Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP009974 | 1,346,042 | 2 bp→GT | intergenic (+365/+561) | RPPX_05935 → / ← RPPX_05940 | ATPase AAA/DNA‑binding protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009974 | 1,346,042 | 0 | A | G | 99.6% | 888.7 / NA | 249 | intergenic (+365/+562) | RPPX_05935/RPPX_05940 | ATPase AAA/DNA‑binding protein |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (123/125); minor base C (0/1); total (123/126) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
* | CP009974 | 1,346,043 | 0 | C | T | 99.2% | 900.6 / NA | 249 | intergenic (+366/+561) | RPPX_05935/RPPX_05940 | ATPase AAA/DNA‑binding protein |
Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (121/125); total (123/126) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.45e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 249 total aligned reads displayed.
GGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGACCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCCGCGAGATCCTGAG > CP009974/1345897‑1346186 || tCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTggg < 1:1078954/151‑1 (MQ=255) tCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTggg > 1:1290442/1‑151 (MQ=255) tCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTggg < 2:2344662/151‑1 (MQ=255) gCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGaa < 2:3742912/151‑1 (MQ=255) cTGATCAAGAAGCGCTTATCGTCACCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAAt < 1:229761/151‑1 (MQ=255) gATCAAGAAGCGCTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAAttt < 1:4040259/151‑1 (MQ=255) aagaagCGCTTATCGTCGCAGATCAATCCAACGCGGCCATCCGTACCTGAAACCAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCAt < 2:2858063/151‑1 (MQ=255) agaagCGCTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAAGGATCAAGGCCCCCGCGGTCTGTGGGGAATTTCCAtt > 1:4224643/1‑151 (MQ=255) cgcTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCt > 2:3578084/1‑151 (MQ=255) cTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTgg < 1:1762634/151‑1 (MQ=255) ttATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGa < 2:4713166/151‑1 (MQ=255) tcgCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCg < 1:3404251/151‑1 (MQ=255) cgCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCgg > 1:999576/1‑151 (MQ=255) gCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGc > 2:3546104/1‑151 (MQ=255) ccGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGct < 1:2442036/151‑1 (MQ=255) gATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGctct > 1:4701789/1‑151 (MQ=255) gATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGctct < 2:1642589/151‑1 (MQ=255) tCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTa > 2:2953106/1‑151 (MQ=255) aaaTCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTAc < 2:444559/150‑1 (MQ=255) aaTCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACg > 2:3846770/1‑151 (MQ=255) aTCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGa < 2:494448/151‑1 (MQ=255) tCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGAc > 1:2809221/1‑151 (MQ=255) tCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGAc < 2:1991443/151‑1 (MQ=255) cAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCg < 1:2614700/151‑1 (MQ=255) acGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAg > 2:2853100/1‑151 (MQ=255) acGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAg < 1:4509586/151‑1 (MQ=255) ggCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTGTCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCa < 2:2138502/151‑1 (MQ=255) ggCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCa < 1:3520836/151‑1 (MQ=255) gCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCaa > 1:1742530/1‑151 (MQ=255) cATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAgg < 1:743279/151‑1 (MQ=255) aTCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAggg > 2:3064201/1‑151 (MQ=255) cGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTCTCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAt < 2:3233394/151‑1 (MQ=255) gTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAtc < 2:373010/151‑1 (MQ=255) gTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAtc < 1:649437/151‑1 (MQ=255) tACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAtct < 2:1227183/151‑1 (MQ=255) aCCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAtctc < 1:4480731/151‑1 (MQ=255) aCCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAtctc < 1:2077295/151‑1 (MQ=255) aCCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAtctc < 2:1789590/151‑1 (MQ=255) aCCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAtctc < 2:1789099/151‑1 (MQ=255) aCCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCAtctc < 2:1561935/151‑1 (MQ=255) aCCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCCCTCACGACCGGGAGCAAGGGCAtctc > 1:2522543/1‑151 (MQ=255) cTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCAt > 1:2028314/1‑151 (MQ=255) tGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATg < 1:4374534/151‑1 (MQ=255) tGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATg > 1:2979837/1‑151 (MQ=255) gAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGa > 2:269658/1‑151 (MQ=255) gAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGa > 2:912924/1‑151 (MQ=255) aacaaacCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATc < 2:4168307/151‑1 (MQ=255) caaacCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTg > 1:1958947/1‑151 (MQ=255) aaacCACTGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTgg < 1:2001505/151‑1 (MQ=255) aaacCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTgg > 2:938462/1‑151 (MQ=255) aaacCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTgg > 1:5193137/1‑151 (MQ=255) aacCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGc > 1:2781043/1‑151 (MQ=255) acCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGca < 1:326827/151‑1 (MQ=255) acCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGca < 1:4254597/151‑1 (MQ=255) cAATGTGTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGTcaca < 2:4473773/151‑1 (MQ=255) gTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGa > 1:3123090/1‑151 (MQ=255) tttGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAac > 1:5403820/1‑151 (MQ=255) tttGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAac < 2:3378166/151‑1 (MQ=255) tttGCAGATCCTCGCCACACGTCATCCCGCCAAGAACGCTGCGTGTTATCAGGGATCAAGGCCGCTGCGGTCCGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGCGCAAGGGCGCCTCCTGATCTGGcacccggacc > 2:4771772/1‑144 (MQ=255) ttGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAaca > 2:3967730/1‑151 (MQ=255) tGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAacac < 2:1215751/151‑1 (MQ=255) gCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACAcc < 1:1688417/151‑1 (MQ=255) aGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCtt < 2:4517858/151‑1 (MQ=255) tCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTAc < 1:4958141/151‑1 (MQ=255) cTCGCCACACATCATCCCGCGAAGACTGCTGAGTCTTATCAGGGATCCAGGCCCCTGCGCTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGCCCGGCAGCAACGGCATCTCATGATCTGGCACACTGACCACCTTTACCg < 2:427770/151‑1 (MQ=255) cGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGCACACCTTTACCggg > 2:761028/1‑150 (MQ=255) gCCACACGTCATCCCGCCTAGGATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTg < 2:109766/151‑1 (MQ=255) ccACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTgg < 2:5144648/151‑1 (MQ=255) ccACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTgg < 2:5385940/151‑1 (MQ=255) cacaCGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTggg < 1:3236018/151‑1 (MQ=255) cacaCGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTggg < 1:3073467/151‑1 (MQ=255) cGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGt > 2:4926080/1‑151 (MQ=255) cGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGt > 1:219587/1‑151 (MQ=255) gTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTg > 1:1032054/1‑151 (MQ=255) cATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGCCCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGa < 1:2411119/151‑1 (MQ=255) cATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGa > 2:1899531/1‑151 (MQ=255) ccGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCt > 2:1721291/1‑151 (MQ=255) ccGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCt > 2:3440756/1‑151 (MQ=255) ccGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCt < 1:2105609/151‑1 (MQ=255) aaGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATc > 1:5027144/1‑151 (MQ=255) aaTGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGc > 2:3634969/1‑151 (MQ=255) tGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTg < 1:4686594/151‑1 (MQ=255) ggCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGGCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTg < 2:1479805/150‑1 (MQ=255) gCTGAGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGa < 1:439829/151‑1 (MQ=255) aGTGTTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACgag < 2:2472028/151‑1 (MQ=255) gtgtTATCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACgaga < 1:3983876/151‑1 (MQ=255) aTCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAgc < 1:1548527/151‑1 (MQ=255) tCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGCTCCGGCAAACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAgcg < 2:2045654/151‑1 (MQ=25) tCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAgcg < 1:3636705/151‑1 (MQ=255) tCAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAgcg > 2:3267298/1‑151 (MQ=255) cAGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAgcgc < 2:5062478/151‑1 (MQ=255) aGGGATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGcgcc > 2:2632008/1‑151 (MQ=255) ggATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGcgccgc > 1:5298995/1‑151 (MQ=255) gATCAAGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCcgcg < 1:1868778/151‑1 (MQ=255) aaGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCCGCGAGAt > 1:3388474/1‑151 (MQ=255) aaGGCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCCGCGAGAt > 2:5324371/1‑151 (MQ=255) ggCCCCTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCCGCGAGATcc > 2:4248551/1‑151 (MQ=255) cccTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCCGCGAGATCCTGa > 2:801545/1‑151 (MQ=255) cccTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGCAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCCGCGAGATCCTGa < 1:3196073/151‑1 (MQ=255) ccTGCGGTCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCCGCGAGATCCTGAg < 2:3401229/151‑1 (MQ=255) || GGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCCAACACGGCCATCCGTACCTGAAACAAACCAATGTTTTGCAGATCCTCGCCACACGTCATCCCGCCAAGAATGCTGAGTGTTATCAGGGATCAAGGCCCCTGCGACCTGTGGGGAATTTCCATTTCGCTGGACTAGCGGCTCTTACGACCGGGAGCAAGGGCATCTCATGATCTGGCACACTGAACACCTTTACCGGTGGGCGGTGGAGGCTGCATCGGCTGACGAGACCAGCGCCGCGAGATCCTGAG > CP009974/1345897‑1346186 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |