BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	2,515,527	(G)_8→9	coding (1910/4668 nt)	RPPX_11225 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	2,515,519	1	.	G	96.4%	774.9 / 20.9	220	coding (1902/4668 nt)	RPPX_11225	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (5/3); new base G (111/101); total (116/104)
Fisher's exact test for biased strand distribution p-value = 7.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 236 total aligned reads displayed.

GGTATTGCTCTATCGTCCGCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAT‑‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCGTGACCTTCTG  >  CP009974/2515369‑2515663

ggTATTGCTCTATCGTCCGCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAt                                                                                                                                                      >  1:3267017/1‑151 (MQ=255)

ggTATTGCTCTATCGTCCGCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAt                                                                                                                                                      >  1:1914923/1‑151 (MQ=255)

 gTATTGCTCTATCGTCCGCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAT‑‑g                                                                                                                                                   >  1:2648899/1‑151 (MQ=255)

        tctATCGTCCGCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAT‑‑ggggg‑g‑gg                                                                                                                                          <  1:1086565/151‑1 (MQ=255)

          tATCGTCCGCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAT‑‑ggggg‑g‑gggc                                                                                                                                        >  2:724677/1‑149 (MQ=255)

              gTCCGCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTg                                                                                                                                     >  1:3383522/1‑151 (MQ=255)

                ccGCTGGTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAg                                                                                                                                   <  2:3851257/151‑1 (MQ=255)

                  gCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGGCAGGAGTCTCGACTGGATGGCGCCGGACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGcc                                                                                                                                 >  1:5204978/1‑151 (MQ=255)

                  gCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGcc                                                                                                                                 >  1:4926655/1‑151 (MQ=255)

                  gCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCAAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGcc                                                                                                                                 <  2:1676521/151‑1 (MQ=255)

                    tGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTc                                                                                                                               <  1:14620/151‑1 (MQ=255)

                      ttCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCAt                                                                                                                             >  1:4876114/1‑151 (MQ=255)

                           cACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATaccac                                                                                                                        >  2:1728164/1‑151 (MQ=255)

                              tGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTc                                                                                                                     >  1:74228/1‑151 (MQ=255)

                                 cacGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCAt                                                                                                                  >  2:296216/1‑151 (MQ=255)

                                 cacGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCAt                                                                                                                  <  2:1858136/151‑1 (MQ=255)

                                  acGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATa                                                                                                                 >  2:2802781/1‑151 (MQ=255)

                                  acGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATa                                                                                                                 <  2:2331639/151‑1 (MQ=255)

                                    gCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAgg                                                                                                               >  1:2527680/1‑151 (MQ=255)

                                     cTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCCGTGAGCCTCACCCCACCTCCATAGGa                                                                                                              >  2:2530027/1‑151 (MQ=255)

                                      tACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGaa                                                                                                             >  1:2077650/1‑151 (MQ=255)

                                      tACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAT‑‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAAt                                                                                                            >  1:4853998/1‑151 (MQ=255)

                                       aCGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAAt                                                                                                            <  2:2688978/151‑1 (MQ=255)

                                        cGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATc                                                                                                           <  2:1435173/151‑1 (MQ=255)

                                          tCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGa                                                                                                         >  2:4073097/1‑151 (MQ=255)

                                             aTACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATcc                                                                                                      <  2:177923/151‑1 (MQ=255)

                                               acacCCGACTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATGGGGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATccc                                                                                                     <  2:3210257/151‑1 (MQ=255)

                                                   ccAGCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTatat                                                                                                <  2:629497/151‑1 (MQ=255)

                                                    cATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATatc                                                                                               >  1:4139313/1‑151 (MQ=255)

                                                      tCTGGCGGATTTGCTGGGTCATGTGCGCGAGGCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCCGCGAGGCTCATACCACCGCCATAGGAAGCGATCGCtgtagcct                                                                                             >  2:4147051/1‑147 (MQ=255)

                                                        tGGCTGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATcc                                                                                           <  1:1309650/151‑1 (MQ=255)

                                                         ggCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATccc                                                                                          >  1:46563/1‑151 (MQ=255)

                                                          gCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATcccc                                                                                         <  1:1335316/151‑1 (MQ=255)

                                                          gCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAT‑‑GGGGG‑GTGGCCGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATcccc                                                                                         >  1:1251155/1‑151 (MQ=255)

                                                             gATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAT‑‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGc                                                                                     <  1:4695622/151‑1 (MQ=255)

                                                                ttGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGt                                                                                   >  1:660687/1‑151 (MQ=255)

                                                                  gCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTcc                                                                                 >  1:3591158/1‑151 (MQ=255)

                                                                  gCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTcc                                                                                 <  1:5037845/151‑1 (MQ=255)

                                                                   gtGGGTCTGGGGCGCGAGGCGAGGCGGCGGATGGACAGTAGTCTGGCCTGGATGGCGGCGAACGTCGGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCa                                                                                <  2:4577400/150‑1 (MQ=255)

                                                                   gtGGGTCATGTGCGGGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCa                                                                                <  2:2152303/150‑1 (MQ=255)

                                                                   cTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCa                                                                                >  2:4428442/1‑151 (MQ=255)

                                                                    tGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTGCATAGGAATCGATACCTATATCATCCCCGAGCGTCCAg                                                                               >  2:2963605/1‑151 (MQ=255)

                                                                    tGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAg                                                                               >  1:3960292/1‑151 (MQ=255)

                                                                      gggcATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAgcg                                                                             <  1:733910/148‑1 (MQ=255)

                                                                      ggTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAgcg                                                                             <  1:4320374/151‑1 (MQ=255)

                                                                         cATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGcgccc                                                                          <  1:3211069/151‑1 (MQ=255)

                                                                         cATGTGCGCGAGTCGAAGCGGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGcgccc                                                                          <  2:3161458/151‑1 (MQ=255)

                                                                          aggtgCGCGGGTCTCAGCTGCTGCAGCACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGcgcccg                                                                         <  2:3447389/149‑1 (MQ=255)

                                                                                 cgAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCACtt                                                                  >  2:671519/1‑151 (MQ=255)

                                                                                  gAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATcccc                                                                                         >  2:1934974/1‑127 (MQ=255)

                                                                                     tCGACGCTGCTGCAGGACAGTATACTCGACTGGATGGCGCCGAACGTCGGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTCAGCCCCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCa                                                              <  1:1865210/151‑1 (MQ=255)

                                                                                     acGAAGCTGCTGCAGGACAATATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCa                                                              <  1:1231789/150‑1 (MQ=255)

                                                                                      cGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAg                                                             <  1:2357447/151‑1 (MQ=255)

                                                                                         aGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCa                                                          >  1:1045946/1‑151 (MQ=255)

                                                                                         aGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCa                                                          >  1:375975/1‑151 (MQ=255)

                                                                                             gctgcAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTa                                                      <  2:3579356/151‑1 (MQ=255)

                                                                                              ctgcAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTAc                                                     >  2:3698086/1‑151 (MQ=255)

                                                                                              ctgcAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTAc                                                     <  2:3279331/151‑1 (MQ=255)

                                                                                                gcAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCGTAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTg                                                   >  2:5006668/1‑151 (MQ=255)

                                                                                                   ggACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCCGCGCCCGCCCAATTGGCAGTCACCTACTGGAc                                                >  2:3477082/1‑151 (MQ=255)

                                                                                                    gACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGAcc                                               >  2:811816/1‑151 (MQ=255)

                                                                                                     aCAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCg                                              >  1:3043313/1‑151 (MQ=255)

                                                                                                      cAGTATGCTCGACTGGAGGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCgg                                             <  2:1128063/151‑1 (MQ=255)

                                                                                                       aGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGc                                            >  2:4962446/1‑151 (MQ=255)

                                                                                                        gTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCg                                           >  1:2714128/1‑151 (MQ=255)

                                                                                                         tATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGa                                          <  1:773545/151‑1 (MQ=255)

                                                                                                          tttCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGat                                         <  2:1084513/150‑1 (MQ=255)

                                                                                                          aTTCTCGACTGGATGGCGGCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGat                                         <  1:2843101/151‑1 (MQ=255)

                                                                                                          aTTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGat                                         <  1:2492864/151‑1 (MQ=255)

                                                                                                             ctcGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATAtt                                      <  1:3000007/151‑1 (MQ=255)

                                                                                                               ggACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGa                                    <  1:1652422/150‑1 (MQ=255)

                                                                                                               cGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGa                                    <  1:4958958/151‑1 (MQ=255)

                                                                                                                gACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGAc                                   <  2:3769815/151‑1 (MQ=255)

                                                                                                                 aCTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCCGTGAGCCTCATACCACCCCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCCGCGAACTTGAcc                                  >  2:2852827/1‑150 (MQ=255)

                                                                                                                 aCTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACg                                  <  1:1997709/151‑1 (MQ=255)

                                                                                                                  cTGGATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTTACgg                                 >  1:3161238/1‑150 (MQ=255)

                                                                                                                     gATGGCGCCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGagca                              <  1:2930140/151‑1 (MQ=255)

                                                                                                                         gcgcCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATATGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCTCCCAATTTGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGctc                          >  1:1447225/1‑151 (MQ=255)

                                                                                                                           gcCGAACGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACAGGCGATATTGACGAGCAGCTCTa                        >  2:1364459/1‑151 (MQ=255)

                                                                                                                            ccGAACGTCAGGCCGATATATGAGCATGGGGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTa                        >  1:2318399/1‑151 (MQ=255)

                                                                                                                              gAACGTCAGGCCGATATATGAGCAG‑‑GGGGGTG‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCAGCCCCCAGCGTCCTGCGCCCGCCCAATTGGCAGCCACCTACTGGACCGGCGATATTCGCGAGCAGCTCTGCaa                     >  2:2623275/1‑151 (MQ=255)

                                                                                                                               aaCGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAAt                    <  1:1745906/151‑1 (MQ=255)

                                                                                                                               aaCGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATAATGACGAGCAGCTCTACAAt                    >  2:1232281/1‑151 (MQ=255)

                                                                                                                               aaCGGCAGGCCGATATATGAGCATGGGGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACaa                     <  1:2468384/151‑1 (MQ=255)

                                                                                                                                aCGGCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATg                   <  2:87143/151‑1 (MQ=255)

                                                                                                                                 cGTCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGc                  <  2:2648899/151‑1 (MQ=255)

                                                                                                                                  gTCAGGCCGATATATGAGCATGGGGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGc                  >  1:4342472/1‑151 (MQ=255)

                                                                                                                                   tCAGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGa                >  1:772764/1‑151 (MQ=255)

                                                                                                                                     aGGCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAAc              >  2:4175214/1‑151 (MQ=255)

                                                                                                                                      ggCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAAcc             <  2:5175121/151‑1 (MQ=255)

                                                                                                                                      ggCCGATAGATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAAcc             <  2:1266500/151‑1 (MQ=255)

                                                                                                                                       gCCGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCg            <  1:1493472/151‑1 (MQ=255)

                                                                                                                                        ccGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCGt           >  1:4261139/1‑151 (MQ=255)

                                                                                                                                         cGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCGTg          >  2:4262359/1‑151 (MQ=255)

                                                                                                                                         cGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCGTg          >  1:598820/1‑151 (MQ=255)

                                                                                                                                         cGATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCGTg          >  1:4763720/1‑151 (MQ=255)

                                                                                                                                          gATATATGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACTATCTCCATAGGAATCGATCCCTATATTATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCATTCACCTACTGGACCGGCGATATGGACGAGCCGCTCTACAATGCGAACCGTGa         >  1:982857/1‑151 (MQ=255)

                                                                                                                                              tatGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCGTGACCtt     <  2:4790212/151‑1 (MQ=255)

                                                                                                                                              tatGAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGGCCAGCGCCCGCCCAATTGGCAGTCACCTCCTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGACCCGTTACCtc     >  2:4552699/1‑150 (MQ=255)

                                                                                                                                                 gAGCATG‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCGTGACCTTCTg  >  2:1569381/1‑151 (MQ=255)

GGTATTGCTCTATCGTCCGCTGTTCGCCACTGACACGCTACGTCAATACACCCATCTGGCGGATTTGCTGGGTCATGTGCGCGAGTCGAAGCTGCTGCAGGACAGTATTCTCGACTGGATGGCGCCGAACGTCAGGCCGATATATGAGCAT‑‑GGGGG‑G‑GGCAGTGAGCCTCATACCACCTCCATAGGAATCGATCCCTATATCATCCCCGAGCGTCCAGCGCCCGCCCAATTGGCAGTCACCTACTGGACCGGCGATATTGACGAGCAGCTCTACAATGCGAACCGTGACCTTCTG  >  CP009974/2515369‑2515663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`