| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 382,164 | T→C | intergenic (+300/+229) | RPPX_01535 → / ← RPPX_01540 | guanine permease/5‑hydroxyisourate hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 382,164 | 0 | T | C | 97.6% | 575.5 / 3.8 | 210 | intergenic (+300/+229) | RPPX_01535/RPPX_01540 | guanine permease/5‑hydroxyisourate hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (4/1); new base C (106/97); total (112/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.87e-01 | |||||||||||
Only 100 of 212 total aligned reads displayed.
GCGCCAAGGCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGG > CP009974/382016‑382309 | gcgcCAAGGCATTCCCGCGAAAATCCCACTGCGTCAACTGGCACGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTCCGCGGTCCCCCCGTAGCAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAAtctc < 1:2046522/151‑1 (MQ=37)gcgcCAAGGCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAAtctc < 2:21930/151‑1 (MQ=255) gcCAAGGCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCa < 2:2733232/151‑1 (MQ=255) ccAAGGCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCCGGCCAATCTCCAc > 2:354158/1‑151 (MQ=255) aaGGCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCAccc > 2:5369967/1‑151 (MQ=255) aaGGCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCAccc < 1:3994335/151‑1 (MQ=255) aaGGCATTCACGCGCAAATCCCACTGCGTCAAATGGCCAGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCAccc < 2:1647868/151‑1 (MQ=255) gCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACccgcc < 2:2796200/151‑1 (MQ=255) gCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACccgcc < 2:2405262/151‑1 (MQ=255) cATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACccgccg < 2:2115750/151‑1 (MQ=255) cATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACccgccg > 1:4426539/1‑151 (MQ=255) aTTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGt > 1:4784382/1‑151 (MQ=255) tCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTc > 1:419364/1‑151 (MQ=255) aCGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCAc > 2:3796020/1‑151 (MQ=255) gcAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTCCACCGtt > 1:4564733/1‑151 (MQ=255) cAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGttc > 1:2584045/1‑150 (MQ=255) aaaTCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgc < 1:4533392/151‑1 (MQ=255) aaaTCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgc < 1:2624224/151‑1 (MQ=255) aaTCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgct < 2:4784382/151‑2 (MQ=255) aTCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgctg > 2:2665544/1‑149 (MQ=255) aTCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgctc > 1:1834151/1‑149 (MQ=255) cccGCTGCGTCGAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCGCCCGCCGTTCACCGTTgctgcc < 2:3741649/151‑1 (MQ=21) tGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCAc < 1:3073970/151‑1 (MQ=255) tGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCGTGCTTAACATTGGAAAGGCCGGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCGCCACCCGCCTTCCACCTTTGCTGCCGCCAc > 2:1626649/1‑151 (MQ=21) gCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCAcc > 2:2874243/1‑151 (MQ=255) cAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTAt > 2:2921829/1‑151 (MQ=255) cAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTAt > 1:3639727/1‑151 (MQ=255) tGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTcgc < 1:25910/151‑1 (MQ=21) ccGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTg < 1:2958332/128‑1 (MQ=255) ccGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGt < 2:2093697/151‑1 (MQ=18) cggaaCAGACGGAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTGCCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTa < 2:1529141/148‑1 (MQ=17) cGAAACGGGCGTAGGGGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTa < 2:1446062/151‑1 (MQ=17) cGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGGCTGCGAGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTa < 2:5223467/151‑1 (MQ=18) cGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTa < 1:1473338/151‑1 (MQ=18) gAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTaa > 2:4363845/1‑151 (MQ=255) aaaCAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTaaa < 1:919776/151‑1 (MQ=255) aaCAGACGTAGGGGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAc < 2:3439093/151‑1 (MQ=17) aCAGACGTAGGAGCCACTATCTTCCTTAAAATTGGAAAGGCCTGCGCGGACCCCCCGTAGGTACGGGTTTACCCACGAAGAAGCCGGCCCTGCTGGCCAATAACCAGACGCTGTTAACCAATGCTACCGCTAGCGTATTCGCGCGCAAAcc > 2:4477784/1‑151 (MQ=255) gACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGc > 1:1654214/1‑151 (MQ=255) aCGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCt < 1:5297833/151‑1 (MQ=255) aCGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCt < 1:2466960/151‑1 (MQ=17) tAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCt > 2:2540918/1‑151 (MQ=255) tAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCt > 2:3060567/1‑151 (MQ=255) gaGGGGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCt < 1:1842563/150‑1 (MQ=17) gAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca > 1:1254969/1‑151 (MQ=17) gAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca > 1:392289/1‑151 (MQ=17) gCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACAcc < 1:1484750/151‑1 (MQ=17) ccACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCt > 2:2465649/1‑151 (MQ=255) cACTATCTTGCTTAGCATGGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTg < 2:2152936/151‑1 (MQ=17) cACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGCAAACCCCCCGCTACACCTg > 2:809393/1‑151 (MQ=17) aCTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGa < 2:262137/151‑1 (MQ=255) tATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATc > 2:4179915/1‑151 (MQ=17) tATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATc < 2:3981926/151‑1 (MQ=255) tATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATc < 2:631870/151‑1 (MQ=255) aTCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCg > 1:1918390/1‑151 (MQ=17) aTCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCg < 1:2128290/151‑1 (MQ=17) aTCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCg < 1:532688/151‑1 (MQ=255) aTCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCg > 1:5002706/1‑151 (MQ=17) tCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCgg < 1:4957841/151‑1 (MQ=17) cTTGCTTAACATTGGAACGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggt < 2:566538/151‑1 (MQ=17) cTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGCTCggc > 1:81787/1‑150 (MQ=17) cTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggt < 2:1356923/151‑1 (MQ=255) tGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggtgg > 2:1206607/1‑151 (MQ=255) tGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggtgg > 1:842861/1‑151 (MQ=255) tGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggtgg < 1:548812/151‑1 (MQ=17) cTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTCCACCTGATCGgtcgtg > 2:1414464/1‑151 (MQ=17) cATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACTCGGTCCTACACCTGATCGGTGTTTGacat > 1:1603083/1‑150 (MQ=17) aTTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGCTCGGTGGCGGacaca > 1:4755544/1‑151 (MQ=17) ttGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGacacac > 2:2063326/1‑151 (MQ=17) tGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACGCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGCTGGTGGAcacaca > 2:4993186/1‑151 (MQ=17) gAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGCCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTCAACCCGCTCCTACACCTGAGCGGCGGTGGAcacacaat > 1:2430904/1‑149 (MQ=17) aaaGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGt < 2:1401640/151‑1 (MQ=255) aGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCg > 2:5416747/1‑151 (MQ=17) aGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCg < 1:2881626/151‑1 (MQ=255) ccTGCGCTGTCCCCCCGTAGGATCGGGTTGACCCGCGAAGAGGCCGGCCCTGGTGGCCAATCTCCACCGGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCgggg < 2:3609228/151‑1 (MQ=17) ccTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCgggg < 1:4051220/151‑1 (MQ=17) tGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAACCCCGCTCCTACACCTGATCGGTGGTCGACACACATGTCGGGGGt > 1:3552328/1‑151 (MQ=17) cgcgGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTg > 1:1438509/1‑151 (MQ=17) gTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGca < 1:4737865/151‑1 (MQ=17) ccccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGcaca < 2:51829/151‑1 (MQ=17) ccccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGcaca < 2:1254969/151‑1 (MQ=17) ccccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAGTGGTGGACACACATGTCGGGGGGTGGGcaca > 2:3828877/1‑151 (MQ=17) cccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAg < 1:140178/151‑1 (MQ=17) cccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAg < 1:1351477/151‑1 (MQ=255) ccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAgg > 1:4062536/1‑151 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAACCCCGCTCCTCCACCTGATCGGTGGTGGCCACACATGTCGGGGGTTGGGCACAGGCcgtc > 2:4121190/1‑151 (MQ=14) aGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGGAAACCCGCTCCTACACCTGATCGGTGGGGGACACACATGTCGGGGGGTGGGCACAGGCcggggggt > 2:4760368/1‑145 (MQ=17) ccggccCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTgcc > 1:373838/1‑42 (MQ=40) cggccCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTgccgc > 1:3381361/1‑43 (MQ=38) cggtggtgGCCAGTCGCCACGCGCCGGCCGCCGTTGCGGCCGCCGCCGTGTTCGCGGGTAAGCCCGCGCGTACACCTGAGCGGGGGTGGACACACATGTCGGGGGTTGGGCACAGACCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:4117045/145‑1 (MQ=9) ccTGCTGGCCAAGCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGCGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGcc < 2:2572129/151‑1 (MQ=14) ccTGCTGCCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGcc < 2:1043284/151‑1 (MQ=14) tgGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcac > 1:4259422/1‑151 (MQ=17) tgGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcac > 1:381772/1‑151 (MQ=255) ggCCAATCTCCACCCGCCGTTCCCCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca < 2:231909/151‑1 (MQ=17) ggCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTCCACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCCCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGTGGCCGGcaca > 1:1196563/1‑151 (MQ=17) ggCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca < 1:1093362/151‑1 (MQ=255) ggCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca < 1:2714233/151‑1 (MQ=255) ggCCAATCTCCACCCGCCGTCCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca < 2:1934204/151‑1 (MQ=255) ccAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAgg > 1:1696494/1‑151 (MQ=17) | GCGCCAAGGCATTCACGCGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGG > CP009974/382016‑382309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |