BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	5,031,155	(C)_8→9	coding (721/822 nt)	RPPX_22315 ←	DNA repair protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	5,031,147	1	.	C	95.0%	684.3 / 29.0	198	coding (729/822 nt)	RPPX_22315	DNA repair protein
Reads supporting (aligned to +/- strand): ref base . (7/3); new base C (93/95); total (100/98)
Fisher's exact test for biased strand distribution p-value = 3.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 216 total aligned reads displayed.

GGTGACTACCTGGCTGGGTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTACCAGGCGCTTGG  >  CP009974/5030997‑5031292

        ccTGGCTGGGGTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑c‑c‑cccccc                                                                                                                                            <  1:456329/151‑1 (MQ=255)

          tggctggGTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑c‑c‑ccccccct                                                                                                                                          <  1:12376/151‑3 (MQ=255)

          tggctggGTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑c‑c‑ccccccct                                                                                                                                          <  1:2365100/151‑3 (MQ=255)

          tggctggGTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCAACCAGGCTGCGCTTGAGCAGTTCGGCCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑c‑c‑cccccccc                                                                                                                                          >  2:1757535/1‑149 (MQ=255)

          gtgctggGTTGCCGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTTTTCACCGGTTTCTTGCCACCCGGGCTGCGCTGGAGCAGTTCGGTCAGGTCGAGGATGTCCGCTCCTTGCTCG‑‑c‑c‑ccccccct                                                                                                                                          <  2:3434463/149‑3 (MQ=255)

            gctggGTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑c‑c‑ccccccctgc                                                                                                                                        <  2:5153726/151‑5 (MQ=255)

            gctggGTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑c‑c‑ccccccctgc                                                                                                                                        <  1:3100275/151‑5 (MQ=255)

             ttggGTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCTTTTGGCGTTTTCTTCACCGGTTTTTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑c‑c‑ccccccctgcg                                                                                                                                       <  2:5236045/150‑6 (MQ=255)

               gggTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTc                                                                                                                                     <  1:4231446/151‑1 (MQ=255)

               gggTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTc                                                                                                                                     >  1:550377/1‑151 (MQ=255)

                  gtGCAGGCGCAGTGTTGAACTTGATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGcc                                                                                                                                  <  2:4704305/150‑1 (MQ=255)

                   ggcgggCGCAGGGTGGACCTTAGTGGATTTGGCCGGGTTCATGAGGCCTTTCGCGTTTTCTTCACCGGTTTCTGGCCCCCCAGGCTGCGCTGGAGCGGTTGGGTCAGGCCGAGGATGTCCGCCCCTTTCCCGC‑C‑C‑CCCCCC‑TGCGTCGccc                                                                                                                                 <  2:3710039/147‑1 (MQ=255)

                    gCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCt                                                                                                                                <  2:3023904/151‑1 (MQ=255)

                         cgcAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTcc                                                                                                                           <  2:2261814/151‑1 (MQ=255)

                         cgcAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTcc                                                                                                                           <  2:2397211/151‑1 (MQ=255)

                         cgcAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCCCCCTTcccc                                                                                                                           >  1:1184826/1‑151 (MQ=255)

                          gcAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACTCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCa                                                                                                                          >  1:871270/1‑151 (MQ=255)

                           cAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCAc                                                                                                                         >  1:4689429/1‑151 (MQ=255)

                            aGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCAcc                                                                                                                        >  2:3511600/1‑151 (MQ=255)

                              tCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCAcccc                                                                                                                      >  2:245386/1‑149 (MQ=255)

                                 tGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTc                                                                                                                   >  1:2637569/1‑151 (MQ=255)

                                 tGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTc                                                                                                                   <  2:4454457/151‑1 (MQ=255)

                                   aaCTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGa                                                                                                                 <  1:2125421/151‑1 (MQ=255)

                                   aaCTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGa                                                                                                                 >  1:5118442/1‑151 (MQ=255)

                                    aCTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGAt                                                                                                                <  2:788687/151‑1 (MQ=255)

                                    aCTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGAt                                                                                                                >  2:1101890/1‑151 (MQ=255)

                                     cTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCCATc                                                                                                               >  1:3351169/1‑151 (MQ=255)

                                     cTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCCCGATc                                                                                                               >  2:1774134/1‑151 (MQ=255)

                                       tAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCtt                                                                                                             <  2:835194/151‑1 (MQ=255)

                                         aTGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGCCC‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTg                                                                                                            <  1:2254583/151‑1 (MQ=255)

                                              aTTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGCTCTTGCCCTTg                                                                                                      >  1:722835/1‑151 (MQ=255)

                                                   ccGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGc                                                                                                 >  2:3586034/1‑151 (MQ=255)

                                                   ccGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCCCGATCTTGCCCTTGCTGGc                                                                                                 >  2:1571401/1‑151 (MQ=255)

                                                     gtgtTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCt                                                                                               <  1:1414001/151‑1 (MQ=255)

                                                      tgtgCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCCGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCtt                                                                                              <  2:3731283/151‑1 (MQ=255)

                                                         tCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTCCTGGCCTtctc                                                                                           >  1:5027788/1‑151 (MQ=255)

                                                          cATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTctcc                                                                                          <  2:1889378/151‑1 (MQ=255)

                                                           aTGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCAcc                                                                                                                        <  1:1102661/120‑1 (MQ=255)

                                                           aTGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTctcct                                                                                         <  1:3231953/151‑1 (MQ=255)

                                                             gAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTctcctct                                                                                       >  1:994407/1‑150 (MQ=255)

                                                             gAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCtcctcc                                                                                       >  2:1613866/1‑151 (MQ=255)

                                                             gAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCtcctcc                                                                                       >  2:1113395/1‑151 (MQ=255)

                                                              aaGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTcca                                                                                      <  1:1033296/151‑1 (MQ=255)

                                                              aaGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTcca                                                                                      >  1:3708900/1‑151 (MQ=255)

                                                               aGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTccac                                                                                     <  1:1988001/151‑1 (MQ=255)

                                                               aGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTccac                                                                                     <  1:4017322/151‑1 (MQ=255)

                                                               aGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTCCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTccac                                                                                     >  1:4176255/1‑151 (MQ=255)

                                                                gCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTccacc                                                                                    >  1:494283/1‑151 (MQ=255)

                                                                  cTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAg                                                                                  <  1:4000106/151‑1 (MQ=255)

                                                                     tCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTc                                                                               <  1:3055426/151‑1 (MQ=255)

                                                                         gTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATg                                                                           <  1:4419728/151‑1 (MQ=255)

                                                                         gTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑CTC‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGCCCTTCTCCTCCACCAGGTCCATg                                                                           >  1:2223627/1‑151 (MQ=255)

                                                                          ttttCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATgt                                                                          >  1:1384358/1‑150 (MQ=255)

                                                                          ttttCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGa                                                                          >  2:3883296/1‑151 (MQ=255)

                                                                           tttCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGAt                                                                         <  2:3990285/151‑1 (MQ=255)

                                                                           tttCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGAt                                                                         <  1:3883523/151‑1 (MQ=255)

                                                                            ttcttcACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATc                                                                        >  1:2480642/1‑151 (MQ=255)

                                                                               ttcACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTc                                                                     >  1:2726226/1‑151 (MQ=255)

                                                                               ttcACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCCCCACCGCCTCGCTCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGACCGTc                                                                     >  2:1308484/1‑151 (MQ=255)

                                                                               ttcACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑C‑CGCCCCCC‑TGCCTCGCCCTTCCCCACCGCCTCGATCTTTCCCCTGCTGGCCCTCTCCTCCACCAAGTCCCTGACCGTc                                                                     >  2:4883795/1‑151 (MQ=255)

                                                                                   ccGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGc                                                                 <  2:258605/151‑1 (MQ=255)

                                                                                        ttCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAg                                                            <  1:4484841/151‑1 (MQ=255)

                                                                                           ttGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCg                                                         <  2:1153774/151‑1 (MQ=255)

                                                                                             gCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTc                                                       >  1:1618422/1‑151 (MQ=255)

                                                                                              ccACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCGACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCCTGATCGTCTCGCGGACGGCGTcc                                                      >  2:3127012/1‑150 (MQ=255)

                                                                                                aCCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCCGGCGGCAGGCGTCATg                                                    >  2:4414122/1‑151 (MQ=255)

                                                                                                  ccAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGAt                                                  <  2:1633494/151‑1 (MQ=255)

                                                                                                  ccAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGAt                                                  >  1:3984886/1‑151 (MQ=255)

                                                                                                  ccAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTCCTGGCCTTCTCCTCCCCCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGAt                                                  >  2:3271178/1‑151 (MQ=255)

                                                                                                   cAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATa                                                 <  1:2184867/151‑1 (MQ=255)

                                                                                                    gggCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATaa                                                <  2:3809713/150‑1 (MQ=255)

                                                                                                      gCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATc                                              <  2:264473/151‑1 (MQ=255)

                                                                                                       cTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCCTGATAATcc                                             >  2:811937/1‑151 (MQ=255)

                                                                                                        tGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCt                                            <  2:2132559/151‑1 (MQ=255)

                                                                                                         gcgcTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑CGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCCGGGCCATCGTCGTCTGGCGGAAGGCGGCATGATAATACta                                           >  1:3030383/1‑150 (MQ=255)

                                                                                                              tGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCt                                      <  2:2347002/151‑1 (MQ=255)

                                                                                                               gAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCtt                                     <  2:4225775/151‑1 (MQ=255)

                                                                                                                      tCGGTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGc                              <  1:486480/151‑1 (MQ=255)

                                                                                                                        ggTCAGGTCGAGGATGTCCGCACCTTTCTCGCCC‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCCTGCTCGTCTCGCGGGAGGCGTCATGATAATCCTCTGGCTTCCCGGGcc                             >  1:3197565/1‑151 (MQ=255)

                                                                                                                         gTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCg                           <  2:3914094/151‑1 (MQ=255)

                                                                                                                         gTCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCCCAGGCTTCCAGGGcccc                           >  2:4675447/1‑150 (MQ=255)

                                                                                                                          tCAGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGc                          <  2:1423985/151‑1 (MQ=255)

                                                                                                                            aGGTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCCGGTCCATGATCCTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTCCCAGGGCCCGCTc                        >  2:4832191/1‑151 (MQ=255)

                                                                                                                             ggTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCa                       <  2:1497928/151‑1 (MQ=255)

                                                                                                                             ggTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCa                       <  2:4071871/151‑1 (MQ=255)

                                                                                                                              gTCGAGGATGTCCGCACCTTTGTCGC‑C‑C‑CCCCCC‑GGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCAt                      <  2:5074268/151‑1 (MQ=255)

                                                                                                                              gTCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCAt                      <  1:1111007/151‑1 (MQ=255)

                                                                                                                               tCGAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATg                     <  1:1325869/151‑1 (MQ=255)

                                                                                                                                 gAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTc                   <  1:3493246/151‑1 (MQ=255)

                                                                                                                                 gAGGATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCACGATAATCCTCCGCCTTCCAGGGCCCGCTCATGTc                   >  2:4382626/1‑151 (MQ=255)

                                                                                                                                   ggATGTCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCACGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATTTccc                 >  2:69579/1‑150 (MQ=255)

                                                                                                                                       gTCCGCACCTTTCTCGCCC‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCCCCTGTCctctc              >  2:2042567/1‑150 (MQ=255)

                                                                                                                                        tCCGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTAcc            >  1:111778/1‑151 (MQ=255)

                                                                                                                                         ccGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTAccc           >  1:1504203/1‑150 (MQ=255)

                                                                                                                                         ccGCACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTACCa           <  1:3896127/151‑1 (MQ=255)

                                                                                                                                            cACCTTTCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTACCAGgc        <  1:1799244/151‑1 (MQ=255)

                                                                                                                                            cACCTGTCTCG‑‑C‑C‑CCCCCCGTGCGTGGCCCTTCTCCGCCGCGTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTACCAGgc        <  2:4973892/151‑1 (MQ=255)

                                                                                                                                                tttCTCGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTACCAGGCGCtt    <  1:3633979/151‑1 (MQ=255)

                                                                                                                                                  tctcGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTACCAGGCGCTTgg  <  1:788516/151‑1 (MQ=255)

                                                                                                                                                  tctcGC‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTACTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTACCAGGCGCTTgg  <  1:789269/151‑1 (MQ=255)

GGTGACTACCTGGCTGGGTTGCAGGCGCAGTCTTGAACTTAATGGCATTGGCCGTGTTCATGAAGCCTTTCGCGTTTTCTTCACCGGTTTCTTGCCACCCAGGCTGCGCTTGAGCAGTTCGGTCAGGTCGAGGATGTCCGCACCTTTCTCG‑‑C‑C‑CCCCCC‑TGCGTCGCCCTTCTCCACCGCCTCGATCTTGCCCTTGCTGGCCTTCTCCTCCACCAGGTCCATGATCGTCTGGCGGAAGGCGTCATGATAATCCTCAGGCTTCCAGGGCCCGCTCATGTCCTCTACCAGGCGCTTGG  >  CP009974/5030997‑5031292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`