BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	4,697,192	(G)_5→6	coding (283/1977 nt)	RPPX_20915 →	cytochrome D1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	4,697,187	1	.	G	96.4%	883.0 / 23.2	253	coding (278/1977 nt)	RPPX_20915	cytochrome D1
Reads supporting (aligned to +/- strand): ref base . (4/5); new base G (102/141); total (107/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 271 total aligned reads displayed.

AGGCCTTGCACCGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CC‑GGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTACTTCTTGCTGATGCTGAACAA  >  CP009974/4697037‑4697334

aGGCCTTGCACCGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGcc‑cc                                                                                                                                                      <  2:1300406/151‑1 (MQ=255)

aGGCCTTGCACCGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGcc‑cc                                                                                                                                                      <  2:356359/151‑1 (MQ=255)

    cTTGCACCGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CC‑gggg                                                                                                                                                 <  2:1058704/151‑1 (MQ=255)

    cTTGCACCGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CC‑g                                                                                                                                                    >  1:2121882/1‑148 (MQ=255)

      tGCACCGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CC‑gggggg                                                                                                                                               >  1:2289115/1‑150 (MQ=255)

          ccGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CC‑ggggggcgtg                                                                                                                                           <  1:2023587/151‑6 (MQ=255)

           cGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTgg                                                                                                                                           <  1:3916444/151‑1 (MQ=255)

              gtCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATc                                                                                                                                        <  2:3779792/150‑1 (MQ=255)

                 ggCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGAc                                                                                                                                     <  1:1615247/150‑1 (MQ=255)

                      ggACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGc                                                                                                                                <  1:2249150/151‑1 (MQ=255)

                      ggACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGc                                                                                                                                >  2:1820607/1‑151 (MQ=255)

                      ggACGGCGTGACCGTGGAGTGCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGc                                                                                                                                <  2:4194875/151‑1 (MQ=255)

                        aCGGCGTGACCGTGGAGTTCGAGTCCAGGCAATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGcac                                                                                                                              <  1:418756/151‑1 (MQ=255)

                         gggagTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGcaca                                                                                                                             <  2:1509246/147‑1 (MQ=255)

                           gCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGt                                                                                                                           <  1:3068361/151‑1 (MQ=255)

                             gTGCCCGTGGACTTCGAGTCCCGGCCATTGGTCCGTGGCTTGTTGACGGTGGGCGGTTTCGTCAATATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCTCAGTCg                                                                                                                         <  2:2723786/151‑1 (MQ=255)

                             gTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCg                                                                                                                         <  1:3497421/151‑1 (MQ=255)

                             gTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCg                                                                                                                         <  2:2688574/151‑1 (MQ=255)

                              tGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCgg                                                                                                                        <  1:3265923/151‑1 (MQ=255)

                               gACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGc                                                                                                                       <  1:4297329/151‑1 (MQ=255)

                                 ccGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGccc                                                                                                                     >  2:1234968/1‑151 (MQ=255)

                                   gTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCg                                                                                                                   <  2:5734/151‑1 (MQ=255)

                                        gTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATAGAGCCGGCACAGTGGGCCCCGGCAgg                                                                                                              >  2:2738103/1‑151 (MQ=255)

                                          tCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAgggg                                                                                                            <  1:2530472/151‑1 (MQ=255)

                                            gAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGAc                                                                                                          <  1:3330065/151‑1 (MQ=255)

                                              ggCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACcg                                                                                                        <  2:1890139/151‑1 (MQ=255)

                                               gCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCAGGGCC‑CCGGGGGGCGGGGATCGACCCGGCACAGTCGGCCCAGCCAGGGGACcgc                                                                                                       >  2:4086683/1‑151 (MQ=255)

                                                cccGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCATCGACCAGACCAGTGGCCACCCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCCGCACAGTCGGCCCCGGCAGGGGACcgcg                                                                                                      <  1:5052766/151‑1 (MQ=255)

                                                   ggCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGc                                                                                                   <  1:1412097/151‑1 (MQ=255)

                                                     ccATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGCGCag                                                                                                 >  1:898759/1‑151 (MQ=255)

                                                        ttGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGGATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGc                                                                                              <  2:4538645/151‑1 (MQ=255)

                                                        ttGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGc                                                                                              >  1:1175819/1‑151 (MQ=255)

                                                        ttGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGc                                                                                              >  1:1874711/1‑151 (MQ=255)

                                                         tGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCt                                                                                             >  2:1982500/1‑151 (MQ=255)

                                                          ggCCTGCGGCGAGTTGACGGCGGGCGGCTTCGCCAACGTTCTTTTCTTGCTCAGCGAGCTGACCAGCGGGCTCCCGCCGTCGTCCATGCCCGAC‑GCTGGCGCGATGCGACCCGGCCCAGTCGGTCCCGGCAGGGGACCGCGAGCAGAGCTg                                                                                            <  2:1570041/151‑1 (MQ=255)

                                                          ggCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGCCCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTg                                                                                            <  1:1793325/151‑1 (MQ=255)

                                                           gCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGc                                                                                           <  2:2212787/151‑1 (MQ=255)

                                                            ccGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCa                                                                                          <  1:260122/151‑1 (MQ=255)

                                                            ccGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCa                                                                                          <  1:780952/151‑1 (MQ=255)

                                                              ggcggcGAGCTGAAGGAGGGCGGCTGCGCCAACCTCCGCTTGAAGCTCAGCGACCAGACCAGTGGCCACCCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAg                                                                                        <  2:4793791/151‑1 (MQ=255)

                                                               gcggcgAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAgg                                                                                       <  1:4712535/151‑1 (MQ=255)

                                                               gcggcgAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAgg                                                                                       <  1:2673948/151‑1 (MQ=255)

                                                                 ggcgAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGgcg                                                                                     <  1:4842761/151‑1 (MQ=255)

                                                                 ggcgAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CC‑GGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGgcgc                                                                                    >  2:3646403/1‑151 (MQ=255)

                                                                 ggcgAGCGGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGTCCAGACCAGTGGCCACCCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGgcg                                                                                     <  2:2393402/151‑1 (MQ=255)

                                                                   cgATCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCTGGGGGCGTGGATCGACCCGTCACAGTCGGCCCCGGCATGGGACCGCGCGCAGAGCTGCAAGGcccg                                                                                   >  2:1744191/1‑151 (MQ=255)

                                                                    gAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCgg                                                                                  >  1:2407924/1‑151 (MQ=255)

                                                                     aGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCggg                                                                                 >  1:1237206/1‑151 (MQ=255)

                                                                     aGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCggg                                                                                 >  2:1382401/1‑151 (MQ=255)

                                                                        ggAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCGGTGGCCAACCGGTGGCGGGCATGGCC‑CCGGGGGGCGTGGGTCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTgg                                                                              <  2:2184100/150‑1 (MQ=255)

                                                                          aaGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGgcg                                                                            >  1:1436539/1‑151 (MQ=255)

                                                                            ggaggGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCt                                                                          <  2:1650933/151‑1 (MQ=255)

                                                                             gaggGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCACGGCGCGGGTGGCGCTg                                                                         >  2:3890555/1‑151 (MQ=255)

                                                                             gaggGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTg                                                                         >  1:4893214/1‑151 (MQ=255)

                                                                              aggGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGt                                                                        <  1:1982500/151‑1 (MQ=255)

                                                                                ggcggcTTCGCCAACAGCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGttt                                                                      <  2:4265513/151‑1 (MQ=255)

                                                                                 gcggcTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTtc                                                                     <  1:1699116/151‑1 (MQ=255)

                                                                                   ggcTTCGCCAACATCCTCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTtctc                                                                   <  1:5112078/151‑1 (MQ=255)

                                                                                      ttCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAag                                                                <  1:4118153/151‑1 (MQ=255)

                                                                                      ttCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAag                                                                >  2:946553/1‑151 (MQ=255)

                                                                                       tCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAaga                                                               >  1:399377/1‑151 (MQ=255)

                                                                                          ccAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGagca                                                            >  1:1406103/1‑151 (MQ=255)

                                                                                          ccAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGagca                                                            <  2:2121079/151‑1 (MQ=255)

                                                                                           cAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGagcag                                                           <  1:3808466/151‑1 (MQ=255)

                                                                                           cAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGagcag                                                           >  1:2732671/1‑151 (MQ=255)

                                                                                               aTCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATc                                                       <  2:3702058/151‑1 (MQ=255)

                                                                                                tCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCg                                                      >  1:3384041/1‑151 (MQ=255)

                                                                                                   gCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCgggg                                                   <  2:3279915/151‑1 (MQ=255)

                                                                                                    cTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGc                                                  <  1:5223071/151‑1 (MQ=255)

                                                                                                      tCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGccc                                                >  2:2542652/1‑151 (MQ=255)

                                                                                                       cAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCg                                               <  2:1574134/151‑1 (MQ=255)

                                                                                                        aaGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCCAGAGCAGCATCGGGGCCCgg                                              >  2:822361/1‑151 (MQ=255)

                                                                                                         aGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGc                                             <  2:451079/151‑1 (MQ=255)

                                                                                                         aGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGc                                             <  1:4594560/151‑1 (MQ=255)

                                                                                                          gCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGcc                                            <  1:2318624/151‑1 (MQ=255)

                                                                                                          gCTCAGAGACCAGGCCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGcc                                            <  2:3054443/151‑1 (MQ=255)

                                                                                                            tCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCgc                                          <  1:1115086/151‑1 (MQ=255)

                                                                                                             cAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCgct                                         <  1:347866/151‑1 (MQ=255)

                                                                                                             cAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCgct                                         >  1:728974/1‑151 (MQ=255)

                                                                                                             cAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCCGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAACAGCAGCATCGGGGCccgcccgcc                                         >  2:2801985/1‑150 (MQ=255)

                                                                                                              aGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCgctg                                        <  1:4433009/151‑1 (MQ=255)

                                                                                                                cGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCgctgct                                      >  1:1738312/1‑151 (MQ=255)

                                                                                                                 gaccagaccaGTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTc                                     <  1:4937768/151‑1 (MQ=255)

                                                                                                                    ccggcgagTGGCCAACCGCGGTCGGGCATGGCC‑CAGGGGGGCGTGGAGCGACGCGGCACGGTCGGCCACGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGAc                                  <  2:1097607/145‑1 (MQ=255)

                                                                                                                      gaccagTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCt                                >  1:2820466/1‑151 (MQ=255)

                                                                                                                        ccagTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGa                              >  2:1996990/1‑151 (MQ=255)

                                                                                                                         cagTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGaa                             <  1:354837/151‑1 (MQ=255)

                                                                                                                          agTGGCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAAc                            >  2:2444276/1‑151 (MQ=255)

                                                                                                                              gCCAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCt                        <  2:4368078/151‑1 (MQ=255)

                                                                                                                               ccAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGCGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTa                       <  1:1485310/151‑1 (MQ=255)

                                                                                                                                cAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAgggac                      >  1:977221/1‑147 (MQ=255)

                                                                                                                                cAACCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTAc                      >  2:2080569/1‑151 (MQ=255)

                                                                                                                                  aCCGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTActt                    >  2:4750873/1‑151 (MQ=255)

                                                                                                                                   ccGCGGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTActtc                   <  2:4130429/151‑1 (MQ=255)

                                                                                                                                    cGCTGTCGGGCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTActtct                  >  1:1565285/1‑151 (MQ=255)

                                                                                                                                      ctggggggCATGGCCGAG‑GGGGGGGTGGGTCGACGCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTACTTCTtg                <  2:4956033/146‑1 (MQ=255)

                                                                                                                                            ggCATGGCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTACTTCTtgctgatg          <  2:3424963/151‑1 (MQ=255)

                                                                                                                                               aTGGAC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTACTTCTtgctgatgctg       >  2:605420/1‑151 (MQ=255)

                                                                                                                                                 ggCC‑CCGGGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTACTTCTTGCTGATGCTGaa     <  2:337353/151‑1 (MQ=255)

                                                                                                                                                   cc‑cg‑GGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTACTTCTTGCTGATGCTGAACaa  >  1:2085721/1‑151 (MQ=255)

AGGCCTTGCACCGGCTCAGCCGGGACGGCGTGACCGTGGAGTTCGAGGCCCGGCCATTGGCCGGCGGCGAGCTGAAGGAGGGCGGCTTCGCCAACATCCGCTTCAAGCTCAGCGACCAGACCAGTGGCCAACCGCTGTCGGGCATGGCC‑CC‑GGGGGCGTGGATCGACCCGGCACAGTCGGCCCCGGCAGGGGACCGCGAGCAGAGCTGCAAGGCGCGGGTGGCGCTGTTTCTCAAGAGCAGCATCGGGGCCCGGCCGCTGCTCGACCTGAACAGCTACTTCTTGCTGATGCTGAACAA  >  CP009974/4697037‑4697334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`