| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 5,704,352 | (G)12→11 | intergenic (‑292/+172) | RPPX_25370 ← / ← RPPX_25375 | GntR family transcriptional regulator/porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 5,704,341 | 0 | G | . | 92.9% | 147.2 / 10.0 | 56 | intergenic (‑281/+183) | RPPX_25370/RPPX_25375 | GntR family transcriptional regulator/porin |
| Reads supporting (aligned to +/- strand): ref base G (1/3); new base . (40/12); total (41/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.45e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
GGGTGAACCCGCTCCTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGGGGGGCGCGC > CP009974/5704191‑5704491 | gggTGAACCCGCTCCTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACg < 2:1191541/151‑1 (MQ=255) tGAACCCGCTCCTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGGACCCGCCCCCACgggg > 1:2466527/1‑151 (MQ=255) tGAACCCGCTCCTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACgggg < 2:1578737/151‑1 (MQ=255) cccGCTCCTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACgggggggg < 1:3699892/151‑1 (MQ=255) ccGCTCCTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTGGGAGCGGGTTCACCCGCGAAGCAGTCAACGCGGGGCAAGGCCCCGGCGAC‑GCCGGTGTTCGCGGGCGAACCCGCTCCGACgggggcggg > 2:1361921/1‑151 (MQ=14) cTCCTGCGGGGGGGCCCGAAAAAACACCAACCGGGCTCAAGACGGGGGCTGTAAGGGTGGGAGCGGGTTTCCCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACgggggggggggc < 1:3805471/151‑2 (MQ=14) ccTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACgggggggggggcgg > 1:5155270/1‑148 (MQ=255) cTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAT‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACgggggggggggcgcc > 1:1022263/1‑147 (MQ=21) ggggggggGCCAAGAAACCACCCGGGCACAGGACGGGCGCTGTAAGTGTAGGGGGGGGTTTACCCGCGAAGCAGGCACCGCGGGGCAGGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGa < 1:3467792/151‑1 (MQ=11) gggggCGCGCCAAGAACCCAACCTGGCTCAAGGCAGGCGCTGTAAAGGAAGGAGCGGGTTTCCCCGCGAAGCAGGCAACGCGGGGCATGGCCCCGGCTGC‑GCCGGTGTCCGCGGGTGACCCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGa < 1:3590799/151‑1 (MQ=11) ggggCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGGGGGGGGGGGCG‑CAAGaa > 1:4434678/1‑151 (MQ=255) ggCGCGGCAAGAGACCACCCTGGCTCGAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGAAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGCGCCAAGAaacc < 2:4026142/151‑1 (MQ=11) cAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCCCCGGGCAC‑GCCGGTGTTCGCGGGAAAACCCGCCCCTAC‑‑‑GGGGGGGGGCGCGCCAAGAaaacaacccagc > 1:3012382/1‑147 (MQ=11) accaaccTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGCGCCAAAAAACAAACATGGCGCaaa > 1:4303586/1‑150 (MQ=11) ccaaccTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCCCCAAGAAACCAACCGGgcgacag > 1:4026154/1‑147 (MQ=255) caaccTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGGGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGGCAAGAACACCACCCGGCGCAAGa > 2:2040733/1‑151 (MQ=14) cgggttCAAGACATGCGCTGGAAATGTAGGAGCGGGTTTCCCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTA‑GGGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATg < 1:3389715/146‑1 (MQ=14) tCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGCGCCAAGAAAACAACCGGGCGCAAGACATGGGCTgg > 1:3694973/1‑150 (MQ=11) gcaggACATGCGCGGAAAAGGTGGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCGGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTg < 1:290525/147‑1 (MQ=14) aaGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCACCCTGGCGCAAGACATGCGCTGTa > 1:2661556/1‑151 (MQ=255) gACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAACACAACCGGGCGCAAGACATGCGCAGTaaa > 1:5163045/1‑151 (MQ=14) ggcgcGGAAAGTGTAGGGCCGGGTTCACCCGGAGGGGGGGCAAGGCGGGGGATGGCACCGGCTCC‑GCCGGTGTTCGGGGGGGAACCCGCCCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTa < 1:1540321/150‑1 (MQ=9) gcTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCTGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGGGCCAGGAAACCAACCTGCCCCAAGACCTGCGGCGCAAATGTTgggg > 2:671538/1‑149 (MQ=11) tAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCCCCCAGAAACCCACCGGGCCCACCACATGCGCCCTAAAGGTCGGCGCgg > 2:124583/1‑151 (MQ=14) ggggAGGGGGTTCGCCCGCGAGGGAGGCAAGGGGGGGAATGGCACCGGCTGG‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTAc < 1:1706369/149‑1 (MQ=14) cGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTACGAGCGGGTTTACCCGCGaa > 1:4785418/1‑151 (MQ=255) gggggtACCCGCGAGGCAGGCAGGGCGGGGGAGGGCCCGGGCCAC‑GCCGGTGTTCGCGGGGGACCCCGCTCCTA‑GGGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGaa < 2:1498842/146‑1 (MQ=17) gggTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGGGGGGTTACCCGCGaa > 1:4254037/1‑151 (MQ=255) gggTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAAACATGCGCGGTAAATGTAGAAGGGGGTTTAACCGCGaa > 1:183940/1‑151 (MQ=17) gTTTACCGGTGAAGCAGGCAGCGCGGGGGAGGGCCGCGCCTAC‑GCGGGTGTGCGGGGGCGACCCCGCTCCTA‑GGGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGc < 2:4087533/151‑1 (MQ=17) gTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCCCCAAGAAACCAACCTGCCCCAAGACACGCGCTGTACAGGTCGAAGCGGGTTCACCCGCGACGc > 2:3753951/1‑151 (MQ=17) tACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGGAAATGTGGGAGCGGGTTTACCCGCGAAGCAgg > 1:604810/1‑151 (MQ=255) cgcgAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCCACCTGGCGCAAGACATGCGCTGTAAATGTAGGCGCGGGGTTGCCCGGGAAGCAGGccaa > 1:2383917/1‑148 (MQ=17) aaGCGGGCAAGGCGGGGCA‑GGCGCCGGGTCCGGCCGGTGTTGGGGGGTGACCCCCCCCTTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCgg < 1:982553/151‑1 (MQ=14) aGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCCCCGAGAAACCAACCTGGCGCAACACGCGCCCCGTAAATGTAGGAGCGGGTTTACCCCCCGAGCACGCCACGCcgggac > 2:842553/1‑149 (MQ=17) aaCGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGGATGGc > 1:1845308/1‑151 (MQ=255) aaCGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCCCAAGACACGCGCTGTAAATGTCGGAGCGGCTTTACCCCCGCAACGGGCAACGCCGGGCATgcc > 2:2433072/1‑149 (MQ=17) ggggCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCCCCAAGAAACCAACCTGGCCCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACCCGGGGCCTGGCCCCgg > 1:942555/1‑151 (MQ=14) ggggCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGc > 1:1016040/1‑151 (MQ=255) gggCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGGGGGGCATGGCACCGGCt > 2:1082603/1‑151 (MQ=255) aTGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACCTGCGCTGTAACTGTAGGAGCGGGTTGACCCCCCACGCAAGCACCCCGGGGCAGGGCCCCgggccgc > 2:4123564/1‑146 (MQ=14) aTGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTCCCCCCCGAAGCAGGCAACGCGGGGCATGGCACCGGCtttcc > 2:3817349/1‑149 (MQ=14) ggCACCGGCTGC‑GCCAGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGC‑CGCCAAGACACCAAGCTGGCGCAAGACATGCGTTGTAAAAGGAGGAGGGGGTTTCCCCGCGAAGGCGGCAAGGGGGGGGGCGGCGCCGGcgtcggcg > 2:2144452/1‑144 (MQ=2) gCACCGGCTAC‑GCGGGTGTGCGCGGGCGACCCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCg < 1:4930877/151‑1 (MQ=17) cACGGGCTAC‑GCCGTGGTTAGCGGGTGAACCCGCACCTAC‑‑GGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGgt < 1:2144452/151‑1 (MQ=14) ggCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCCCGAAGCAGGCAACGCGGGGGAGGGCCCCGGGTTTGCCgggggt > 1:2490670/1‑147 (MQ=17) cTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACTCGGGGCATGGCACCGGCTTTGCCGGTGTTcg > 1:116305/1‑151 (MQ=255) cTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGCAAATGTAGGAGCGGGTTTCCCCGCGAAGCCGGCAACGCGGGGCATGGCCACGGCCTTGCCggccgtct > 2:3297319/1‑145 (MQ=17) tAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCGGGCGCAAGACATGCGCTGAAAATGTAGGAGCGGGTTCACCCGCGAAACCGGCCACGCGGGGCCCGGCACCGGCTTTGCCCGGGTTcgc > 2:877739/1‑151 (MQ=17) gCCGGTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCCCTAAATGTAGGAGCGGGGTTCCCCCCGACGCACGCAACGCGGGGCTGCGCCCCGGCCTTGCGGCGGTTCCCggg > 2:1518187/1‑151 (MQ=14) ggTGTTCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGGGa > 1:2177491/1‑151 (MQ=255) tCGCGGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGGTGACCCGCGAAGCAGGCCACGCGGGGGATGGCACCGGCGTTGCCGGTGGTCGCGGGGGGAcccc > 2:780332/1‑150 (MQ=14) ngcgGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCCCCCGCTTTGCCGGTGTTCGCGGGTTAACCCGc > 1:422363/2‑151 (MQ=255) gcgGGTGAACCGGCCCCTGC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCt < 1:137421/151‑1 (MQ=255) cgGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGccc > 1:838667/1‑149 (MQ=255) cgGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGGGTTCGCGGGGGAACCCGCTc > 1:4412421/1‑151 (MQ=255) cgGGTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCAGGGCCCCGGCTTTGCCGGGGGTCGCGGGTGAACCCGCTc > 1:127912/1‑151 (MQ=14) ggTGAACCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGTAGAGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGGGAACTCGCTCCt > 1:668006/1‑151 (MQ=14) gTGAACCCGCTCCTAC‑‑GGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTAc > 1:892311/1‑151 (MQ=255) aaCCCGCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACCCGGGGCATGGCCCCGGCTCTGCCGGGGTTCGCGGGGGAACCCGCTCCTACgg > 2:1518582/1‑151 (MQ=14) gcccGCGCCTTC‑GGGGGGGGGGGCGGGGCAAGTAACCAACCGGGCGCAAGATATGCGAGGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACggg < 1:4580561/150‑1 (MQ=14) ccGCTCTTAC‑GGGGGGGGGGGCGCGCAAAGAAACCAACCTGGAGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACggggg < 1:4685173/151‑1 (MQ=255) cGCTCCTAC‑GGGGGGGGGGGCGCCCCAAAAAACCAACCTTGCCCAAGACATCCGCCTTAATTGTCCGAGCGGGTCTCCCCCCGAAGCCCGCACCCCCGGGCATGGCCCCGGCGTTCCCGGTCTGCCCGGGTGGACCGCCCCGTCCgggggg > 2:534295/1‑151 (MQ=255) gCTCCTAC‑GGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGGGTTCGCGGGTGAACCCGCCCCTACggggggg > 1:1859594/1‑151 (MQ=255) ggggggcgggggCGCGCCATGACTTCTGCGTGGAGCAAGACGGGCGCGGTAGATGTAGGCGCTGGTTCACCCGCGGAGCAGGCAGCGCGGGGGATGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGGGGGgcgcgc < 2:4572768/151‑1 (MQ=14) | GGGTGAACCCGCTCCTACGGGGGGGCGCGCCAAGAAACCAACCTGGCTCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTAC‑GCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGGGGGGGGGCGCGCCAAGAAACCAACCTGGCGCAAGACATGCGCTGTAAATGTAGGAGCGGGTTTACCCGCGAAGCAGGCAACGCGGGGCATGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGGGGGGCGCGC > CP009974/5704191‑5704491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |