| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,128,011 | (G)8→7 | intergenic (+144/‑182) | RPPX_13940 → / → RPPX_13945 | alpha/beta hydrolase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,128,004 | 0 | G | . | 99.6% | 1172.1 / ‑2.4 | 223 | intergenic (+137/‑189) | RPPX_13940/RPPX_13945 | alpha/beta hydrolase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base . (104/117); total (105/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 236 total aligned reads displayed.
GCGTGGTCATGACGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCGGGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTGCGCTATTGCCTTTATC > CP009974/3127856‑3128150 | gCGTGGTCATGACGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCggg < 2:4511200/151‑1 (MQ=255) cGTGGGCATGACGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCgggg < 1:24417/151‑1 (MQ=255) gTGGTCATGACGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCggggg < 1:3758480/151‑1 (MQ=255) ggTCATGACGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCggggggg > 1:3460479/1‑151 (MQ=255) gTCATGACGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCggggggga < 2:4981971/151‑2 (MQ=255) aCGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAATTCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGccc < 2:1503916/151‑1 (MQ=255) aCGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGccc > 2:2289755/1‑151 (MQ=255) aCGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGccc > 2:909045/1‑151 (MQ=255) cGAGACTTTGCGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCt < 2:1914347/151‑1 (MQ=255) agaCTTTGAGCGGGCAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTc < 2:1757975/151‑1 (MQ=255) gaCTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCa < 2:2998013/151‑1 (MQ=255) aCTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCaa > 1:4884475/1‑151 (MQ=255) cTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAg < 1:5073755/151‑1 (MQ=255) cTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAg > 2:1367697/1‑151 (MQ=255) ccgaacacCCAGGGTACGTGTACACACGCCAAAAAAAACGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGcc < 2:564257/147‑1 (MQ=255) ccGGACAACCAGGGTACATGTTCAGACACCAAAAAAAAGGCCGCTGCAAGCCACAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGcc < 1:2038873/150‑1 (MQ=255) ggccAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAg < 2:2261768/148‑1 (MQ=255) aCAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTg < 1:4868214/151‑1 (MQ=255) aCAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTg < 1:3088527/151‑1 (MQ=255) cAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCa < 1:3290450/151‑1 (MQ=255) cAGGGTACACGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGCCGGTGACCCTCGCAGGCATGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCCGTGAGTCa > 2:4926412/1‑151 (MQ=255) aGGGTACATGTTCAGACGCC‑AAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAg > 1:2859505/1‑151 (MQ=255) tACATGTTCAGACGGAAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAAt < 2:2796241/151‑1 (MQ=255) aCATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATa > 1:918750/1‑151 (MQ=255) cATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAACGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATaa < 1:689597/151‑1 (MQ=255) aaTGGTCAGAAGCAAAGAAAAAGGCGGCTGCAAGCCGCAGCGGACAATCGGGACGTCGGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATaa < 2:3631861/150‑1 (MQ=255) aTGTTCAGGCGACAAAAAAAAGGCCGATGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAg < 2:4180970/151‑1 (MQ=255) aTGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAg < 1:2932813/151‑1 (MQ=255) aTGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAg > 1:883254/1‑151 (MQ=255) tGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAgc > 1:2448996/1‑151 (MQ=255) ttCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAgcgc > 2:3199517/1‑151 (MQ=255) cAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCtt < 1:1558138/151‑1 (MQ=255) gACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGa < 1:1043814/151‑1 (MQ=255) ggcAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATcc < 2:4215129/149‑1 (MQ=255) gCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATcc > 1:2586691/1‑151 (MQ=255) gCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATcc > 1:548803/1‑151 (MQ=255) ccAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGAAGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCg < 1:1454845/151‑1 (MQ=255) cAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCACTCGAGACGTCAGATCAAGGAGCTCCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCTAGCCGGCCAGTGAGTCAAGAATAAGCGCTCGATCCgc > 2:1218503/1‑150 (MQ=255) aaaaaaaaGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTc > 1:1703623/1‑151 (MQ=255) aaaaaGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAgg > 1:3845458/1‑151 (MQ=255) aaaaaGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAgg < 2:1153676/151‑1 (MQ=255) aaaaaGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAgg > 1:2234888/1‑151 (MQ=255) aaGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGaaa > 2:219263/1‑151 (MQ=255) gCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAAt < 2:306622/151‑1 (MQ=255) cggtgacagcagcAGGGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAg < 2:1015955/144‑1 (MQ=255) gCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGc > 1:2769772/1‑151 (MQ=255) gCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGc > 1:3487663/1‑151 (MQ=255) tGCAAGCCACAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAATCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCtt < 2:480459/151‑1 (MQ=255) cAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCt < 1:4421663/151‑1 (MQ=255) aaGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGGGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCCGGAAAAATAGCTTCTg > 1:4562496/1‑151 (MQ=255) aaGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTg > 1:3699409/1‑151 (MQ=255) ccGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCg > 1:218617/1‑151 (MQ=255) ccGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCg > 2:27707/1‑151 (MQ=255) ccGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCg > 2:2641254/1‑151 (MQ=255) ccGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCg > 2:2611141/1‑151 (MQ=255) ccGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCg < 2:1648234/151‑1 (MQ=255) ccGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCg > 1:4484870/1‑151 (MQ=255) gCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGAc > 1:2990289/1‑151 (MQ=255) gCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGAc < 2:2816812/151‑1 (MQ=255) cAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACa > 2:1076044/1‑151 (MQ=255) aGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACAt > 1:3793266/1‑151 (MQ=255) aGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACAt > 1:1164368/1‑151 (MQ=255) gCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACAtt < 1:4727408/151‑1 (MQ=255) cGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTc < 1:1763533/151‑1 (MQ=255) ggCCAATCGAGACGTCAGATCAACGAGCTTCAAAATCGACGATGGTGGACTTGTCGGGCAAGAAAGGC‑GCGGGGGAGAGCCGTTCAACCCGGCCAGTGAGGCAAGAATGAGCGCTTGATCCGTCAGGAAAAAGAGCTTCTGTCGACATTCa < 2:4612121/151‑1 (MQ=255) ccAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGGACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCAcc < 2:4039108/151‑1 (MQ=255) cAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCg < 1:2620049/151‑1 (MQ=255) aaTCGAGGCGTCAGATCAAGGAGCTTCAAAATCTGCGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGt < 2:2458009/151‑1 (MQ=255) aaTCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGt < 2:718465/151‑1 (MQ=255) aaTCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGt < 2:3291812/151‑1 (MQ=255) aaTCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGt > 1:2679718/1‑151 (MQ=255) aTCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGtt < 2:4712609/151‑1 (MQ=255) aTCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGtt > 1:764785/1‑151 (MQ=255) cGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGTAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTAc < 1:638006/151‑1 (MQ=255) cGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTAc > 2:313120/1‑151 (MQ=255) gagaCGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACg < 2:3036517/151‑1 (MQ=255) cGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTc < 2:4866298/151‑1 (MQ=255) cGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTc < 2:3525267/151‑1 (MQ=255) cGTAAGATAAGGGGGCTTCAAAATCTACGTGGGTGAACCGGGCAGGCTGGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGAAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTc < 2:4562496/151‑1 (MQ=255) tCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAg > 2:2143586/1‑151 (MQ=255) aGATCAAGAAGCTGCAAAATTTGAGT‑GGGGGACCTTGCAGGGTTGGAAACGGGGGGGGCTGACCCCTTCAAGCCGGCCAGTGATTCACGAATAAGCGCTTGATCAGAAAGAAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGc < 2:526559/151‑1 (MQ=255) aTCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCa > 1:1004038/1‑107 (MQ=255) cAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACa < 1:4036631/151‑1 (MQ=255) cAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACa > 1:4119592/1‑151 (MQ=255) gCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCa > 1:5172096/1‑151 (MQ=255) tCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGt < 2:2985210/151‑1 (MQ=255) cAATATCTACGTCGGTGAACCTGGCAGGCTTGAATGG‑TGGGGGGGTGAGCACTTCATGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAATAATAGCTTCTGGGGACATTCACCGTTACGTTTCAGGCAACAGCGCCAAggg > 2:92863/1‑149 (MQ=255) aaaTCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCt < 1:3304452/151‑1 (MQ=255) aaaTCTACGTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCt < 1:3332288/151‑1 (MQ=255) gTCGGTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGc > 2:4270168/1‑151 (MQ=255) gggAACCTGGCGGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGAAACAAAAAAAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTcc < 2:3742031/149‑1 (MQ=255) gTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTcc > 1:1960809/1‑151 (MQ=255) gTGAACCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTcc < 2:3837881/151‑1 (MQ=255) aCCTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTgc < 1:1865565/151‑1 (MQ=255) ccTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTgcg > 1:1773137/1‑151 (MQ=255) ccTGGCAGGCTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTgcg < 2:2134719/151‑1 (MQ=255) cTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTGCGCTATTGCCt < 1:317319/151‑1 (MQ=255) cTTGAAAGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTGCGCTATTGCCt < 1:1388395/151‑1 (MQ=255) aaaGGC‑GGGGGGAAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTGCGCTATTGCCTTTat < 2:477313/151‑1 (MQ=255) aaGGC‑GGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTGCGCTATTGCCTTTatc < 2:3497250/151‑1 (MQ=255) | GCGTGGTCATGACGAGACTTTGAGCGGACAGCCAGGGTACATGTTCAGACGCCAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCGGGGGGGGAGAGCCCTTCAAGCCGGCCAGTGAGTCAAGAATAAGCGCTTGATCCGTCAGGAAAAATAGCTTCTGTCGACATTCACCGTTACGTTTCAGGCAACAGTGCCAAGTGCTGGGTAAGCTTCCCTGCGCTATTGCCTTTATC > CP009974/3127856‑3128150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |