| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,288,402 | (G)6→7 | coding (139/633 nt) | RPPX_14650 → | TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,288,396 | 1 | . | G | 95.2% | 865.7 / 37.6 | 251 | coding (133/633 nt) | RPPX_14650 | TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (9/3); new base G (125/114); total (134/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 271 total aligned reads displayed.
AGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑GGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATGCGCAAGCTGCT > CP009974/3288246‑3288541 | aGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGAcg‑c < 1:625449/151‑1 (MQ=255) tGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑ggg > 2:4193257/1‑151 (MQ=255) tGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑ggg < 1:978026/151‑1 (MQ=255) ggTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCAAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCACGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑gggg‑gg < 2:227170/151‑1 (MQ=255) ttGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑gggg‑gggc < 1:541214/151‑3 (MQ=255) tGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑gggg‑gggcg > 2:4327161/1‑148 (MQ=255) gTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑gggg‑gggcga < 2:920471/151‑5 (MQ=255) aCTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATc < 2:2941816/151‑1 (MQ=255) cTGCCCTGGTCCGTCGAACCCAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCAGCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCt < 1:120585/151‑1 (MQ=255) ccATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACt > 2:2870223/1‑151 (MQ=255) tGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGc < 1:3399940/151‑1 (MQ=255) ggTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCa > 1:1733370/1‑151 (MQ=255) ggTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCa < 2:1765933/151‑1 (MQ=255) gTCAGTCGAACCAGAGAAGAAGCCCAGGAAACCCGTGGCCAGATCATCGAGGCGGCGGAGAGGGCCTTCTACAAGCGCGGGGGTGCGCGACCCCCCCTGGCCGACAGCGCCGACCTGGCGGGTGTGCCGAG‑GGGG‑GG‑CGTTATACTGGGAc > 2:3375584/1‑151 (MQ=255) cGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTc < 2:2107465/151‑1 (MQ=255) cGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTc > 1:2773303/1‑151 (MQ=255) cGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGGGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTc > 2:2763288/1‑151 (MQ=255) tCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTcaa > 2:1059680/1‑151 (MQ=255) tCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTcaa > 1:3741538/1‑151 (MQ=255) gAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTcaaca < 1:4264129/151‑1 (MQ=255) aaCCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTcaacaa > 2:263203/1‑151 (MQ=255) aaCCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTCGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑GGGGCGG‑CGATCTACTGGCACTTcaacaa > 2:5185088/1‑151 (MQ=255) aaaGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGACAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTTACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAg > 1:3959075/1‑151 (MQ=255) aaaGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAg > 1:4066042/1‑151 (MQ=255) aaaGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGCGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAg > 2:702666/1‑151 (MQ=255) aagaagaagCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAgg < 2:1343345/151‑1 (MQ=255) agaagaagCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGCCATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGc > 2:4747355/1‑151 (MQ=255) agaagCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGa < 1:1272140/151‑1 (MQ=255) gCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTg < 1:1019543/151‑1 (MQ=255) cccAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTgg < 1:3673323/151‑1 (MQ=255) cccAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTgg > 1:1661891/1‑151 (MQ=255) ccAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGt > 1:4537067/1‑151 (MQ=255) cAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTg > 2:4470459/1‑151 (MQ=255) ggAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCa > 2:3791574/1‑151 (MQ=255) aaCCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGc > 1:1073193/1‑151 (MQ=255) cccGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCCCTTCAACAACAAGGCCGCGCTGGTGCAGGCGt > 2:2077537/1‑151 (MQ=255) ccGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑AGATCTACTGGCACTTCAACAACAAGGCCGCGCTGGTGCAGGCGtt > 2:4042615/1‑151 (MQ=255) cGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTg > 1:4868273/1‑151 (MQ=255) gTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGc > 2:1840672/1‑151 (MQ=255) cAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGAc > 1:1451802/1‑151 (MQ=255) aGATCATCGAGGCGGCGGACAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACa < 1:2388870/151‑1 (MQ=255) tcGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGc < 1:3342402/151‑1 (MQ=255) gAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCAc > 1:4704675/1‑151 (MQ=255) gAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCAc > 2:1431392/1‑151 (MQ=255) gAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCAc > 2:2203727/1‑151 (MQ=255) aGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACg > 2:4845463/1‑151 (MQ=255) ggcggcGGAAAGGGCCTTCTACGAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑GGGG‑GGCCGATCTACTGGCATCTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACga > 2:5014006/1‑151 (MQ=255) cggcggAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACgaga > 1:3602234/1‑151 (MQ=255) cggcggAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGAAG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACgaga < 1:1496007/151‑1 (MQ=255) gcggAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGAcc > 1:1567138/1‑151 (MQ=255) gAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCAt < 2:4898310/151‑1 (MQ=255) gAAAGGGCCTTCTACAAGCGCGGGGTGGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCAt < 1:1870108/151‑1 (MQ=255) aaaGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATg > 2:1307891/1‑151 (MQ=255) aaGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGa < 1:2292895/151‑1 (MQ=255) gggCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑GGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCa < 1:3011781/151‑1 (MQ=255) ccTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACga < 1:4436585/137‑1 (MQ=255) ttCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTg > 2:1161546/1‑151 (MQ=255) ttCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTg > 1:4644097/1‑151 (MQ=255) tCTACAAGCGCGGGGTTGCGCGAGCCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCAAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTgg < 1:2062627/151‑1 (MQ=255) tCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTgg > 1:3078610/1‑151 (MQ=255) gcgcGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGgcgcgcgc < 1:2508707/151‑1 (MQ=255) cgGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCgcgag < 1:285758/151‑1 (MQ=255) ggggTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCgcgagc < 1:3703131/151‑1 (MQ=255) ggggTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCgcgagc > 2:3630114/1‑151 (MQ=255) ggggTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCgcgagc > 1:1435074/1‑151 (MQ=255) gggTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTCCTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCCCGCCAGCCTGCACGAGACCCATGACCACTTGgcgcgcgcgcgcc > 2:1981792/1‑150 (MQ=255) gggTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCgcgagcg < 2:4509069/151‑1 (MQ=255) ggTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCgcgagcga < 1:4832051/151‑1 (MQ=255) ggTTGCGCGAACCACCCTGGCCGACACCGCCGAACTGGCGGGGGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCgcgagcga < 2:4731997/151‑1 (MQ=255) tGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAg < 1:4228112/151‑1 (MQ=255) tGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAg > 2:1517767/1‑151 (MQ=255) gcgcGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGc > 2:1341132/1‑151 (MQ=255) gAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAgg < 1:4802829/151‑1 (MQ=255) accaccCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGAt < 1:1135303/151‑1 (MQ=255) caccCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGa > 1:5177699/1‑151 (MQ=255) ccTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACt < 1:348470/151‑1 (MQ=255) ccTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACt < 2:1369729/151‑1 (MQ=255) gggCCGACATCGCCGGACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCg < 2:798838/150‑1 (MQ=255) ccGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGAcc > 2:1587415/1‑151 (MQ=255) cGACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACGACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGAccc > 2:851857/1‑151 (MQ=255) gACATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCg > 1:3478841/1‑151 (MQ=255) cATCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCt > 1:3616792/1‑151 (MQ=255) aTCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCtt > 2:2282126/1‑151 (MQ=255) tCGCCGGACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTg < 2:2534677/151‑1 (MQ=255) tCGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCGACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTg < 2:1252499/151‑1 (MQ=255) cGCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTgg > 1:208331/1‑151 (MQ=255) gCCGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGc < 2:2707942/151‑1 (MQ=255) ccGAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCt < 1:1748083/151‑1 (MQ=255) gAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGCTGAACTCGACCCGCTTGGCTGc > 2:3020391/1‑151 (MQ=255) gAACTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCCACCCGCTTGGCTGc > 2:3130321/1‑151 (MQ=255) aaCTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCa < 2:3931642/151‑1 (MQ=255) aaCTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCa < 1:3356728/151‑1 (MQ=255) aCTGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCAt < 1:2356876/151‑1 (MQ=255) gtGGCGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCGCTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATg < 2:5166885/150‑1 (MQ=255) cGGGTGTGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATGCGCa < 2:3947314/151‑1 (MQ=255) gtgtGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATGCGCAAgc > 1:2167112/1‑151 (MQ=255) gtgtGACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATGCGCAAgc > 1:3926707/1‑151 (MQ=255) tgtgACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATGCGCAAgct > 1:717746/1‑151 (MQ=255) gtgACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATGCGCAAgctg > 2:4587362/1‑151 (MQ=255) gACG‑CGGGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATGCGCAAgctgct > 2:1936716/1‑151 (MQ=255) | AGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGGCGGGTGTGACG‑C‑GGGG‑GG‑CGATCTACTGGCACTTCAACAACAAGGCCGAGCTGGTGCAGGCGTTGCTCGACAGTCTGCACGAGACCCATGACCATTTGGCGCGCGCGAGCGAAAGCGAGGATGAACTCGACCCGCTTGGCTGCATGCGCAAGCTGCT > CP009974/3288246‑3288541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |