Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 2,119,948 G→C intergenic (+8/‑9) RPPX_09485 → / → RPPX_09490 ATP synthase F0F1 subunit I/ATP synthase F0F1 subunit A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099742,119,9480GC100.0% 961.2 / NA 267intergenic (+8/‑9)RPPX_09485/RPPX_09490ATP synthase F0F1 subunit I/ATP synthase F0F1 subunit A
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (146/121);  total (146/121)

Only 100 of 267 total aligned reads displayed.

TTGACGGCAGTGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTGAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGTTCCACCTG  >  CP009974/2119800‑2120094
                                                                                                                                                    |                                                                                                                                                  
   aCGGCAGTGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCa                                                                                                                                               <  1:4237180/151‑1 (MQ=255)
    cGGCAGTGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCaa                                                                                                                                              >  2:2446621/1‑151 (MQ=255)
      gCAGTGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAAcc                                                                                                                                            >  1:4859933/1‑151 (MQ=255)
      gCAGTGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAAcc                                                                                                                                            >  1:3595140/1‑151 (MQ=255)
        aGTGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCAt                                                                                                                                          >  2:1020031/1‑151 (MQ=255)
        aGTGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCAt                                                                                                                                          >  2:2150004/1‑151 (MQ=255)
          tGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATgg                                                                                                                                        <  1:1788413/151‑1 (MQ=255)
              ttttGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGgcagc                                                                                                                                    <  1:4427712/151‑1 (MQ=255)
                ttGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGcagcag                                                                                                                                  <  2:304192/151‑1 (MQ=255)
                 tGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGa                                                                                                                                 >  1:5232255/1‑151 (MQ=255)
                 tGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGa                                                                                                                                 <  2:3797313/151‑1 (MQ=255)
                   cACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGaaa                                                                                                                               >  1:728435/1‑151 (MQ=255)
                   cACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGCCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGCCAGCAGacc                                                                                                                               >  1:1474255/1‑149 (MQ=255)
                    aCTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAAc                                                                                                                              <  1:1573230/151‑1 (MQ=255)
                     cTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAAcc                                                                                                                             <  1:3776457/151‑1 (MQ=255)
                      tGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCg                                                                                                                            <  1:5154896/151‑1 (MQ=255)
                         ccTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCtt                                                                                                                         >  2:797700/1‑151 (MQ=255)
                         ccTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCtt                                                                                                                         <  1:1997428/151‑1 (MQ=255)
                          cTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTc                                                                                                                        >  1:3827761/1‑151 (MQ=255)
                          cTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTc                                                                                                                        <  1:2122107/151‑1 (MQ=255)
                            ttGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCgg                                                                                                                      >  1:4923974/1‑151 (MQ=255)
                            ttGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCgg                                                                                                                      >  1:3266464/1‑151 (MQ=255)
                                 ggAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCtat                                                                                                                 >  2:2404730/1‑151 (MQ=255)
                                    gTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATc                                                                                                              >  1:2732185/1‑151 (MQ=255)
                                     tGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATcc                                                                                                             <  1:3439070/151‑1 (MQ=255)
                                      gAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCa                                                                                                            <  1:2504481/151‑1 (MQ=255)
                                       aaGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAg                                                                                                           <  1:4326993/151‑1 (MQ=255)
                                        aGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGc                                                                                                          >  2:558738/1‑151 (MQ=255)
                                         gCCACTGGCGCCGCGAGCAGTATTCGGCTTCTTCGTGTGTACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGca                                                                                                         <  2:4434895/151‑1 (MQ=255)
                                              tGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACt                                                                                                    >  1:3470231/1‑151 (MQ=255)
                                                gcgcCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTg                                                                                                  >  1:1353066/1‑151 (MQ=255)
                                                  gccgcTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTCTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAACCCGCTTCGGGCTATATCCAGCACCACTTGcc                                                                                                >  2:4240546/1‑150 (MQ=255)
                                                    cgcTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGa                                                                                              >  2:410174/1‑151 (MQ=255)
                                                     gcTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTCCAGaa                                                                                             >  2:4584798/1‑151 (MQ=255)
                                                       tAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAAcc                                                                                                                                            >  2:1651487/1‑102 (MQ=255)
                                                       tAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAAcc                                                                                                                                            <  1:1651487/102‑1 (MQ=255)
                                                       tAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAAcc                                                                                           <  2:1083716/151‑1 (MQ=255)
                                                       tAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAAcc                                                                                           <  1:5132462/151‑1 (MQ=255)
                                                        aGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCt                                                                                          >  1:2305656/1‑151 (MQ=255)
                                                        aGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCt                                                                                          >  2:1473285/1‑151 (MQ=255)
                                                           aGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTgcc                                                                                       >  2:4714497/1‑149 (MQ=255)
                                                           aGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGAc                                                                                       <  2:1400980/151‑1 (MQ=255)
                                                               ttCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTAc                                                                                   <  2:2214541/151‑1 (MQ=255)
                                                               ttCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTAc                                                                                   <  2:3299415/151‑1 (MQ=255)
                                                               ttCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTAc                                                                                   <  2:334837/151‑1 (MQ=255)
                                                               ttCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCACCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTaa                                                                                   >  2:1159243/1‑150 (MQ=255)
                                                                 cGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACgg                                                                                 >  1:4167075/1‑151 (MQ=255)
                                                                  ggCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGt                                                                                <  1:5383648/151‑1 (MQ=255)
                                                                  ggCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGt                                                                                <  2:3619692/151‑1 (MQ=255)
                                                                      tCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAAc                                                                            >  1:3143276/1‑151 (MQ=255)
                                                                       cTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAAcc                                                                           >  2:4333239/1‑150 (MQ=255)
                                                                          cGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTAcc                                                                        <  1:3029220/151‑1 (MQ=255)
                                                                           gtgtTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCa                                                                       <  1:2771924/151‑1 (MQ=255)
                                                                            tgtTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAg                                                                      >  2:1561700/1‑151 (MQ=255)
                                                                               tGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACg                                                                   >  2:4596295/1‑151 (MQ=255)
                                                                                 aCCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGc                                                                 <  1:449802/151‑1 (MQ=255)
                                                                                     ttttGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTAGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCt                                                             <  1:651936/151‑1 (MQ=255)
                                                                                        tGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACTAGACGGCAGCTggg                                                          >  1:4593551/1‑151 (MQ=255)
                                                                                        tGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTggg                                                          <  2:259897/151‑1 (MQ=255)
                                                                                         ggTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCGCCACTTGCAGAACCTGACCTACGGTCAACTCCCAGACGGCCGCTgggg                                                         >  2:2737176/1‑151 (MQ=255)
                                                                                            cAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCtt                                                      <  1:885050/151‑1 (MQ=255)
                                                                                            cAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCtt                                                      <  1:1900853/151‑1 (MQ=255)
                                                                                               cTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGc                                                   >  1:4620995/1‑151 (MQ=255)
                                                                                                 ggTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGccc                                                 >  1:1274200/1‑151 (MQ=255)
                                                                                                  gTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCa                                                >  1:3724901/1‑151 (MQ=255)
                                                                                                      gcgcCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCg                                            <  2:967933/151‑1 (MQ=255)
                                                                                                      gcgcCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCg                                            <  1:4718422/151‑1 (MQ=255)
                                                                                                       cgcCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGACACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCgg                                           >  2:1323872/1‑151 (MQ=255)
                                                                                                        gcCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGc                                          >  1:3364259/1‑151 (MQ=255)
                                                                                                         ccccTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCt                                         >  2:4979688/1‑151 (MQ=255)
                                                                                                         ccccTGCTGATGAATAAAAGACTTTCGAGACCTGAGGGCGTTTCAGCCAACCATGGCAGCAGAAACCGCGTCGGGCTATATCCAGCACCACATGCAGAACCTGACCGACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCt                                         <  2:22320/151‑1 (MQ=255)
                                                                                                          cccTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTg                                        <  1:1099284/151‑1 (MQ=255)
                                                                                                            ctgctgATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGCCCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTgaa                                      >  2:4874741/1‑149 (MQ=255)
                                                                                                            ctgctgATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCa                                      <  1:890116/151‑1 (MQ=255)
                                                                                                            ctgctgATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCa                                      >  1:5430854/1‑151 (MQ=255)
                                                                                                             gggtgaggaATGAGAGACTGTGGAGGCCTTAGGGCGTTGCAGGCAACCATGGCAGCAGAAGCCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAg                                     <  2:4747506/148‑1 (MQ=255)
                                                                                                              gctgATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACTGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGa                                    >  1:1158761/1‑151 (MQ=255)
                                                                                                              gctgATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGa                                    >  1:101403/1‑151 (MQ=255)
                                                                                                              gctgATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGa                                    >  1:1682077/1‑151 (MQ=255)
                                                                                                                tgatgaATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAg                                  >  1:2974368/1‑151 (MQ=255)
                                                                                                                tgatgaATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAg                                  >  1:4785447/1‑151 (MQ=255)
                                                                                                                 gatgaATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGc                                 >  2:5373502/1‑151 (MQ=255)
                                                                                                                  atgaATAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGcc                                >  2:1859398/1‑151 (MQ=255)
                                                                                                                      aTAAAAGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAgg                            >  1:258424/1‑151 (MQ=255)
                                                                                                                         aaaGACTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCaa                         <  1:2825563/151‑1 (MQ=255)
                                                                                                                             aCTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATggg                     >  2:672739/1‑151 (MQ=255)
                                                                                                                              cTTTCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGc                    <  1:5256600/151‑1 (MQ=255)
                                                                                                                               tttCGAGACCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCAtt                                              <  2:4563342/124‑1 (MQ=255)
                                                                                                                                   gagaCCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCACCTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTg               >  2:5134709/1‑151 (MQ=255)
                                                                                                                                    agaCCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTgg              <  1:4552324/151‑1 (MQ=255)
                                                                                                                                    agaCCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTgg              >  1:2452755/1‑151 (MQ=255)
                                                                                                                                      aCCTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGc            <  1:4030789/151‑1 (MQ=255)
                                                                                                                                        cTTAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGt          <  2:276235/151‑1 (MQ=255)
                                                                                                                                         ttAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGtt         >  1:3911691/1‑151 (MQ=255)
                                                                                                                                          tAGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGTTc        <  2:3955198/151‑1 (MQ=255)
                                                                                                                                           aGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGTTcc       >  1:1269003/1‑151 (MQ=255)
                                                                                                                                           aGGGCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGTTcc       >  1:4378306/1‑151 (MQ=255)
                                                                                                                                            gggCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGTTCCa      >  1:498809/1‑151 (MQ=255)
                                                                                                                                             ggCGTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGTTCCAc     <  1:489179/151‑1 (MQ=255)
                                                                                                                                                gTTTCAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGTTCCACCTg  <  2:2285799/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TTGACGGCAGTGCTTTTTGCACTGACCTTTGCAGGAGTGAAGCCACTGGCGCCGCTAGCAGTATTCGGCGTCTTCGTGTTGACCCTTTTGGTCAGCTGGTTCGCGCCCCTGCTGATGAATAAAAGACTTTCGAGACCTTAGGGCGTTTGAGGCAACCATGGCAGCAGAAACCGCTTCGGGCTATATCCAGCACCACTTGCAGAACCTGACCTACGGTCAACTACCAGACGGCAGCTGGGGCTTCGCCCATTCGGCTGCAGAAGCCAAGGCAATGGGCTTCTGGGCGTTCCACCTG  >  CP009974/2119800‑2120094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑