Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,358,523 C→A intergenic (+384/+2306) RPPX_05970 → / ← RPPX_05980 hypothetical protein/tRNA‑Thr

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,358,5230CA99.7% 1005.4 / NA 288intergenic (+384/+2306)RPPX_05970/RPPX_05980hypothetical protein/tRNA‑Thr
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base A (157/130);  minor base G (0/1);  total (157/131)
Fisher's exact test for biased strand distribution p-value = 4.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 288 total aligned reads displayed.

GGACTGGCGGCTCCTTACGTCCGGGAGCAAGGGCATCTCATGATCTGGCCTCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACCGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTGCA  >  CP009974/1358375‑1358670
                                                                                                                                                    |                                                                                                                                                   
ggACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAgg                                                                                                                                                   <  1:4075086/151‑1 (MQ=14)
   cTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGc                                                                                                                                                >  2:3826238/1‑151 (MQ=14)
    tGGCGGCTCCTTAAGGCCGAGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACAGCGATGACAGGGGCa                                                                                                                                               <  2:2411397/151‑1 (MQ=14)
    tGGCGGCTCCTTAAGACCGGGATCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATGCTGAGCCGTGTGCATGCAGCACTTCGATGACAGGGGCa                                                                                                                                               >  1:2033440/1‑151 (MQ=11)
    tGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCa                                                                                                                                               >  2:4041125/1‑151 (MQ=14)
    tGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCa                                                                                                                                               <  1:2967297/151‑1 (MQ=14)
    tGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCGCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCa                                                                                                                                               <  2:4964283/151‑1 (MQ=14)
     ggcggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCAt                                                                                                                                              <  1:3625410/151‑1 (MQ=14)
       cggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGc                                                                                                                                            >  2:1380975/1‑151 (MQ=14)
        ggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGcc                                                                                                                                           <  2:703617/151‑1 (MQ=255)
        ggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGcc                                                                                                                                           >  1:2388353/1‑151 (MQ=14)
         gcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCt                                                                                                                                          <  1:4565402/151‑1 (MQ=14)
          cTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTg                                                                                                                                         <  2:2947613/151‑1 (MQ=14)
           cccTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGGGCCGCGAGATCCGGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGa                                                                                                                                        <  2:307644/150‑1 (MQ=14)
             ctgaagaccGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACt                                                                                                                                      <  2:5343217/144‑1 (MQ=14)
               taagaccGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgt                                                                                                                                    >  1:450994/6‑151 (MQ=14)
               taagaccGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgt                                                                                                                                    >  2:3665509/6‑151 (MQ=255)
               taagaccGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgt                                                                                                                                    >  1:1876605/6‑151 (MQ=14)
                    ccGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgtcagtc                                                                                                                               <  1:2731839/151‑1 (MQ=255)
                     cGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgtcagtca                                                                                                                              >  1:4159183/1‑151 (MQ=255)
                     cGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgtcagtca                                                                                                                              >  1:2876760/1‑151 (MQ=255)
                     cGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgtcagtca                                                                                                                              >  1:1762163/1‑151 (MQ=255)
                        gAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGt                                                                                                                           >  1:4609302/1‑151 (MQ=255)
                         aGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTg                                                                                                                          >  1:2713540/1‑151 (MQ=255)
                           cAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCa                                                                                                                        >  1:4780112/1‑151 (MQ=255)
                            aaGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAg                                                                                                                       >  1:347314/1‑151 (MQ=255)
                              gggCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTc                                                                                                                     <  2:4802635/151‑1 (MQ=255)
                                gCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCa                                                                                                                   <  2:2360597/151‑1 (MQ=255)
                                gCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCa                                                                                                                   >  2:4391938/1‑151 (MQ=255)
                                 cATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCAt                                                                                                                  <  2:2091426/151‑1 (MQ=255)
                                  aTCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGTCGCGAGATCCTGAGCCGGGTGCATGCAGCTTTGCGATGACAGGGGCATGCCTGACTGGCAGTCAGGTGGAGTCCAtt                                                                                                                 >  2:560693/1‑151 (MQ=14)
                                   tctcATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTc                                                                                                                <  1:5128035/151‑1 (MQ=255)
                                    ctcATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTcc                                                                                                               >  2:2853024/1‑151 (MQ=255)
                                     tcATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCt                                                                                                              <  2:3530681/151‑1 (MQ=255)
                                     tcATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCt                                                                                                              >  2:271515/1‑151 (MQ=255)
                                     tcATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCt                                                                                                              >  1:3164545/1‑151 (MQ=255)
                                          aTCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTc                                                                                                         >  2:825004/1‑151 (MQ=255)
                                           tCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCt                                                                                                        <  2:1150083/151‑1 (MQ=255)
                                              ggctccctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCg                                                                                                     >  2:2328596/6‑151 (MQ=255)
                                                   cctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCAcc                                                                                                >  1:1417475/1‑151 (MQ=255)
                                                   cctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCAcc                                                                                                >  1:2513305/1‑151 (MQ=255)
                                                    ctGGGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACca                                                                                               <  2:4647525/151‑1 (MQ=255)
                                                      gAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACcatc                                                                                             >  1:4454418/1‑151 (MQ=255)
                                                       aGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACcatca                                                                                            <  1:2326671/151‑1 (MQ=255)
                                                         cACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCatcatc                                                                                          >  1:1662952/1‑151 (MQ=255)
                                                           ccGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGAGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTa                                                                                        <  2:4737321/151‑1 (MQ=255)
                                                            cagacacGGTCGGCGGCTGGAGGCTCTATTGTCTGACGCAGCCAGTCCCCCGAGATCCTGGGCCGCGTGCATTCACCACTGCCTTGACAGGGGCATTCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTAc                                                                                       <  2:4856414/145‑1 (MQ=2)
                                                              ttACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACaa                                                                                     >  1:3636286/1‑151 (MQ=255)
                                                               tACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAAc                                                                                    >  1:371122/1‑151 (MQ=255)
                                                                aCCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACg                                                                                   >  1:2291680/1‑151 (MQ=255)
                                                                aCCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACg                                                                                   <  2:3655181/151‑1 (MQ=255)
                                                                     tGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGtt                                                                              >  2:2593164/1‑151 (MQ=255)
                                                                     tGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGtt                                                                              <  1:5303591/151‑1 (MQ=255)
                                                                      gggCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTg                                                                             >  1:3415567/1‑151 (MQ=255)
                                                                        gCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCCTCATCTACAACGCTGTTGCt                                                                           >  2:421755/1‑151 (MQ=255)
                                                                         cGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTg                                                                          >  2:2254574/1‑151 (MQ=255)
                                                                          gggTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTgg                                                                         >  1:1588244/1‑151 (MQ=255)
                                                                             tGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGa                                                                      >  2:3290964/1‑151 (MQ=255)
                                                                              ggAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGAc                                                                     <  1:1356334/151‑1 (MQ=255)
                                                                              ggAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGAc                                                                     >  1:627964/1‑151 (MQ=255)
                                                                                aGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACAt                                                                   >  1:4982415/1‑151 (MQ=255)
                                                                                aGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACAt                                                                   <  2:5332458/151‑1 (MQ=255)
                                                                                 ggCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATc                                                                  <  2:5157826/151‑1 (MQ=255)
                                                                                 ggCCGCATTGGCTGACGAGACCAGGGCCGCGACATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATc                                                                  <  2:1922958/151‑1 (MQ=255)
                                                                                     gCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCCCCATCATCTACAACGCTGTTGCTGGTGACATCGGCg                                                              >  1:2817520/1‑151 (MQ=255)
                                                                                         tGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGCCGTTTg                                                          >  2:4233625/1‑151 (MQ=255)
                                                                                             tGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCAc                                                      >  1:2015490/1‑151 (MQ=255)
                                                                                              gACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACg                                                     >  1:4282609/1‑151 (MQ=255)
                                                                                                 gagaCCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCg                                                  >  1:4476496/1‑151 (MQ=255)
                                                                                                   gaCCAGTGCCGCGAGATCCTGAACCGGGTGCATGCAGCACTGCGATGACAGGGGCACGCCTGACTGTCAGTCAAGTGCAGTCCAGTCCGTGGGCGGCGGCACCACCATCTACGACGCTGCTGCTGGTGACATCGGCGTTCGTCACGcccac                                                >  2:369611/1‑148 (MQ=14)
                                                                                                    aCCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGAtt                                               >  1:739458/1‑151 (MQ=255)
                                                                                                         tGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCAc                                          <  1:2593164/151‑1 (MQ=255)
                                                                                                         tGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCAc                                          <  1:3929555/151‑1 (MQ=255)
                                                                                                         tGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCAc                                          >  1:5216400/1‑151 (MQ=255)
                                                                                                          gCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACg                                         <  1:1935229/151‑1 (MQ=255)
                                                                                                           ccGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGa                                        <  2:62231/151‑1 (MQ=255)
                                                                                                           ccGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGa                                        <  2:442697/151‑1 (MQ=255)
                                                                                                                agaTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGa                                   <  2:185100/151‑1 (MQ=255)
                                                                                                                agaTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGa                                   >  2:1539272/1‑151 (MQ=255)
                                                                                                                     cTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGc                              >  1:1180092/1‑151 (MQ=255)
                                                                                                                     cTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGc                              >  2:1027996/1‑151 (MQ=255)
                                                                                                                      tGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGcc                             >  1:1017304/1‑151 (MQ=255)
                                                                                                                             ggTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGc                      <  1:683463/151‑1 (MQ=255)
                                                                                                                               tgcatgcaGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCa                    <  1:4210568/151‑1 (MQ=255)
                                                                                                                                 catgcaGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCAtg                  >  1:4889423/1‑151 (MQ=255)
                                                                                                                                  atgcaGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCAtgt                 <  2:1442839/151‑1 (MQ=255)
                                                                                                                                   tgcaGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCAtgtg                >  1:3241419/1‑151 (MQ=255)
                                                                                                                                   tgcaGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCAtgtg                <  1:5352956/151‑1 (MQ=255)
                                                                                                                                     cagcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCg              <  2:1216915/151‑1 (MQ=255)
                                                                                                                                      agcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGa             >  2:2539846/1‑151 (MQ=255)
                                                                                                                                       gcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGAt            >  2:2032645/1‑151 (MQ=255)
                                                                                                                                        caCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGc               <  2:3209536/147‑1 (MQ=255)
                                                                                                                                        caCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATc           <  2:3891582/151‑1 (MQ=255)
                                                                                                                                        caCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATc           >  1:2596570/1‑151 (MQ=255)
                                                                                                                                              gATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCt     <  2:2001268/151‑1 (MQ=255)
                                                                                                                                               aTGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCTCGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTg    >  2:849942/1‑151 (MQ=255)
                                                                                                                                               aTGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTg    >  2:890805/1‑151 (MQ=255)
                                                                                                                                                tGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTgc   >  2:3222429/1‑151 (MQ=255)
                                                                                                                                                 gACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTgca  >  1:2134422/1‑151 (MQ=255)
                                                                                                                                                 gACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTgca  >  2:3962660/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GGACTGGCGGCTCCTTACGTCCGGGAGCAAGGGCATCTCATGATCTGGCCTCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACCGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTGCA  >  CP009974/1358375‑1358670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: