BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	1,554,990	A→G	D139D (GAT→GAC)	tuf ←	elongation factor Tu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	1,554,990	0	A	G	100.0%	681.3 / NA	238	D139D (GAT→GAC)	tuf	elongation factor Tu
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (125/113); total (125/113)

Only 100 of 238 total aligned reads displayed.

CATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGATCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTC  >  CP009974/1554876‑1555137

 aTACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGc                                                                                                                >  2:3646949/1‑151 (MQ=14)

 aTACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGc                                                                                                                <  2:3711326/151‑1 (MQ=14)

    cGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTa                                                                                                             <  2:2412360/151‑1 (MQ=14)

    cGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTa                                                                                                             >  1:1631228/1‑151 (MQ=17)

     gAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTAc                                                                                                            >  2:2523346/1‑151 (MQ=17)

      aGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTAcc                                                                                                           <  2:800549/151‑1 (MQ=17)

       gCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCt                                                                                                          <  2:3209167/151‑1 (MQ=17)

         ggAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGGAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGa                                                                                                        >  2:173318/1‑151 (MQ=14)

           aaCCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACg                                                                                                      >  2:1628995/1‑151 (MQ=17)

           aaCCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACg                                                                                                      >  1:2462518/1‑151 (MQ=17)

              cGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGa                                                                                                   >  1:400338/1‑151 (MQ=17)

              cGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGa                                                                                                   <  1:980205/151‑1 (MQ=17)

               gatgatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAc                                                                                                  >  2:1690966/1‑151 (MQ=14)

               gatgatgatCGGAGTGTCGCCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAc                                                                                                  <  2:4101209/151‑1 (MQ=17)

                atgatgatCGGAGTGTCGTCGCCTGGGAAGTCGAAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAca                                                                                                 <  1:1115152/151‑1 (MQ=17)

                 tgatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcag                                                                                                <  2:2595459/151‑1 (MQ=17)

                 tgatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcag                                                                                                >  1:5024475/1‑151 (MQ=14)

                   atgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagca                                                                                              <  2:708237/151‑1 (MQ=17)

                     gatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAgg                                                                                            <  1:3143709/151‑1 (MQ=17)

                      atCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGa                                                                                           >  2:5206657/1‑151 (MQ=14)

                       tCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAt                                                                                          >  2:1444503/1‑151 (MQ=17)

                        cGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtg                                                                                         <  1:4211786/151‑1 (MQ=17)

                        cGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtg                                                                                         <  1:1066904/151‑1 (MQ=17)

                        cGGAGAGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCGACCAGGACAGCCTGGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtg                                                                                         >  2:1818590/1‑151 (MQ=255)

                             tgtCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTc                                                                                    >  2:486559/1‑151 (MQ=17)

                             tgtCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTc                                                                                    <  1:363010/151‑1 (MQ=17)

                                  tcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACggg                                                                               <  1:4139274/151‑1 (MQ=17)

                                  tcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACggg                                                                               >  1:1742513/1‑151 (MQ=17)

                                    gCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGtt                                                                             >  1:2492300/1‑151 (MQ=17)

                                     ccTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGttt                                                                            >  2:2572716/1‑151 (MQ=17)

                                      cTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtg                                                                           >  1:1474224/1‑151 (MQ=17)

                                       tGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgt                                                                          <  1:3182430/151‑1 (MQ=18)

                                       tGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgt                                                                          <  1:67120/151‑1 (MQ=18)

                                           aaGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTTACGGGTTTGTGGCa                                                                      >  1:3914880/1‑151 (MQ=255)

                                           aaGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGcc                                                                      >  2:3432359/1‑150 (MQ=21)

                                             gTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATc                                                                    <  2:2954883/151‑1 (MQ=25)

                                             gTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATc                                                                    <  1:4481425/151‑1 (MQ=21)

                                             gTCGAAGGTGGACAGCAGGGCGCGAACTGCCGTCCCGACCGGTTCCAGCAGATCAGCGTCGACTACCAGGTCAGCGATGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGAGACAGCAGGATGTGCTCACGGGTTTGTGGCATc                                                                    <  2:1549400/151‑1 (MQ=11)

                                                 tAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAGCGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGAc                                                                <  1:4410943/151‑1 (MQ=18)

                                                 tAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGAc                                                                >  1:143304/1‑151 (MQ=21)

                                                  aGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGAcc                                                               >  2:4315322/1‑151 (MQ=25)

                                                  aGGTGGACAGCAGGTCGCGAACTTCCATCTAGACCAGTTCCAGAAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGAcc                                                               <  1:1754081/151‑1 (MQ=255)

                                                   ggTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCa                                                              >  2:4525959/1‑151 (MQ=18)

                                                    gTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCAt                                                             <  1:2832632/151‑1 (MQ=25)

                                                      ggACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcg                                                           <  2:3301914/151‑1 (MQ=25)

                                                        aCAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCGCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggc                                                         <  2:2759012/151‑1 (MQ=18)

                                                          agcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcgg                                                       <  2:4028572/151‑1 (MQ=25)

                                                          agcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcgg                                                       <  2:5359402/151‑1 (MQ=25)

                                                           gcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTCCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACCGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCcgcggc                                                      >  2:2060648/1‑151 (MQ=255)

                                                              ggTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCTGa                                                   >  2:5029463/1‑151 (MQ=18)

                                                              ggTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGa                                                   >  1:1576263/1‑151 (MQ=25)

                                                                 cgcgAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCa                                                >  2:3126682/1‑151 (MQ=21)

                                                                  gcgAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCaa                                               <  2:5302736/151‑1 (MQ=25)

                                                                  gcgAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCaa                                               <  1:85613/151‑1 (MQ=25)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAc                                             >  1:4815662/1‑151 (MQ=25)

                                                                     aaCTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAcc                                            <  1:5299117/151‑1 (MQ=25)

                                                                     aaCTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAcc                                            >  2:2056069/1‑151 (MQ=25)

                                                                       cTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAg                                          <  2:4652918/151‑1 (MQ=25)

                                                                        ttCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAgg                                         >  1:4731058/1‑151 (MQ=25)

                                                                        ttCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAgg                                         >  2:56097/1‑151 (MQ=21)

                                                                        ttCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATAGGCGGCCGAGCAAACCAgg                                         >  2:3148107/1‑151 (MQ=18)

                                                                         tCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAggc                                        >  1:3097885/1‑150 (MQ=21)

                                                                          ccATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGAt                                       <  1:1364198/151‑1 (MQ=25)

                                                                           cATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATc                                      <  1:2879050/151‑1 (MQ=25)

                                                                           cATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATc                                      >  1:493681/1‑151 (MQ=25)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     <  2:1176780/151‑1 (MQ=37)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     >  1:5201461/1‑151 (MQ=37)

                                                                             tctcGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcgc                                    >  2:2380539/1‑151 (MQ=38)

                                                                              ctcGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcgcg                                   >  2:4635756/1‑151 (MQ=255)

                                                                              ctcGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcgcg                                   <  2:2865692/151‑1 (MQ=255)

                                                                                cGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGcc                                 >  2:2016883/1‑151 (MQ=255)

                                                                                 gACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCg                                >  1:2733174/1‑151 (MQ=255)

                                                                                  aCCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGt                               >  1:782050/1‑151 (MQ=255)

                                                                                    cAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTcc                             >  1:2178382/1‑151 (MQ=255)

                                                                                     aGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTTACGGGACAGCAGGAGGTGCTCACGGTTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCTCGCCGTccc                            >  2:578378/1‑150 (MQ=14)

                                                                                       ttCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATc                          >  1:2633601/1‑151 (MQ=255)

                                                                                       ttCCAGCAGCTCAGCGTCGGCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATc                          <  2:4936950/151‑1 (MQ=255)

                                                                                        tCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCt                         >  2:3586221/1‑151 (MQ=255)

                                                                                        tCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCt                         >  1:5247185/1‑151 (MQ=255)

                                                                                         ccAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTg                        <  1:1844687/151‑1 (MQ=255)

                                                                                          cagcagCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTgg                       <  1:1710789/151‑1 (MQ=255)

                                                                                           agcagcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGATGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTggg                      >  2:1143489/1‑151 (MQ=255)

                                                                                            gcagcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgc                     <  1:1304544/151‑1 (MQ=255)

                                                                                             cagcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgca                    <  1:3482545/151‑1 (MQ=255)

                                                                                                cTCAGCGTCGTCTACCAGGTCAGCTTTGTTCAGGATGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcagca                 <  2:4729620/151‑1 (MQ=255)

                                                                                                 tCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAc                <  1:4245836/151‑1 (MQ=255)

                                                                                                  cAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAcc               >  1:1993373/1‑151 (MQ=255)

                                                                                                  cAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAcc               <  1:3843228/151‑1 (MQ=255)

                                                                                                   aGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCg              >  1:4558286/1‑151 (MQ=255)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGTCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCACCTGGGAAGCACCGGTg           >  1:104926/1‑151 (MQ=255)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTg           <  1:1270399/151‑1 (MQ=255)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTg           <  2:2925605/151‑1 (MQ=255)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTg           >  1:584512/1‑151 (MQ=255)

                                                                                                       tcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGa          >  1:4509507/1‑151 (MQ=255)

                                                                                                       tcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGa          <  1:2478206/151‑1 (MQ=255)

                                                                                                         gtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCCGGATCGCGCCGTCCATCTCGGCAGCACCGGTGATc        >  2:4793193/1‑151 (MQ=255)

                                                                                                          tcgaCCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCa       <  1:3854692/148‑1 (MQ=255)

                                                                                                             aCCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGt    <  1:3761873/151‑1 (MQ=255)

                                                                                                              ccAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGtt   >  2:2796966/1‑151 (MQ=255)

                                                                                                               cAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGttc  >  1:2317159/1‑151 (MQ=255)

CATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGATCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTC  >  CP009974/1554876‑1555137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`