Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 144,644 G→A P90L (CCC→CTC)  RPPX_00635 ← chemotaxis protein CheY

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009974144,6440GA99.6% 942.3 / NA 251P90L (CCC→CTC) RPPX_00635chemotaxis protein CheY
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (125/124);  total (125/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 253 total aligned reads displayed.

CTGGAACGGTTTCAGCGCCAACTGCTGGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTT  >  CP009974/144496‑144791
                                                                                                                                                    |                                                                                                                                                   
cTGGAACGGTTTCAGCGCCAACTGCTGGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTgagg                                                                                                                                                   <  2:1916855/151‑1 (MQ=255)
   gAACGGTTTCAGCGCCAACTGCTGGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGGATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGACAGCGCCGGCCTGCAACAAGCGTGTGAGGAAc                                                                                                                                                >  1:1839713/1‑151 (MQ=255)
   gAACGGTTTCAGCGCCAACTGCTGGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAAc                                                                                                                                                >  1:5142872/1‑151 (MQ=255)
    aaCGGTCTCCGCGTCAACTGCTGGGCGATCTGCTGGCTGATATAGCGCAAGCCGGCAAAGGCAAGTCGAATTGCCTGGACCATTTCGGCAAGGCATGCACCCTTGGCCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGGGTGCGGAGCg                                                                                                                                               <  2:3720062/151‑1 (MQ=255)
          ttCCGCGCCAGCTGCTGGGCGATCTGCGGGCTGATATACCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCtt                                                                                                                                         <  1:252976/151‑1 (MQ=255)
          ttCAGCGCCAACTGCTGGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTTAGGAACGGGTCtt                                                                                                                                         >  2:1852501/1‑151 (MQ=255)
          ttCAGCGCCAACTGCTGGGCGATCTGCGGGCTGATATAGCGCGGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCtt                                                                                                                                         <  2:710985/151‑1 (MQ=255)
           tCAGCGCCAACTGCTGGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTc                                                                                                                                        >  2:530920/1‑151 (MQ=255)
                   aaCTGCTGGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGcacc                                                                                                                                >  2:1281615/1‑150 (MQ=255)
                      tgctgGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCg                                                                                                                             <  1:3303938/151‑1 (MQ=255)
                      tgctgGGCGATCTGCGGGCTGATATAACGCTTGCCGGCAAACGCCAGTCGAGTGGCCTGGAACATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCAGCAGCGCCGGCCTGCAACAAGCCAGTGAGCAACAAGTCTTCATCGCACTCCg                                                                                                                             >  2:5107819/1‑151 (MQ=255)
                       gctgGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCCACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGt                                                                                                                            >  1:4357615/1‑151 (MQ=255)
                         tgGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCa                                                                                                                          <  1:1099860/151‑1 (MQ=255)
                          gggCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCAc                                                                                                                         <  1:140381/151‑1 (MQ=255)
                           ggCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCAcc                                                                                                                        >  1:2907149/1‑151 (MQ=255)
                            gCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCg                                                                                                                       <  1:1180295/151‑1 (MQ=255)
                             cGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGc                                                                                                                      >  1:4777716/1‑151 (MQ=255)
                                   gCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTAc                                                                                                                >  1:2866159/1‑151 (MQ=255)
                                    cGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTAcc                                                                                                               >  2:119519/1‑151 (MQ=255)
                                    cGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTAcc                                                                                                               <  1:4815394/151‑1 (MQ=255)
                                     gggCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCt                                                                                                              <  2:4722542/151‑1 (MQ=255)
                                      gggtGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCtt                                                                                                             <  2:4587855/148‑1 (MQ=255)
                                      ggCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCtt                                                                                                             <  2:3263543/151‑1 (MQ=255)
                                        ttGAGATAGCCCTGGCCGGCAAAGGCCAGTCGGATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGa                                                                                                           <  2:4617957/150‑1 (MQ=255)
                                         tGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGAt                                                                                                          <  1:642470/151‑1 (MQ=255)
                                         tGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGAt                                                                                                          <  2:627067/151‑1 (MQ=255)
                                         gggtataGCGCGGGCCGGCAGAGGCCAGTCGAATGGCCTGGACGATTTCGTCAAGGCGTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGAt                                                                                                          <  2:4795732/148‑1 (MQ=255)
                                          gATATAGCGCTGACCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATg                                                                                                         <  2:1319209/151‑1 (MQ=255)
                                          catatACCGCTGGCCAGCAAACGCCAGTCGATTGGCCTGGACCATTTCGTCAAAGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATg                                                                                                         <  1:4578119/150‑1 (MQ=255)
                                           atatAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGt                                                                                                        >  1:1523789/1‑151 (MQ=255)
                                            tataGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAAGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGCGAGGAACGGGTCTTCCTCGCACACCGTCACCCACACTACCTTGATGTc                                                                                                       >  2:2540170/1‑151 (MQ=255)
                                              taGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAg                                                                                                     >  1:1631746/1‑151 (MQ=255)
                                              taGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCACTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCCGCAACAAGCGTGTGAGGAACGGCTCTTCCTCGCACACCGTCACCGCCACTACCTTGCTATCAg                                                                                                     >  2:3589211/1‑151 (MQ=255)
                                                  gcTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATg                                                                                                 <  1:824970/151‑1 (MQ=255)
                                                    tGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGc                                                                                               >  1:5339490/1‑151 (MQ=255)
                                                     ggCCGGCAAAGGCCAGTCGGATGGGCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCt                                                                                              <  2:4907796/151‑1 (MQ=255)
                                                       ccGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTgc                                                                                            <  1:4106230/151‑1 (MQ=255)
                                                          gCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCgca                                                                                         >  2:4051337/1‑151 (MQ=255)
                                                          gCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCgca                                                                                         <  1:2788378/151‑1 (MQ=255)
                                                                gCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCt                                                                                   <  2:2423580/151‑1 (MQ=255)
                                                                 ccAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCtt                                                                                  <  1:3574623/151‑1 (MQ=255)
                                                                  cAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTg                                                                                 <  1:3809558/151‑1 (MQ=255)
                                                                   aGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGc                                                                                <  1:4318172/151‑1 (MQ=255)
                                                                     tCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCgg                                                                              >  2:804642/1‑151 (MQ=255)
                                                                       gAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGt                                                                            <  2:548221/151‑1 (MQ=255)
                                                                         aTGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGTCTGCGCAGCAGCTTGCGGGTgg                                                                          >  1:3042614/1‑151 (MQ=255)
                                                                         aTGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTgg                                                                          >  1:2624258/1‑151 (MQ=255)
                                                                          tGGCCTGGACCATTGCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGc                                                                         <  2:4457732/151‑1 (MQ=255)
                                                                           ggCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGcc                                                                        <  2:1393031/151‑1 (MQ=255)
                                                                              cTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTCAGGAACGGCTCTTCCTCGCACACCGTCACCGCCACTCCCTTGATGTCGGGGTGGCTCCCCCCCAGCTTGCGGGTGGcccac                                                                     >  2:4083433/1‑148 (MQ=255)
                                                                               tGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGCGGCCTCCa                                                                    >  1:5420383/1‑151 (MQ=255)
                                                                                ggACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCaa                                                                   <  2:3198068/151‑1 (MQ=255)
                                                                                ggACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCaa                                                                   <  1:3932104/151‑1 (MQ=255)
                                                                                 gACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAg                                                                  >  2:2705137/1‑151 (MQ=255)
                                                                                  aCCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAgc                                                                 <  2:1568869/151‑1 (MQ=255)
                                                                                  aCCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAgc                                                                 >  1:2275892/1‑151 (MQ=255)
                                                                                   cgaTTTCGTCAAGGCCTCCACCCTTGGTGAGGTAGCAGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAgcc                                                                <  2:5033928/149‑1 (MQ=255)
                                                                                    cATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAgccg                                                               >  2:2826278/1‑151 (MQ=255)
                                                                                     agttCGGCAAGGCCTGCACCCTTGGTCAGGTGGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAgccgc                                                              <  2:2276789/149‑1 (MQ=255)
                                                                                     aTTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAgccgc                                                              >  1:2731721/1‑151 (MQ=255)
                                                                                       ttCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCt                                                            <  2:484391/151‑1 (MQ=255)
                                                                                        tCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTa                                                           <  1:1968499/151‑1 (MQ=255)
                                                                                        tCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGGCACCGCCACTACCTTGATGTGCGGATGGCTGCGCAGCAGCTTGCGGGTGCCCTGCAAGCCGCCTa                                                           >  1:3320341/1‑151 (MQ=255)
                                                                                         cGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTAt                                                          >  2:3464977/1‑151 (MQ=255)
                                                                                            cAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGcc                                                       >  2:3031718/1‑151 (MQ=255)
                                                                                             aaGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCg                                                      <  2:1481282/151‑1 (MQ=255)
                                                                                             aaGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCg                                                      <  1:4190905/151‑1 (MQ=255)
                                                                                              aGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCgg                                                     <  1:896123/151‑1 (MQ=255)
                                                                                                gCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGc                                                   <  2:2658993/151‑1 (MQ=255)
                                                                                                gCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGc                                                   <  1:3523859/151‑1 (MQ=255)
                                                                                                gCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGc                                                   <  1:5181961/151‑1 (MQ=255)
                                                                                                 ccTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCa                                                  <  1:4388043/151‑1 (MQ=255)
                                                                                                 ccTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCa                                                  >  1:1249619/1‑151 (MQ=255)
                                                                                                 ccTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCa                                                  >  1:2974689/1‑151 (MQ=255)
                                                                                                  cTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCAt                                                 >  1:3645465/1‑151 (MQ=255)
                                                                                                   tGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCAtt                                                >  2:1588386/1‑151 (MQ=255)
                                                                                                    gCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCAttt                                               >  2:2056016/1‑151 (MQ=255)
                                                                                                        ccTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTcac                                           <  2:91232/151‑1 (MQ=255)
                                                                                                          ttGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCAcat                                         >  1:1025157/1‑151 (MQ=255)
                                                                                                            ggTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCAcatcc                                       <  2:3546647/151‑1 (MQ=255)
                                                                                                                    aGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGcac                               >  1:975946/1‑151 (MQ=255)
                                                                                                                        ggCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACg                           <  1:2051142/151‑1 (MQ=255)
                                                                                                                        ggCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACg                           <  1:4929335/151‑1 (MQ=255)
                                                                                                                         gCAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGCGGCATCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACgc                          >  1:1821475/1‑150 (MQ=255)
                                                                                                                          cAGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTc                         >  1:454076/1‑151 (MQ=255)
                                                                                                                           aGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCgcagca                                                                                      >  2:2431850/1‑89 (MQ=255)
                                                                                                                           aGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTcc                        <  1:1698357/151‑1 (MQ=255)
                                                                                                                           aGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTcc                        >  2:2153001/1‑151 (MQ=255)
                                                                                                                           aGCGCCGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGAGGCCTCCAAGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTcc                        >  2:4783273/1‑151 (MQ=255)
                                                                                                                               ccGGCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGtt                    >  1:2198648/1‑151 (MQ=255)
                                                                                                                                 ggCCTGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTc                  >  2:3897547/1‑151 (MQ=255)
                                                                                                                                     tGCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCt              >  1:3990437/1‑151 (MQ=255)
                                                                                                                                      gCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTc             <  2:4208910/151‑1 (MQ=255)
                                                                                                                                      gCAACAAGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTCTCACATCCATCAGCACAACGTCCGGTTTCAGCTc             >  1:4632467/1‑151 (MQ=255)
                                                                                                                                       caacaaGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTcc            >  1:4436209/1‑151 (MQ=255)
                                                                                                                                       caacaaGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTcc            <  1:1076192/151‑1 (MQ=255)
                                                                                                                                           aaGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACTTCCGGTTTCAGCTCCCgtg        >  2:2676457/1‑149 (MQ=255)
                                                                                                                                            aGCGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGc       >  2:424053/1‑151 (MQ=255)
                                                                                                                                              cGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAg                                  <  2:2768184/122‑1 (MQ=255)
                                                                                                                                              cGTGTGAGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCa     >  1:427627/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CTGGAACGGTTTCAGCGCCAACTGCTGGGCGATCTGCGGGCTGATATAGCGCTGGCCGGCAAAGGCCAGTCGAATGGCCTGGACCATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGATGGCTGCGCAGCAGCTTGCGGGTGGCCTCCAAGCCGCCTATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTT  >  CP009974/144496‑144791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑