| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 532,826 | (C)6→5 | intergenic (‑284/‑24) | RPPX_02255 ← / → RPPX_02260 | alanyl‑tRNA synthetase/hemolysin‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 532,821 | 0 | C | . | 96.4% | 1086.6 / 24.6 | 220 | intergenic (‑279/‑29) | RPPX_02255/RPPX_02260 | alanyl‑tRNA synthetase/hemolysin‑like protein |
| Reads supporting (aligned to +/- strand): ref base C (4/4); new base . (113/99); total (117/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 | |||||||||||
Only 100 of 232 total aligned reads displayed.
GCCATGAAATCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGCCCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCGGGACGACAAAA > CP009974/532671‑532967 | gCCATGAAATCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTgccgc > 1:1138112/1‑151 (MQ=255) ccATGAAATCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTgccgcc > 2:1423054/1‑151 (MQ=255) tGAAATCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGccccc > 2:3991823/1‑151 (MQ=255) gAAATCGTCATCTCGGGACTCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGccccca < 1:3596851/151‑2 (MQ=255) aaTCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGcccccatt > 1:2956272/1‑148 (MQ=255) aTCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGcccccattc > 2:4920340/1‑147 (MQ=255) aTCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGcccccattc > 1:4388776/1‑147 (MQ=255) tCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGcccccactca > 2:3799362/1‑146 (MQ=255) tCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTca < 1:1765777/151‑1 (MQ=255) aTCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCa < 1:3765604/151‑1 (MQ=255) tctcGGGCATCAAAGTGGTGGCTATACGGTCCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCTCCATTCACAGCaa < 2:524455/151‑1 (MQ=255) tctcGGGCATCAAAGTGGAGGCTATACGGTTCGGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCaa < 2:1206626/151‑1 (MQ=255) tctcGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCaa < 2:2361829/151‑1 (MQ=255) ctcGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGCCCCCCATTCACAGCaa < 2:3598630/151‑1 (MQ=255) ctcGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGCCCCCC‑TTCACAGCaac > 2:506860/1‑150 (MQ=255) cGGGCATCAAAGTGTAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCg < 1:4233230/151‑1 (MQ=255) cGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCg > 1:2748199/1‑151 (MQ=255) gggCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGa > 2:4418052/1‑151 (MQ=255) ggCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGCCCCCCATTCACAGCAAGCGa < 1:590406/151‑1 (MQ=255) gCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGc < 1:5005824/151‑1 (MQ=255) gCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCCAGc > 2:4517957/1‑151 (MQ=255) aGTGGAGGCTATACGGTTCAGCGCCTTGGCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACATCCCTTTAGCTTTCGGCACGGCGACAACTGCCG‑CCCCCATCCACAGCAAGCGAGCCTtctcg < 2:2445556/151‑2 (MQ=255) gTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCAt < 1:3238513/151‑1 (MQ=255) gAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCa > 1:831422/1‑151 (MQ=255) ggCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCAcc > 2:874809/1‑151 (MQ=255) ggCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCAcc < 1:232948/151‑1 (MQ=255) ggCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCAcc < 1:2391031/151‑1 (MQ=255) gCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCAccc > 2:2163504/1‑151 (MQ=255) tataCGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCa < 1:292274/151‑1 (MQ=255) tataCGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCa < 1:2658582/151‑1 (MQ=255) aCGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAAcc > 1:3830382/1‑151 (MQ=255) ggTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAAcccc < 1:3110799/151‑1 (MQ=255) ttCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAAACCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCgc > 2:899704/1‑150 (MQ=255) tCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTc > 1:651904/1‑151 (MQ=255) gcgcCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTat < 1:1189987/151‑1 (MQ=255) ccTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTatttc > 1:468969/1‑151 (MQ=255) cacaACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCt > 2:3955885/1‑151 (MQ=255) cacaACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCt > 1:4410261/1‑151 (MQ=255) acaACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTg > 2:1706094/1‑151 (MQ=255) acaACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTg < 2:2239059/151‑1 (MQ=255) acaACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTg > 1:386786/1‑151 (MQ=255) acaACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTg < 2:311548/151‑1 (MQ=255) cGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAg > 1:3493607/1‑151 (MQ=255) cGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAg < 1:4648166/151‑1 (MQ=255) cGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAg > 1:2478777/1‑151 (MQ=255) cGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATACACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAg < 1:2119628/151‑1 (MQ=255) cccTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCa < 2:1244472/151‑1 (MQ=255) ccTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAg < 2:1974928/151‑1 (MQ=255) cTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGc < 2:3134948/151‑1 (MQ=255) cTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGc > 2:2648139/1‑151 (MQ=255) cTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGc > 1:209199/1‑151 (MQ=255) ttCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCg < 1:3537280/151‑1 (MQ=255) tctcATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCg > 1:1351391/1‑123 (MQ=255) tctcATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCgg > 1:3028514/1‑151 (MQ=255) tctcATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCgg < 2:1075281/151‑1 (MQ=255) cATTCACCTTGTCCCTAGATACGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACACCGTCTATTTCTTTTCTGGCAGGACCAGCGGttt < 2:1301590/151‑1 (MQ=255) tCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACACCCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCa < 2:3541551/151‑1 (MQ=255) cACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCaa > 2:4278825/1‑151 (MQ=255) cACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCaa < 1:1889974/151‑1 (MQ=255) aCCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAAc < 2:3534298/151‑1 (MQ=255) ttGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCATGCGAGCCTTCTCATGCACCCTACCCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGc < 1:2225679/151‑1 (MQ=255) ttGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGc < 1:4525790/151‑1 (MQ=255) tCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCggg > 2:2501837/1‑151 (MQ=255) ccTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCa > 2:2585199/1‑151 (MQ=255) ccTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCa < 1:3395325/151‑1 (MQ=255) ccTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGCGCa > 1:2007765/1‑151 (MQ=255) cTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAg > 1:5238419/1‑151 (MQ=255) tAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCaca > 2:2699028/1‑149 (MQ=255) tAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGa > 1:2016321/1‑151 (MQ=255) tAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGa > 1:988793/1‑151 (MQ=255) aGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGac > 2:3767391/1‑151 (MQ=255) aaGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTGGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCGTTCTCATGCACCCCAACCCCGTCTATTTCATTTCGGGCAGCACCAGCGGTTTTCACCCGCGGACCGACACGt > 2:4107688/1‑151 (MQ=255) aGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTc > 1:513272/1‑151 (MQ=255) tACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCa > 2:2334412/1‑151 (MQ=255) aCCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGCTTTCAACAGCGGGCAGACACGTCCac > 2:328489/1‑150 (MQ=255) ctcctcGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGAt < 1:163661/151‑1 (MQ=255) tcctcGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATg < 1:1175386/151‑1 (MQ=255) tcctcGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATg < 1:369603/151‑1 (MQ=255) tcctcGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATg > 1:1087468/1‑151 (MQ=255) tcGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGcc < 2:5135761/151‑1 (MQ=255) tcGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGcc < 2:481431/151‑1 (MQ=255) cGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCa > 1:1278518/1‑151 (MQ=255) cTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGc < 1:3209415/151‑1 (MQ=255) acaACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGtt > 1:1365719/1‑151 (MQ=255) caACCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTc > 1:2615687/1‑151 (MQ=255) aCCCTTTAGCTTTAGCCACGGCGACAACTGCCG‑CCCCCATCCACAGCAAGCGAGCCTTCTCATGCTCCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCACCACCGGGCTGTCACGTCCCTCCATGGCCAACCCGCTCac > 2:415845/1‑150 (MQ=255) tagctttagcCACGGCGACGACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATGTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTc < 1:3973663/151‑1 (MQ=255) tagctttagcCACGGCGACAACTGCCG‑CCCCCATTCCCCGCAAGCGAGCCTTCTCCTGCACCCCAGCCACGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTc < 2:4646464/151‑1 (MQ=255) agctttagcCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCt > 1:3640189/1‑151 (MQ=255) ctttagcCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTAc > 2:3902205/1‑151 (MQ=255) tttagcCACGGCGCCAACTGCCG‑CCCCCATCCACCGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCTTTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCGTCGTTTCTACg < 2:3498521/151‑1 (MQ=255) agcCACGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAAt < 1:213448/151‑1 (MQ=255) cGGCGACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCgg < 2:4735226/151‑1 (MQ=255) cGACAACTGCCGCCCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCGGga > 1:4850822/1‑151 (MQ=255) gACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCGGgacg > 2:486606/1‑151 (MQ=255) gACAACTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCGGgacg < 2:1887604/151‑1 (MQ=255) aCTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGCCCAGCGGCTTTCAACAGCGGGCAGACACGTCCATCGCTGGCCAAGCCGTTCATCGTTTCTACGAATACCGGGACGACaa > 2:1467508/1‑151 (MQ=255) aCTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCGGGACGACaa < 2:2007701/151‑1 (MQ=255) aCTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCGGGACGACaa > 1:873030/1‑151 (MQ=255) cTGCCG‑CCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCGGGACGACaaa < 2:347316/151‑1 (MQ=255) | GCCATGAAATCGTCATCTCGGGCATCAAAGTGGAGGCTATACGGTTCAGCGCCTTGTCACAACGCCCCCCTTCTCATTCACCTTGTCCCTAGATAAGTACCACTCCTCGCCTGCACAACCCTTTAGCTTTAGCCACGGCGACAACTGCCGCCCCCCATTCACAGCAAGCGAGCCTTCTCATGCACCCCAACCCCGTCTATTTCATTTCTGGCAGGACCAGCGGTTTTCAACAGCGGGCAGACACGTCCATCGATGGCCAAGCCGTTCATCGTTTCTACGAATACCGGGACGACAAAA > CP009974/532671‑532967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |