| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,082,964 | (G)6→7 | coding (842/888 nt) | RPPX_13710 → | 3‑hydroxyisobutyrate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,082,958 | 1 | . | G | 99.2% | 834.4 / ‑0.3 | 235 | coding (836/888 nt) | RPPX_13710 | 3‑hydroxyisobutyrate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (118/115); total (119/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 266 total aligned reads displayed.
CGGCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGA‑GGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGATTTTTTTCGTC > CP009974/3082808‑3083102 | cGGCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTgcgaggcga < 1:3991607/151‑1 (MQ=255) ggCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTgcgaggcga‑g > 1:3850090/1‑151 (MQ=255) ggCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTgcgaggcga‑g > 1:1283144/1‑151 (MQ=255) ggCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTgcgaggcga‑g > 1:4432171/1‑151 (MQ=255) ggCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCCgcgaggcga‑g > 2:4271159/1‑151 (MQ=255) ggCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCACGAGCCTgcgaggcga‑g > 2:4688108/1‑151 (MQ=255) gCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGcgaggcga‑gg > 2:1656350/1‑151 (MQ=255) cgTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAATTGTACCAAGCCATGACCCCGCGAGGCGA‑gggggggc > 2:3284127/1‑149 (MQ=255) gCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAgg < 2:1059875/151‑1 (MQ=255) tACACCGGTCGCTTTGGCGCCGACCTCATGCTCAAGGCCCTCGGGCTGGCTACCGAGGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGAc < 2:2834680/151‑1 (MQ=255) acacCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGAcc > 2:557442/1‑150 (MQ=255) cacCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACtt > 2:746191/1‑151 (MQ=255) cGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTtctc > 1:4733645/1‑151 (MQ=255) ggTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCg > 1:1779056/1‑151 (MQ=255) gTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCgg > 2:1784779/1‑151 (MQ=255) tGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGc > 1:5188899/1‑151 (MQ=255) gCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCa < 1:373746/151‑1 (MQ=255) tttGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCAtc > 2:923974/1‑151 (MQ=255) tgtGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGGCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCAtc < 2:290008/149‑1 (MQ=255) ggCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCAtcgtc > 1:3656767/1‑151 (MQ=255) ggcggAACGCAGGCTCAGGGACCGCGGGCGGGCGACCGAGGCGGCACGCAAGGCACACCAACCGGTGATTCTCGGTGCGGGGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGa < 1:1840051/147‑1 (MQ=255) ggcGAACTCATGGTCAAGGACCGCGGGCTGGCTGCCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTGGGTGCCGTGGACCAGCAGTTGTGCCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAg < 2:1912042/149‑1 (MQ=255) ccGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCACGAGCCTGCGAGGCGAGGGGGGGCAAGGACTCCTCGGCCACCGTCGAgg > 2:3199238/1‑151 (MQ=255) gAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGt > 2:2332455/1‑151 (MQ=255) gAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGt < 2:824321/151‑1 (MQ=255) gAACGCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGt < 2:3801062/151‑1 (MQ=255) aagtCATGCGCAAGCCCCTCGGGCTGGCTACGGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGtt < 2:4519406/148‑1 (MQ=255) aaCTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGtt < 1:1895506/151‑1 (MQ=255) aCTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCAtc > 2:1168046/1‑140 (MQ=255) cTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTAt < 1:1568984/151‑1 (MQ=255) taTGCTCACGCACCTCGGGCTGGCTACCGAAGCGGGAGGCCAGGAACACAAACCGGTGATTCGCGGTGCGGTGGGCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCg < 2:2580307/150‑1 (MQ=255) aTGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCTGCCATCGTCGAGGGTTAgcgc > 1:1067487/1‑151 (MQ=255) gCTCAGGGGCCTCGGGCTCGCTACCGAGGCGGCACGCCAGGCACACCAACCGGGGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCaa < 2:3435208/151‑1 (MQ=255) aGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAgg > 1:2660629/1‑151 (MQ=255) ggACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGa > 1:3503956/1‑151 (MQ=255) ccTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCCTCGTCGCGGGTTATCGCAAGAAGGAGTg > 2:367908/1‑151 (MQ=255) tCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGAt < 2:2267515/151‑1 (MQ=255) tCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGAt < 2:15874/151‑1 (MQ=255) tCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGAt > 1:965061/1‑151 (MQ=255) gcgggcgggCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGAt < 2:3014040/150‑1 (MQ=255) ggctggctACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAATAAGGAGTGATGCa > 1:5034538/1‑151 (MQ=255) ctggctACCGAAGCGGCACGCCAAGCACACCACCCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAag < 1:112274/151‑1 (MQ=255) tggctACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAaga < 1:4365291/151‑1 (MQ=255) ggctACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAagag > 2:3646036/1‑151 (MQ=255) ctACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGt > 2:2165503/1‑151 (MQ=255) tACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTg > 2:4407315/1‑151 (MQ=255) ccGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGGTATCGCAAGAAGGAGGGATGCAAGAGGTGGa > 2:297514/1‑151 (MQ=255) gAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACt > 1:1172374/1‑151 (MQ=255) gAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACt > 2:5076252/1‑151 (MQ=255) gCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCa < 1:3161950/151‑1 (MQ=255) gCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCa < 1:4571760/151‑1 (MQ=255) ggCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGCGGTGGACTTCCTc < 2:388058/151‑1 (MQ=255) ggCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATc > 1:2186985/1‑151 (MQ=255) ggCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATc > 2:4051694/1‑151 (MQ=255) cACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATcgc > 1:3876296/1‑151 (MQ=255) aCGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCCAGGACCTCCCGGCCCACGTCGAGGGCTATCGCCAGAAAGAGTGGTGCAAGAGGGGGGCTTCaacccc > 2:3136100/1‑146 (MQ=255) aCGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATcgcg < 2:1284557/151‑1 (MQ=255) aCGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGT‑GACTTCATCGCgg > 2:1491368/1‑151 (MQ=255) aGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTATAACAAGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGCGTTATCGCAAGAAGGAGCGATGCAAGCGGTGGACTTCATCTCGCGCCa > 2:4827918/1‑151 (MQ=255) ggCACACCCACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAg < 1:732475/151‑1 (MQ=255) cacCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTgg < 1:54699/151‑1 (MQ=255) cacCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTgg < 1:4966377/151‑1 (MQ=255) ccAGCCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGcc < 2:2693471/151‑1 (MQ=255) aaCCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCtt > 2:4135869/1‑151 (MQ=255) gTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCctc > 1:2728339/1‑151 (MQ=255) gTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCctc < 1:4475139/151‑1 (MQ=255) ctcGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAAc > 1:2180487/1‑151 (MQ=255) cGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTg > 1:2606448/1‑151 (MQ=255) ggTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTgc > 1:4179976/1‑151 (MQ=255) gTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTgcg < 2:431954/151‑1 (MQ=255) ccGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCAc < 2:4432171/151‑1 (MQ=255) gTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGGCTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCa > 1:2981332/1‑151 (MQ=255) gTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGACGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCa > 2:4736302/1‑151 (MQ=255) ggCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCaga > 1:4238470/1‑151 (MQ=255) cccAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGGTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAgg > 2:2013959/1‑151 (MQ=255) ccAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGCGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAggg > 2:138126/1‑151 (MQ=255) cagcagTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGa > 1:4070836/1‑151 (MQ=255) gcagTTGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCAGCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAg > 2:5060054/1‑151 (MQ=255) ttGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGgcg > 1:1470484/1‑151 (MQ=255) tGTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGgcgc < 1:1656350/151‑1 (MQ=255) gTACCAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGcc < 1:3252056/151‑1 (MQ=255) tACCGGGCCATGAGCCCGCGAGGCGAGGGGGGGCAATGACTTCTCGGCCATCGGCGAGGGGTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCt < 2:2622163/151‑1 (MQ=255) cAGGCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCATGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGcc > 2:1803540/1‑150 (MQ=255) ggCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTcc < 1:2536120/151‑1 (MQ=255) ggCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTcc < 2:138428/151‑1 (MQ=255) ggCCATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTcc > 2:4201288/1‑151 (MQ=255) cATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCcgcg > 2:3010687/1‑151 (MQ=255) cATGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCcgcg < 1:3408293/151‑1 (MQ=255) aTGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAgg > 2:208289/1‑100 (MQ=255) aTGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGa > 1:2844748/1‑151 (MQ=255) aTGAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGa > 2:2456412/1‑151 (MQ=255) gAGCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGAtt > 1:222442/1‑151 (MQ=255) ggCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGAttt < 2:271555/150‑1 (MQ=255) gCCTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGAtttt > 1:67267/1‑151 (MQ=255) ccTGGGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGAttttt < 2:1978074/151‑1 (MQ=255) cTGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGAtttttt < 1:3320709/151‑1 (MQ=255) tGCGAGGCGAGGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGAttttttt < 1:3429667/151‑1 (MQ=255) gcgaggcgagGGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGATTTTTTTc > 1:2043545/1‑151 (MQ=255) gaggcgaggGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCAGCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCGCCGCGATCTTTTTCGt > 2:255441/1‑151 (MQ=255) aggcgaggGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGATTTTTTTCGTc < 1:2914927/151‑1 (MQ=255) | CGGCATCGCGTGGCTACACCGGTGGCTTTGGCGCCGAACTCATGCTCAAGGACCTCGGGCTGGCTACCGAAGCGGCACGCCAGGCACACCAACCGGTGATTCTCGGTGCCGTGGCCCAGCAGTTGTACCAGGCCATGAGCCTGCGAGGCGA‑GGGGGGCAAGGACTTCTCGGCCATCGTCGAGGGTTATCGCAAGAAGGAGTGATGCAAGAGGTGGACTTCATCGCGGGCCAGGTGGCCTTCCCTCTGTAACTGCGCACCAGAGGGAAGGGCGCCTGCTCCGCGATTTTTTTCGTC > CP009974/3082808‑3083102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |