BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	3,793,987	2 bp→CC	coding (293‑294/3894 nt)	RPPX_16900 →	YD repeat‑/RHS repeat‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	3,793,987	0	T	C	99.6%	734.7 / NA	223	V98A (GTT→GCC)	RPPX_16900	YD repeat‑/RHS repeat‑containing protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (108/114); minor base A (0/1); total (108/115)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*	CP009974	3,793,988	0	T	C	99.6%	734.9 / NA	223	V98A (GTT→GCC)	RPPX_16900	YD repeat‑/RHS repeat‑containing protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (107/115); minor base G (1/0); total (108/115)
Fisher's exact test for biased strand distribution p-value = 4.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 223 total aligned reads displayed.

GTGACGTTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGTTGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACGTCAG  >  CP009974/3793842‑3794131

||

  gacgtTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCt                                                                                                                                           <  1:2164473/151‑1 (MQ=255)

  gacgtTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTGGTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCt                                                                                                                                           <  2:2816671/151‑1 (MQ=255)

  gacgtAGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGCTTAGGAACAGGCTGAAACCAGCGCACCACCGAATTCGACCCTGCCCCGAACCGCCGGAACATTTCCCTGGCCAATGGCGAAACGCTCCACGCCGACGGCCGCGCCGgcgcc                                                                                                                                           >  2:5190421/1‑150 (MQ=21)

  gacggTGCGCTATAGCCCGCGCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCt                                                                                                                                           <  2:2501106/151‑1 (MQ=255)

   acgtTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCGGGCGCTa                                                                                                                                          >  1:4790394/1‑151 (MQ=255)

       tGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTaccaa                                                                                                                                      <  2:1610881/151‑1 (MQ=255)

         cgcTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTaccaacc                                                                                                                                    >  1:2298181/1‑151 (MQ=255)

          gcTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCCCTaccaacca                                                                                                                                   >  2:20/1‑151 (MQ=255)

           cTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAg                                                                                                                                  <  1:2468094/151‑1 (MQ=255)

           cTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAg                                                                                                                                  >  2:862508/1‑151 (MQ=255)

              taGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTg                                                                                                                               >  1:4038604/1‑151 (MQ=255)

                  ccGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGa                                                                                                                           <  2:4629081/151‑1 (MQ=255)

                   cGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGAt                                                                                                                          <  1:2270893/151‑1 (MQ=255)

                    gCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATg                                                                                                                         <  1:1493400/151‑1 (MQ=255)

                     cTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGt                                                                                                                        >  1:1564025/1‑151 (MQ=255)

                      tCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTc                                                                                                                       <  1:896107/151‑1 (MQ=255)

                      tCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTc                                                                                                                       >  2:3986224/1‑151 (MQ=255)

                       cAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCg                                                                                                                      <  1:4491844/151‑1 (MQ=255)

                        aGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCCACCAGTTGACGATGTCgg                                                                                                                     >  1:1815934/1‑151 (MQ=255)

                         gCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGga                                                                                                                    <  2:928940/151‑1 (MQ=255)

                          ccTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGCTGTCGgag                                                                                                                   >  2:3582761/1‑151 (MQ=255)

                              gCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGaaaa                                                                                                               >  1:4156573/1‑151 (MQ=255)

                                cGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAg                                                                                                             >  1:4071642/1‑151 (MQ=255)

                                 gACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGAGGGCCGTGCCGGCGCTCCCAACCAGTTGACGATGTCGGAGAAAACGa                                                                                                            >  2:4746690/1‑151 (MQ=18)

                                 gACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGa                                                                                                            <  1:1339514/151‑1 (MQ=255)

                                  aCAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGAt                                                                                                           <  1:1885083/151‑1 (MQ=255)

                                     gTGGTTTTGGTACAAGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGa                                                                                                        <  2:4209005/151‑1 (MQ=255)

                                        gTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGacac                                                                                                     <  2:2072088/151‑1 (MQ=255)

                                        gTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGacac                                                                                                     >  1:747619/1‑151 (MQ=255)

                                        gTTGTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGacac                                                                                                     <  2:1355735/151‑1 (MQ=255)

                                          ttttGTACAGGCGGGAACCGGCGCACCACCGACTTCGACCCTGCCCAGAGCCGCCGCTTCATCTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGt                                                                                                   <  1:4414718/151‑1 (MQ=14)

                                          tttGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGAAGAAGAAAAAAAAAAAGATCGACACGt                                                                                                   <  2:5045319/151‑1 (MQ=17)

                                              gTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCa                                                                                               <  2:72504/151‑1 (MQ=255)

                                              gTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCa                                                                                               >  2:178056/1‑151 (MQ=255)

                                                aCAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCAcc                                                                                             >  1:4598703/1‑151 (MQ=255)

                                                  aGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCtt                                                                                           >  1:2031603/1‑151 (MQ=255)

                                                    gCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGTGCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATTGACACGTTCCACCttct                                                                                         >  2:372106/1‑149 (MQ=14)

                                                    gCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTa                                                                                         <  2:1465522/151‑1 (MQ=255)

                                                     cTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTAt                                                                                        >  2:1062624/1‑151 (MQ=255)

                                                      tGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATg                                                                                       <  2:3386930/151‑1 (MQ=255)

                                                         aaCCTGCGCACCACAGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAgg                                                                                    <  1:4120767/151‑1 (MQ=255)

                                                          aCCTGCGCACCACCGAAGTCGACCCAGCCCAGAACCGCCGCATCATTGCCCTGGCCACTGGCGAAACCTTCAAAGCCGACGGCCGTGCCGGCTCTACCAGCCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGa                                                                                   <  2:2726831/151‑1 (MQ=14)

                                                            cTGCACACCCCCGAATTACACACTGCCCAGAACCGCCGGATCATTTCCCTGGTCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTACACCTTTATGAGGACg                                                                                 <  2:3166946/151‑1 (MQ=14)

                                                             tGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGc                                                                                >  2:438079/1‑151 (MQ=255)

                                                              gcgcACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCt                                                                               <  1:1192091/151‑1 (MQ=255)

                                                               cgcACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTg                                                                              >  2:1837597/1‑151 (MQ=255)

                                                                gcACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGa                                                                             >  2:1283038/1‑151 (MQ=255)

                                                                  accaccGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAg                                                                           >  2:3760681/1‑151 (MQ=255)

                                                                   ccaccGAATGCGACCCTGCCCAGAACCGCCGGATCATTGCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGa                                                                          <  2:5324493/151‑1 (MQ=255)

                                                                     accGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGAcc                                                                        >  1:3294871/1‑151 (MQ=255)

                                                                     accGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGAcc                                                                        >  2:4143933/1‑151 (MQ=255)

                                                                      ccGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCg                                                                       <  1:3831219/151‑1 (MQ=255)

                                                                        gAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCt                                                                     >  2:4417171/1‑151 (MQ=255)

                                                                        gAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCt                                                                     <  2:1686374/151‑1 (MQ=255)

                                                                             cGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCgg                                                                >  1:1715276/1‑151 (MQ=255)

                                                                             cGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCgg                                                                <  1:5364027/151‑1 (MQ=255)

                                                                             cGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCgg                                                                <  1:5013123/151‑1 (MQ=255)

                                                                               aCCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGggt                                                              >  2:4889820/1‑151 (MQ=255)

                                                                                cccTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGggtg                                                             <  2:2793634/151‑1 (MQ=255)

                                                                                cccTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGggtg                                                             <  1:3279/151‑1 (MQ=255)

                                                                                 ccTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTAt                                                                                        <  1:946904/123‑1 (MQ=255)

                                                                                   tGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGgtggtg                                                          <  1:862508/151‑1 (MQ=255)

                                                                                    gCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGc                                                         <  1:3893989/151‑1 (MQ=255)

                                                                                    gCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGc                                                         <  2:2606077/151‑1 (MQ=255)

                                                                                     cccAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCa                                                        <  2:2235784/151‑1 (MQ=255)

                                                                                      ccAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCAc                                                       >  1:3051872/1‑151 (MQ=255)

                                                                                       cAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCAcc                                                      <  1:38756/151‑1 (MQ=255)

                                                                                          aaCCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCt                                                   <  2:5277156/151‑1 (MQ=255)

                                                                                           cccgccgGATCATTTCCCTGGCCAGTGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTc                                                  <  2:5387998/150‑1 (MQ=255)

                                                                                           aCCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTc                                                  <  1:4955496/151‑1 (MQ=255)

                                                                                           aCCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTc                                                  >  2:4084640/1‑151 (MQ=255)

                                                                                               ccgGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGc                                              <  1:438079/151‑1 (MQ=16)

                                                                                                   aTCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTAGGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCgtgg                                          >  2:5257495/1‑151 (MQ=255)

                                                                                                       tttCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGa                                      <  2:2363625/151‑1 (MQ=19)

                                                                                                         tCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAg                                    >  2:616616/1‑151 (MQ=19)

                                                                                                          cccTGGCCGATGGCGAAACGTTCAAAGCCGACGGCCGGGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGt                                   <  1:3237636/151‑1 (MQ=255)

                                                                                                           ccTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTg                                  >  2:432719/1‑151 (MQ=255)

                                                                                                              ggCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTc                               <  2:1480415/151‑1 (MQ=255)

                                                                                                              ggCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTc                               <  1:2357950/151‑1 (MQ=255)

                                                                                                              ggCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTc                               <  2:3762026/151‑1 (MQ=21)

                                                                                                                ccAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGa                             >  1:1258295/1‑151 (MQ=255)

                                                                                                                  aaTGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGc                           >  2:3100850/1‑151 (MQ=255)

                                                                                                                     ggCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGaa                        <  1:2462460/151‑1 (MQ=255)

                                                                                                                      gCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGaaa                       >  2:3347622/1‑151 (MQ=255)

                                                                                                                        gAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGCCACGTCCCACCTTTATGAGGACGCTGAAGACCGCTCGCGGGTGGTGCACCCCCCCGCCGCGGCGGACGCGCCCGAGCGaccac                     >  2:4112975/1‑147 (MQ=11)

                                                                                                                          aaCGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGt                   <  2:341668/151‑1 (MQ=255)

                                                                                                                             gTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCg                >  1:27026/1‑151 (MQ=21)

                                                                                                                             gTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCg                >  2:3093123/1‑151 (MQ=255)

                                                                                                                               tCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAg              <  1:1062624/151‑1 (MQ=255)

                                                                                                                               tCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAg              <  1:3542083/151‑1 (MQ=255)

                                                                                                                                cAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGc             <  1:3760681/151‑1 (MQ=255)

                                                                                                                                 aaaGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGt                                   >  1:123635/1‑128 (MQ=255)

                                                                                                                                 aaaGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGcc            >  2:2941571/1‑151 (MQ=255)

                                                                                                                                  aaGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGccc           >  2:4401854/1‑151 (MQ=255)

                                                                                                                                       gACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACg      <  1:1928237/151‑1 (MQ=255)

                                                                                                                                       gACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACg      >  1:1652998/1‑151 (MQ=255)

                                                                                                                                       gACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACg      <  1:2019546/151‑1 (MQ=255)

                                                                                                                                       gACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACg      >  2:2441627/1‑151 (MQ=255)

                                                                                                                                       gACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGCTCGAGCCCGTACg      >  2:3908455/1‑151 (MQ=255)

                                                                                                                                           gCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACGTCAg  <  1:3719841/151‑1 (MQ=255)

||

GTGACGTTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGTTGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACGTCAG  >  CP009974/3793842‑3794131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`