BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	1,358,374	G→T	intergenic (+235/+2455)	RPPX_05970 → / ← RPPX_05980	hypothetical protein/tRNA‑Thr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	1,358,374	0	G	T	100.0%	702.3 / NA	240	intergenic (+235/+2455)	RPPX_05970/RPPX_05980	hypothetical protein/tRNA‑Thr
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (130/110); total (130/110)

Only 100 of 241 total aligned reads displayed.

AGCGCCAATTATAAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCGGGACTGGCGGCTCCTTACGTCCGGGAGCAAGGGCATCTCATGATCTGGCCTCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGA  >  CP009974/1358227‑1358521

aGCGCCAATTATAAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGa                                                                                                                                                  <  2:2886326/151‑1 (MQ=255)

  cgcCAATTATAAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACt                                                                                                                                                <  2:799237/151‑1 (MQ=255)

   gcCAATTATAAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTg                                                                                                                                               >  2:4021744/1‑151 (MQ=255)

   gcCAATTATAAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTg                                                                                                                                               <  2:2173081/151‑1 (MQ=255)

    ccAATTATAAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTgg                                                                                                                                              >  1:2143807/1‑151 (MQ=255)

      aaTTATAAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTggcg                                                                                                                                            >  1:907183/1‑151 (MQ=255)

         tataAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCt                                                                                                                                         >  1:3655181/1‑151 (MQ=255)

          ataAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCACTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTc                                                                                                                                        >  1:4089095/1‑151 (MQ=255)

            aaaTCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCt                                                                                                                                      <  2:3023354/151‑1 (MQ=255)

            aaaTCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCt                                                                                                                                      >  1:2352823/1‑151 (MQ=255)

             aaTCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCtt                                                                                                                                     >  1:1878873/1‑151 (MQ=255)

             aaTCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCtt                                                                                                                                     <  2:2805366/151‑1 (MQ=255)

              aTCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTa                                                                                                                                    >  2:3893716/1‑151 (MQ=255)

                cTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTaag                                                                                                                                  <  1:2717639/151‑3 (MQ=255)

                  aCGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTaagac                                                                                                                                <  2:5116734/151‑5 (MQ=255)

                   cGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTATGCTGGAGTGGCGGCTCCTTaagacc                                                                                                                               >  1:5157826/1‑146 (MQ=255)

                    gCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCg                                                                                                                              >  2:4531567/1‑151 (MQ=255)

                    gCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCg                                                                                                                              <  2:1358372/151‑1 (MQ=255)

                    gCATTCATCGCATTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTaagaccg                                                                                                                              <  2:4438253/151‑7 (MQ=255)

                     cATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCgg                                                                                                                             >  1:1668729/1‑151 (MQ=255)

                          aTCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCa                                                                                                                        >  1:3891582/1‑151 (MQ=255)

                          aTCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCa                                                                                                                        >  2:157344/1‑151 (MQ=255)

                           tCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCaa                                                                                                                       <  2:2580552/151‑1 (MQ=255)

                              cTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAggg                                                                                                                    <  2:2522407/151‑1 (MQ=255)

                                  cAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCAtc                                                                                                                >  2:4571780/1‑151 (MQ=255)

                                    aaTATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCAtctc                                                                                                              >  1:409135/1‑151 (MQ=255)

                                       atCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATg                                                                                                           <  1:103128/151‑1 (MQ=255)

                                        tCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTTAGTCCGGGAGCAAGGGCATCTCATGa                                                                                                          <  2:4579169/151‑1 (MQ=255)

                                          gCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATc                                                                                                        <  1:5270200/151‑1 (MQ=255)

                                            aaCTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGCGCAAGGGCATCTCATGATCTg                                                                                                      >  1:4811779/1‑151 (MQ=255)

                                              cTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGc                                                                                                    >  1:2063370/1‑151 (MQ=255)

                                               ttCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGct                                                                                                   >  2:1155704/1‑150 (MQ=255)

                                               ttCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGct                                                                                                   >  1:4534147/1‑150 (MQ=255)

                                               ttCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGct                                                                                                   >  1:5345635/1‑150 (MQ=255)

                                                 cAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGctcc                                                                                                 >  2:3537511/1‑148 (MQ=255)

                                                    cATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCACCTCATGATCTGGCTCCCTg                                                                                              >  1:307644/1‑151 (MQ=255)

                                                     aTTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGa                                                                                             >  2:1558887/1‑151 (MQ=25)

                                                     aTTCAGCCGATGATATCCTCCCAAGATCTAGTCCTAGCACAGACCTCAGATATAGATCACGTCACCTGCTACCTTTGGGACATGTCCTCTCCCCTGGACTGCCAGCTCCTTAAGCCCGGGAGCAGGTGCATCTCCGGATCTGGCTCCCTgg                                                                                             >  2:5386131/1‑150 (MQ=255)

                                                      ttGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAg                                                                                            >  1:4737321/1‑151 (MQ=25)

                                                       tGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGc                                                                                           >  2:162108/1‑151 (MQ=25)

                                                        gAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCGGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCTCTGAGCa                                                                                          >  1:548798/1‑151 (MQ=25)

                                                          gCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCAcc                                                                                        <  1:3862425/151‑1 (MQ=25)

                                                           ccAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCg                                                                                       >  2:5128035/1‑151 (MQ=21)

                                                            cAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGt                                                                                      <  2:4645636/151‑1 (MQ=21)

                                                            cAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGt                                                                                      >  1:128629/1‑151 (MQ=21)

                                                             aaTGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGtt                                                                                     >  1:5293095/1‑151 (MQ=21)

                                                               tGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTAc                                                                                   >  1:2549103/1‑151 (MQ=21)

                                                                  gTTCCTCCCAAGCTCTAGTCCTAGCACAGACCTTGTTTAGGGACCAAGGCACCTGCGACCTGTGGGAAATGTCCTCTCCGCTGGTCTGGCGGCTCCGTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCgg                                                                                <  2:3453528/151‑1 (MQ=18)

                                                                   ttCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGt                                                                               <  1:425608/151‑1 (MQ=21)

                                                                    tcctccCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTg                                                                              >  1:3679288/1‑151 (MQ=21)

                                                                      ctccCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTggg                                                                            <  2:5330639/151‑1 (MQ=21)

                                                                      ctccCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTggg                                                                            <  2:933156/151‑1 (MQ=21)

                                                                        cccAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCCAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCg                                                                          >  2:4986030/1‑151 (MQ=255)

                                                                        cccAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCg                                                                          >  1:1057055/1‑151 (MQ=21)

                                                                            aGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTg                                                                      >  1:767258/1‑151 (MQ=18)

                                                                              aTCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGa                                                                    >  2:1393685/1‑151 (MQ=18)

                                                                              aTCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGa                                                                    <  2:907288/151‑1 (MQ=18)

                                                                               tCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAg                                                                   <  1:90424/151‑1 (MQ=18)

                                                                                  aGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCt                                                                >  1:1851252/1‑151 (MQ=18)

                                                                                  aGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCt                                                                >  1:2381333/1‑151 (MQ=18)

                                                                                  aGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCt                                                                >  1:420882/1‑151 (MQ=18)

                                                                                     ccTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCa                                                             >  1:1044571/1‑151 (MQ=18)

                                                                                     ccTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCa                                                             <  1:922314/151‑1 (MQ=18)

                                                                                     ccTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCa                                                             >  1:3253360/1‑151 (MQ=18)

                                                                                       tAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCAtt                                                           >  1:2001268/1‑151 (MQ=18)

                                                                                       tAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCAtt                                                           <  1:5082637/151‑1 (MQ=18)

                                                                                         gCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTgg                                                         >  2:4917852/1‑151 (MQ=18)

                                                                                             aGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGa                                                     <  1:2438974/151‑1 (MQ=17)

                                                                                              gACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGAc                                                    <  2:4537048/151‑1 (MQ=17)

                                                                                                 cTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACgag                                                 >  2:683463/1‑151 (MQ=17)

                                                                                                    aTTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGAcc                                              <  1:4499716/151‑1 (MQ=17)

                                                                                                      ttAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAg                                            <  2:1449780/151‑1 (MQ=17)

                                                                                                        aGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTg                                          >  2:4782102/1‑151 (MQ=17)

                                                                                                         gggATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGc                                         <  2:3268103/151‑1 (MQ=17)

                                                                                                           gATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCcg                                       <  1:1795799/151‑1 (MQ=14)

                                                                                                                aGGCACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCgaga                                  >  1:1574253/1‑151 (MQ=17)

                                                                                                                   cgccTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGAGGCTCCTTAAGAACGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACAGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATcc                               <  2:3043558/149‑1 (MQ=14)

                                                                                                                   cACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATcc                               <  2:1635804/151‑1 (MQ=14)

                                                                                                                   cACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATcc                               <  2:2112401/151‑1 (MQ=17)

                                                                                                                   cACCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATcc                               >  2:580146/1‑151 (MQ=17)

                                                                                                                    aCCTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCt                              >  1:4224932/1‑151 (MQ=14)

                                                                                                                     ccTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTg                             <  1:3767617/151‑1 (MQ=14)

                                                                                                                     ccTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTg                             <  1:2896825/151‑1 (MQ=14)

                                                                                                                     ccTGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTg                             >  1:1400007/1‑151 (MQ=14)

                                                                                                                     catGCGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTg                             <  2:3812159/149‑1 (MQ=14)

                                                                                                                         cGACATGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGcc                         <  1:165779/151‑1 (MQ=14)

                                                                                                                             aTGTGGGAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGt                     >  1:4852355/1‑151 (MQ=14)

                                                                                                                                  ggAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGtgcatg                <  2:2001804/151‑1 (MQ=14)

                                                                                                                                   gAAATGTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGtgcatgc               <  2:1794938/151‑1 (MQ=14)

                                                                                                                                       tGTCCTCTACGTTGTGCTTGCGGCCCCTTATGTCCGGGAGCGAGCGCATCCCATTATCTGGCTCCCTGATCCCCGTTACTGGTGGTGCGGTGGGCGCTGCATTGGCTGACGAGACCAGTCCCGCGACAGCCTGAGCCGGGTTCATgcagca           <  2:5030646/151‑1 (MQ=9)

                                                                                                                                        gTCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCAc          <  2:409349/151‑1 (MQ=14)

                                                                                                                                         tCCTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACt         >  1:4788239/1‑151 (MQ=14)

                                                                                                                                          ccTCTACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTg        >  1:1150083/1‑151 (MQ=14)

                                                                                                                                            tctACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCCTGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTCACGAGACCAGTGCCGCGAGATCCTGAGCCGGGGGCATGCAGCCCTGCg      >  1:1182821/1‑151 (MQ=14)

                                                                                                                                              tACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGAt    >  1:3300674/1‑151 (MQ=14)

                                                                                                                                              tACGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGAt    <  1:846625/151‑1 (MQ=255)

                                                                                                                                               aCGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATg   <  2:259665/151‑1 (MQ=14)

                                                                                                                                               aCGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATg   >  2:1304773/1‑151 (MQ=14)

                                                                                                                                               aCGCTGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGGGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCAGGGTGCATGCAGAACTGCGATg   >  2:4306861/1‑151 (MQ=14)

                                                                                                                                                cgctGGACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGa  >  2:1865620/1‑151 (MQ=14)

AGCGCCAATTATAAATCTACGCATTCATCGCTTTCAAATATCGCAACTTCAGCATTGAGCCAATGAGTTCCTCCCAAGATCTAGTCCTAGCACAGACCTTATTTAGGGATCAAGGCACCTGCGACATGTGGGAAATGTCCTCTACGCGGGACTGGCGGCTCCTTACGTCCGGGAGCAAGGGCATCTCATGATCTGGCCTCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGA  >  CP009974/1358227‑1358521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`