264517/1‑148 (MQ=255)
                                     ccTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgtgc                                                                                                               >  1:2914385/1‑148 (MQ=255)
                                      cTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgtgcc                                                                                                              <  2:2787839/151‑5 (MQ=255)
                                        tttCGTAGCCAGCCGTCGCGGTGCTTTCACGTATTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTCGATCTTAGCGACTTCAGGAGACCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgtgcacc                                                                                                            <  2:1987062/151‑7 (MQ=17)
                                         ttCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgttcccca                                                                                                           >  2:2132473/1‑144 (MQ=255)
                                         ttCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgtgcccca                                                                                                           <  2:4882610/151‑8 (MQ=255)
                                            gTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGa                                                                                                       <  1:2507516/151‑1 (MQ=255)
                                            gTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGa                                                                                                       <  1:3369115/151‑1 (MQ=255)
                                             tAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGAt                                                                                                      <  2:205221/151‑1 (MQ=255)
                                              aGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATg                                                                                                     <  2:5027315/151‑1 (MQ=255)
                                                   gCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGcc                                                                                                >  1:2421927/1‑151 (MQ=255)
                                                     ccTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCTTCAAGCGCTG‑TGCCCCAGGATGGGGCCTg                                                                                              <  2:3203422/151‑1 (MQ=17)
                                                     ccTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTg                                                                                              >  1:5341382/1‑151 (MQ=255)
                                                     ccTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTg                                                                                              <  1:703039/151‑1 (MQ=255)
                                                       tAGCGGTGCTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACCTCAGGCGGCCGAACGCAGGCCTTGCGCAGGGCGGTGACTGGCATGGGTGCTCGTTAAGCGCTG‑TGCCCCAGGATGGGGCCGGCa                                                                                            >  1:1059320/1‑151 (MQ=17)
                                                         gCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAgc                                                                                          <  1:710806/151‑1 (MQ=255)
                                                           ggTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACTGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAgcgc                                                                                        >  1:489008/1‑151 (MQ=255)
                                                            gtgtTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGcgcg                                                                                       <  1:1468062/151‑1 (MQ=255)
                                                               ttttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtc                                                                                    <  1:2132210/151‑1 (MQ=255)
                                                                tttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtcc                                                                                   <  1:4424625/151‑1 (MQ=255)
                                                                 ttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtcct                                                                                  <  2:1407888/151‑1 (MQ=255)
                                                                  tCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtcctc                                                                                 <  1:3805016/151‑1 (MQ=255)
                                                                     ggTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCg                                                                              <  1:1409134/151‑1 (MQ=255)
                                                                      gTCTTGCGGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATAGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCgg                                                                             <  1:4338845/151‑1 (MQ=14)
                                                                      gTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCCTCAAGCGCCG‑TACCCCAGGAGGGGGCCTGCAGCGGGGTCATCCCgg                                                                             >  2:385223/1‑151 (MQ=17)
                                                                      gTCTTGCCGGCGTGTGAGCTTGCTTTTGAGCCTGACCTTGATCGTCGCGACTGCAGGAGGCCGAACGCAGGCCTTGCGCAGGGGGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCgg                                                                             <  2:3502337/151‑1 (MQ=14)
                                                                         ttGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAg                                                                          >  1:2625853/1‑151 (MQ=255)
                                                                           gCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCa                                                                        <  1:1396880/151‑1 (MQ=255)
                                                                            ccGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCaa                                                                       >  1:1823795/1‑151 (MQ=255)
                                                                             cGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAg                                                                      >  2:2609657/1‑151 (MQ=255)
                                                                              ggCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGc                                                                     <  2:3114006/151‑1 (MQ=255)
                                                                                cTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGccc                                                                   <  2:5404264/151‑1 (MQ=255)
                                                                                  tttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTa                                                                 <  1:2844194/151‑1 (MQ=255)
                                                                                  tttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTa                                                                 <  1:998290/151‑1 (MQ=255)
                                                                                    tGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACg                                                               <  2:1912662/151‑1 (MQ=255)
                                                                                    tGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACg                                                               <  1:798297/151‑1 (MQ=255)
                                                                                      aTCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCt                                                             <  2:599808/151‑1 (MQ=255)
                                                                                       tCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTc                                                            >  2:1811167/1‑151 (MQ=255)
                                                                                       tCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTc                                                            <  1:1369835/151‑1 (MQ=255)
                                                                                       tCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTc                                                            <  1:4803807/151‑1 (MQ=255)
                                                                                        cTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCg                                                           <  2:1841650/151‑1 (MQ=255)
                                                                                         tGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCgg                                                          >  2:5037410/1‑151 (MQ=255)
                                                                                          ggCTTTTGATCCTGACCTTGATCTGCGCGACTTCAGGAGGCCGAACGCAGGCCTGGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGc                                                         <  2:4328851/151‑1 (MQ=17)
                                                                                             ttttGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGcctc                                                      >  1:256674/1‑151 (MQ=255)
                                                                                               ttGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGcctcct                                                    <  2:136358/151‑1 (MQ=255)
                                                                                               ttGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGcctcct                                                    <  2:3066827/151‑1 (MQ=255)
                                                                                               ttGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGcctcct                                                    <  2:2591462/151‑1 (MQ=255)
                                                                                               ttGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGcctcct                                                    <  1:4978177/151‑1 (MQ=255)
                                                                                                tGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTg                                                   >  1:2038720/1‑151 (MQ=255)
                                                                                                tGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTg                                                   >  1:2038875/1‑151 (MQ=255)
                                                                                                 gATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGACCGTCAAGCGC‑GGTGCCCCAGGATGGGGCCTGCAGCGCGGTCGTCCCGGGAGAAAGCCCTACGGTCTGcctcgaga                                                  >  2:766394/1‑147 (MQ=14)
                                                                                                         ggatgggcTTCCCGACGGCAGGAGGCCCAACGACGGCCTGGCGCAGGGGGGGGACGGGCGGGGATGCCCGGGAGGCGCTG‑TGCCGCCGGATGGGGCCCGCAGTGAGGTCCTCCGGGGAGGAAGCCCTACGCTCGGCCTCCTGAGGTCGCaa                                          <  2:4570128/144‑1 (MQ=255)
                                                                                                           ttGATCTTCGCGACTTCAGGAGTCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGAAGCAAGCCCTCCGCTCGGCCTCCTGACGTCGCAATc                                        >  2:153818/1‑151 (MQ=17)
                                                                                                           ttGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATc                                        >  2:1767677/1‑151 (MQ=255)
                                                                                                            ggATCTCCGCGACTGCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGGCTCCTGAAGTCGCAATCt                                       <  2:2899481/150‑1 (MQ=17)
                                                                                                             gATCTTCGCGACTTCAGGAGGCCTAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGTTCGGCCTTCTGAAGTCGCAATCtc                                      >  2:536571/1‑150 (MQ=17)
                                                                                                             gATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTg                                      <  1:4322304/151‑1 (MQ=255)
                                                                                                               tCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCa                                    <  1:1593604/151‑1 (MQ=255)
                                                                                                                 ttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAgc                                  >  1:4727768/1‑151 (MQ=255)
                                                                                                                 ttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAgc                                  <  2:1969010/151‑1 (MQ=255)
                                                                                                                        cTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTgct                           >  2:2617268/1‑149 (MQ=255)
                                                                                                                          tCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCa                         >  1:1421117/1‑151 (MQ=255)
                                                                                                                           cAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCaa                        <  2:2477610/151‑1 (MQ=255)
                                                                                                                              gaggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAAccc                     >  2:2310741/1‑150 (MQ=255)
                                                                                                                              gaggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACcg                     >  1:1483431/1‑151 (MQ=255)
                                                                                                                                    gAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCt               >  2:3264678/1‑151 (MQ=255)
                                                                                                                                        gCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGa           >  2:1680974/1‑151 (MQ=255)
                                                                                                                                        gCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGa           >  2:162799/1‑151 (MQ=255)
                                                                                                                                          aGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAg         >  1:1779953/1‑151 (MQ=255)
                                                                                                                                          aGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAg         >  1:506578/1‑151 (MQ=255)
                                                                                                                                             ccTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGa      >  2:1859263/1‑151 (MQ=255)
                                                                                                                                              cTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGAc     <  2:133430/151‑1 (MQ=255)
                                                                                                                                                tGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAg   >  1:683590/1‑151 (MQ=255)
                                                                                                                                                tGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAg   >  1:2100806/1‑151 (MQ=255)
                                                                                                                                                 gcgcAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGt  >  2:2072787/1‑151 (MQ=255)
                                                                                                                                                 gcgcAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGt  >  1:2180957/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
ACCGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGT  >  CP009974/1246930‑1247226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑