Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,561,742 G→C D410E (GAC→GAG)  RPPX_06985 ← DNA‑directed RNA polymerase subunit beta'

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,561,7420GC100.0% 1127.4 / NA 312D410E (GAC→GAG) RPPX_06985DNA‑directed RNA polymerase subunit beta'
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (159/153);  total (159/153)

Only 100 of 312 total aligned reads displayed.

GGCGTTGTACGCAGCACAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACGTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGCACTGGTGCAGACG  >  CP009974/1561595‑1561888
                                                                                                                                                   |                                                                                                                                                  
  cGTTGTACGCAGCACAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTcccc                                                                                                                                               >  2:789257/1‑150 (MQ=255)
   gTTGTACGCAGCACAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCcac                                                                                                                                              >  2:1177987/1‑151 (MQ=255)
    ctGTACGCAGCACAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGCGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCCAGAACCTCCcacc                                                                                                                                             >  2:3238453/2‑150 (MQ=255)
       tACGCAGCACAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACct                                                                                                                                          <  1:801143/151‑1 (MQ=255)
         cGCAGCACAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACctct                                                                                                                                        >  1:4124648/1‑151 (MQ=255)
          gcagcaCAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTg                                                                                                                                       <  1:2175186/151‑1 (MQ=255)
           cagcaCAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTgg                                                                                                                                      >  1:137986/1‑151 (MQ=255)
             gcaCAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCa                                                                                                                                    <  1:50516/151‑1 (MQ=255)
              cacaGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAg                                                                                                                                   >  1:4807420/1‑151 (MQ=255)
               acaGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCGAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGc                                                                                                                                  >  1:2048587/1‑151 (MQ=255)
                 aGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTc                                                                                                                                <  2:1600908/151‑1 (MQ=255)
                 aGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCAGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGcgc                                                                                                                                >  2:5248934/1‑149 (MQ=255)
                   aCCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTcgc                                                                                                                              <  1:4521632/151‑1 (MQ=255)
                   aCCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTcgc                                                                                                                              <  1:3601083/151‑1 (MQ=255)
                         gggTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGa                                                                                                                        <  2:1859244/151‑1 (MQ=255)
                         gggTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGa                                                                                                                        <  1:2742917/151‑1 (MQ=255)
                            tGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCa                                                                                                                     >  2:4931236/1‑151 (MQ=255)
                            agCAGCTGAATAGCCTTACCTACGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCa                                                                                                                     <  2:2659985/150‑1 (MQ=255)
                                gCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCAtctt                                                                                                                 <  2:1313837/151‑1 (MQ=255)
                                 cTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCAtcttc                                                                                                                <  2:2176381/151‑1 (MQ=255)
                                 cTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCAtcttc                                                                                                                >  1:1278207/1‑151 (MQ=255)
                                    aaTAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTg                                                                                                             <  1:1848651/151‑1 (MQ=255)
                                     aTAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTgg                                                                                                            >  1:4704619/1‑151 (MQ=255)
                                     aTAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTgg                                                                                                            <  2:1369406/151‑1 (MQ=255)
                                       aGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCACCTTCTTGGcc                                                                                                          >  2:4750259/1‑150 (MQ=255)
                                           ttACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCt                                                                                                      >  1:946037/1‑151 (MQ=255)
                                           ttACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCt                                                                                                      <  2:3528031/151‑1 (MQ=255)
                                           ttACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTCGCAGCTCGCGCTCGACCATCCTCTTGGCAcccc                                                                                                      >  2:2760128/1‑150 (MQ=255)
                                            tACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCtt                                                                                                     <  1:5425840/151‑1 (MQ=255)
                                             aCCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTg                                                                                                    <  1:2892570/151‑1 (MQ=255)
                                             aCCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTg                                                                                                    <  1:5404967/151‑1 (MQ=255)
                                                ttCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGAtg                                                                                                 >  1:4306309/1‑151 (MQ=255)
                                                 tCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGAtgg                                                                                                >  1:591507/1‑151 (MQ=255)
                                                 tCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGAtgg                                                                                                >  2:4707188/1‑151 (MQ=255)
                                                   gATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGAtggtg                                                                                              <  1:3535338/151‑1 (MQ=255)
                                                   gATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGAtggtg                                                                                              <  2:1804262/151‑1 (MQ=255)
                                                    aTCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGAtggtgg                                                                                             >  1:37399/1‑151 (MQ=255)
                                                     tCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATggtggt                                                                                            >  2:1235343/1‑151 (MQ=255)
                                                     tCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATggtggt                                                                                            <  1:10019/151‑1 (MQ=255)
                                                       aGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCg                                                                                          <  1:1093921/151‑1 (MQ=255)
                                                            gggTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGa                                                                                     <  2:3859568/151‑1 (MQ=255)
                                                             ggTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGAc                                                                                    <  2:2236254/151‑1 (MQ=255)
                                                                tCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTcgc                                                                                                                              >  1:3039172/1‑106 (MQ=255)
                                                                tCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCAc                                                                                 >  2:512477/1‑151 (MQ=255)
                                                                tCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCAc                                                                                 <  1:1661176/151‑1 (MQ=255)
                                                                 cAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACg                                                                                <  1:5251522/151‑1 (MQ=255)
                                                                  aaaCGCCTGGATACCCAGACGGTGAAGGGGCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCGTGCTGGTGGTCGCGAGACCACGc                                                                               >  2:1593567/1‑151 (MQ=255)
                                                                   aaCGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCa                                                                              >  2:4545403/1‑151 (MQ=255)
                                                                   aaCGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCa                                                                              <  1:919545/151‑1 (MQ=255)
                                                                   aaCGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCa                                                                              <  2:2582946/151‑1 (MQ=255)
                                                                     cGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCAtt                                                                            >  1:4966640/1‑151 (MQ=255)
                                                                     cGCCTAGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCAtt                                                                            <  1:2201838/151‑1 (MQ=255)
                                                                      gCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCAttt                                                                           <  1:117243/151‑1 (MQ=255)
                                                                       ccTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTc                                                                          >  1:395013/1‑151 (MQ=255)
                                                                        cTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCCTTTcc                                                                         >  2:4115621/1‑151 (MQ=255)
                                                                         tGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCa                                                                        <  2:4606788/151‑1 (MQ=255)
                                                                          ggATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAg                                                                       >  1:4239521/1‑151 (MQ=255)
                                                                           gATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCCTTTCCAGc                                                                      >  2:4395507/1‑151 (MQ=255)
                                                                           gATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGc                                                                      <  2:2853094/151‑1 (MQ=255)
                                                                             tACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCtt                                                                    >  1:2123744/1‑151 (MQ=255)
                                                                             caCCCAGACGGTGAAGGGTCCGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCtt                                                                    <  1:2275631/150‑1 (MQ=255)
                                                                              aCCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTg                                                                   <  1:739945/151‑1 (MQ=255)
                                                                                ccAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGcc                                                                 >  1:3312847/1‑151 (MQ=255)
                                                                                     cGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGaaaa                                                            >  1:1898290/1‑151 (MQ=255)
                                                                                        tGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGa                                                         <  1:3666568/151‑1 (MQ=255)
                                                                                         gAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGAGGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGaa                                                        <  2:2376318/151‑1 (MQ=255)
                                                                                          aaGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAAc                                                       <  2:1134460/151‑1 (MQ=255)
                                                                                           aGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACg                                                      <  1:5192894/151‑1 (MQ=255)
                                                                                                cGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTg                                                 >  1:4169955/1‑151 (MQ=255)
                                                                                                 ggTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGACAATGAACGGCTTGa                                                >  2:2518791/1‑151 (MQ=255)
                                                                                                 ggTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGa                                                <  2:1467501/151‑1 (MQ=255)
                                                                                                  gTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGaa                                               >  1:2576402/1‑151 (MQ=255)
                                                                                                  gTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGaa                                               <  1:606379/151‑1 (MQ=255)
                                                                                                  gTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGaa                                               <  1:831958/151‑1 (MQ=255)
                                                                                                   tGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAAc                                              >  2:4186536/1‑151 (MQ=255)
                                                                                                    gCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACa                                             >  1:1593888/1‑151 (MQ=255)
                                                                                                    gCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACa                                             <  2:3085176/151‑1 (MQ=255)
                                                                                                         gTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCg                                        <  2:5337997/151‑1 (MQ=255)
                                                                                                           tGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAg                                      >  1:2808023/1‑151 (MQ=255)
                                                                                                            gagaAGTACGGGGTGTTCGCAAATCCCTTCAGCGAGAACCGCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAgg                                     <  1:2394968/151‑1 (MQ=255)
                                                                                                            gAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAgg                                     <  1:3185699/151‑1 (MQ=255)
                                                                                                                aGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCa                                 >  1:3374918/1‑151 (MQ=255)
                                                                                                                aGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCa                                 >  1:3855156/1‑151 (MQ=255)
                                                                                                                    cGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCAtctt                             <  1:2004686/151‑1 (MQ=255)
                                                                                                                    cGGGGTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCAtctt                             <  2:4273662/151‑1 (MQ=255)
                                                                                                                       ggTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATcttctt                          <  1:1447839/151‑1 (MQ=255)
                                                                                                                       ggTGTTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATcttctt                          <  2:3466961/151‑1 (MQ=255)
                                                                                                                        gtgtTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCttcttc                         <  2:592833/151‑1 (MQ=255)
                                                                                                                         tgtTCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCg                        >  1:3013948/1‑151 (MQ=255)
                                                                                                                           ttCGCGAATCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGc                      <  2:624337/151‑1 (MQ=255)
                                                                                                                                  aTCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGc               >  1:3874299/1‑151 (MQ=255)
                                                                                                                                   tCACTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGCa              >  1:2489675/1‑151 (MQ=255)
                                                                                                                                     aCTTCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGCCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTTGAGGGCCATCTTCTTCGGCAGACCGCACt            <  2:2048587/151‑1 (MQ=255)
                                                                                                                                        tCAGCGAGAACCTCCCACACCTCTGGCAGCTCGCGCCCGACCATCTTCTTGGCAGCCTTCATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCCAAAATGAACGGCTTGAACAGCTCGAGGGCCACCTTCTTCGTCACCCCGCACTgct         >  2:523549/1‑149 (MQ=255)
                                                                                                                                           gCGAGACCCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGCACTGGTGCa      <  2:3348342/151‑1 (MQ=255)
                                                                                                                                             gagaACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCGGACCGCACTGGTGCAGa    >  2:1878846/1‑151 (MQ=255)
                                                                                                                                             gagaACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGCACTGGTGCAGa    >  1:4660352/1‑151 (MQ=255)
                                                                                                                                             gagaACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGCACTGGTGCAGa    >  2:3188679/1‑151 (MQ=255)
                                                                                                                                             gagaACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGCACTGGTGCAGa    >  2:3033416/1‑151 (MQ=255)
                                                                                                                                               gaACCTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGCACTGGTGCAGACg  >  2:1423070/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GGCGTTGTACGCAGCACAGACCAGCGGGTGCAGCTGAATAGCCTTACCTTCGATCAGTACGGGTTCAAACGCCTGGATACCCAGACGGTGAAGGGTCGGTGCACGGTTGAGCAGTACGGGGTGTTCGCGAATCACTTCAGCGAGAACGTCCCACACCTCTGGCAGCTCGCGCTCGACCATCTTCTTGGCAGCCTTGATGGTGGTCGCCAGACCACGCATTTCCAGCTTGCCGAAAATGAACGGCTTGAACAGCTCGAGGGCCATCTTCTTCGGCAGACCGCACTGGTGCAGACG  >  CP009974/1561595‑1561888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑