BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	4,425,765	Δ2,602 bp		RPPX_19815–RPPX_19820	RPPX_19815, RPPX_19820

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	4425765–4428362	4428366	5–2602	276 [1]	[0] 272	RPPX_19815–RPPX_19820	RPPX_19815,RPPX_19820

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 4425764	1 (0.000)	260 (1.030)	158/288	0.2	99.8%	intergenic (+687/‑204)	RPPX_19805/RPPX_19815	hypothetical protein/integrase
*	?	CP009974	4428367 =	0 (0.000)	260 (1.030)	158/288	0.2	99.8%	intergenic (+112/+608)	RPPX_19820/RPPX_19830	ATPase AAA/ligand‑gated channel protein

Only 100 of 276 total aligned reads displayed.

AAGGTGTTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC  >  CP009974/4425614‑4425914

  ggTGTTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGCGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcg                                                                                                                                                      <  2:4232299‑M1/151‑3 (MQ=255)

   gtgtTCAGCCTGGTTCAGGCCATTGTCCATTCGGGGGAAGCCAATTGGGAGCGGCTGGGGCATGAGCCTTCGAGCCAGCCGTTCAACTCGTTGGTGCAGCGGGAGTTCGAGCGCGGGCGGCCGCGTACTCCATCCATACATGCgtgggcgt                                                                                                                                                     >  2:5031031/1‑148 (MQ=255)

    tgtgCAGCCTGGTTCGGGCCCTTGGCCATTCGGGGGAGGCCATTGGGGAGCGGCCGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAAGCCGTTCATCAATGCGGGGGcgtt                                                                                                                                                    <  2:3084891‑M1/151‑5 (MQ=255)

    tgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGTAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgtt                                                                                                                                                    >  1:1387172‑M1/1‑147 (MQ=255)

    tgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgtt                                                                                                                                                    >  1:3708008‑M1/1‑147 (MQ=255)

      ttCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttgg                                                                                                                                                  >  1:1310885‑M1/1‑145 (MQ=255)

      ttCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCGTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCCTTCATCAATGCGGGGGcgctgg                                                                                                                                                  <  2:3018081‑M1/151‑7 (MQ=255)

       tCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggt                                                                                                                                                 >  1:4632528‑M1/1‑144 (MQ=255)

       tCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggt                                                                                                                                                 <  2:2191744‑M1/151‑8 (MQ=255)

         aGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtga                                                                                                                                               <  1:4571447‑M1/151‑10 (MQ=255)

              ggTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgc                                                                                                                                          >  2:3707060‑M1/1‑137 (MQ=255)

              ggTTCAGGCCATGGGACATTCGGGGGAAGCCATTTGGGGGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGGAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgc                                                                                                                                          <  2:642329‑M1/151‑15 (MQ=255)

               gTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCTGCCGCGTAATCCACCCATCAACGCGGGCGcgtaggtgccctgca                                                                                                                                         >  2:5114127‑M1/1‑136 (MQ=255)

                 tcgggccgttggccagtcggGGGACGCCATGTGGGAGCGGCTGGGTCATGAGCCTTCGGGGCAGCCGTTCAACTCGTGGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgat                                                                                                                                       <  2:4027306‑M1/148‑18 (MQ=255)

                     gccattggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatca                                                                                                                                   >  2:1739975‑M1/1‑130 (MQ=255)

                      gggttggccatgcggGGGAAGCCATTGGGGGGCGGGGGGGGCATGAGCCTTCGGGGCAGCCGTTCAACGCGTTGGTGCAGCTGGAGTGCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgtgggtgatctgcgatatcaa                                                                                                                                  <  2:3528990‑M1/148‑23 (MQ=255)

                        attggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatc                                                                                                                                >  2:1325929‑M1/1‑127 (MQ=255)

                        attggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatc                                                                                                                                <  1:3267433‑M1/151‑25 (MQ=255)

                        attggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatc                                                                                                                                <  1:1015616‑M1/151‑25 (MQ=255)

                               attCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGGGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcg                                                                                                                         <  2:5075330‑M1/151‑32 (MQ=255)

                               attCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcg                                                                                                                         >  1:3894008‑M1/1‑120 (MQ=255)

                               attCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcg                                                                                                                         >  2:116135‑M1/1‑120 (MQ=255)

                               attCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcg                                                                                                                         <  1:3314931‑M1/151‑32 (MQ=255)

                                   gggggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttc                                                                                                                     >  2:2818370‑M1/1‑116 (MQ=255)

                                   gggggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttc                                                                                                                     <  2:564801‑M1/151‑36 (MQ=255)

                                   gggggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttc                                                                                                                     <  2:1467462‑M1/151‑36 (MQ=255)

                                       gAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcgg                                                                                                                 >  1:1489574‑M1/1‑112 (MQ=255)

                                            cATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggccccc                                                                                                            <  1:1917018‑M1/151‑45 (MQ=255)

                                            cATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggccccc                                                                                                            >  1:4830232‑M1/1‑107 (MQ=255)

                                            cATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCGGGAGTGCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggccccc                                                                                                            <  2:4985617‑M1/151‑45 (MQ=255)

                                             aTTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggccccca                                                                                                           >  2:4659381‑M1/1‑106 (MQ=255)

                                              tttGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccac                                                                                                          <  2:336575‑M1/151‑47 (MQ=255)

                                              tttGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccac                                                                                                          <  1:3437589‑M1/151‑47 (MQ=255)

                                               ttGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacg                                                                                                         >  2:1281215‑M1/1‑104 (MQ=255)

                                                tGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgt                                                                                                        >  2:2086981‑M1/1‑103 (MQ=255)

                                                  ggAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttg                                                                                                      <  1:3646469‑M1/151‑51 (MQ=255)

                                                  ggAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttg                                                                                                      >  2:4925763‑M1/1‑101 (MQ=255)

                                                      cGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgg                                                                                                  >  2:1843023‑M1/1‑97 (MQ=255)

                                                        gCTGGGGGATGAGCGTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatg                                                                                                <  2:4851029‑M1/151‑57 (MQ=255)

                                                          tGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcg                                                                                              >  2:406489‑M1/1‑93 (MQ=255)

                                                            gggCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcg                                                                                            <  1:4293372‑M1/151‑61 (MQ=255)

                                                              gCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgct                                                                                          >  1:4205367‑M1/1‑89 (MQ=255)

                                                              gCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgat                                                                                          >  1:1020545‑M1/1‑89 (MQ=255)

                                                               cATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgatt                                                                                         <  1:729383‑M1/151‑64 (MQ=255)

                                                               cATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgatt                                                                                         >  2:3629436‑M1/1‑88 (MQ=255)

                                                                aTGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattt                                                                                        >  2:4617471‑M1/1‑87 (MQ=255)

                                                                 tGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgacgcgcgatttt                                                                                       >  2:2420135‑M1/1‑86 (MQ=255)

                                                                    gCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtc                                                                                    <  1:3517544‑M1/151‑69 (MQ=255)

                                                                      gttcGGGGCAGCCGGTGAAGTCGTTGGTGCGGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCGATGCGGGGGagttggtggtctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccg                                                                                  <  2:4512678‑M1/150‑71 (MQ=255)

                                                                      cTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccg                                                                                  <  1:3205076‑M1/151‑71 (MQ=255)

                                                                          ggggCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtcgggcgg                                                                              >  2:4164468‑M1/1‑77 (MQ=255)

                                                                           gggCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggc                                                                             <  1:1136912‑M1/151‑76 (MQ=255)

                                                                            ggCAGCCGTGCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggct                                                                            <  2:4244488‑M1/151‑77 (MQ=255)

                                                                              cAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggcttt                                                                          >  1:4517630‑M1/1‑73 (MQ=255)

                                                                                  cGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcagg                                                                      >  2:1954370‑M1/1‑69 (MQ=255)

                                                                                  cGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcagg                                                                      >  2:3471786‑M1/1‑69 (MQ=255)

                                                                                   gTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggc                                                                     >  2:3828022‑M1/1‑68 (MQ=255)

                                                                                       aaCTCGTTGGTGCAGCTGGAGTGCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacc                                                                 <  2:1095591‑M1/151‑88 (MQ=255)

                                                                                        aCTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaaccc                                                                <  2:4693771‑M1/151‑89 (MQ=255)

                                                                                         cTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccc                                                               >  1:3057432‑M1/1‑62 (MQ=255)

                                                                                          tCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaaccccc                                                              >  2:4786971‑M1/1‑61 (MQ=255)

                                                                                            gTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccac                                                            >  1:291278‑M1/1‑59 (MQ=255)

                                                                                                gTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatct                                                        <  1:1348983‑M1/151‑97 (MQ=255)

                                                                                                gTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatct                                                        <  1:1098813‑M1/151‑97 (MQ=255)

                                                                                                       tGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaa                                                 >  1:5156867‑M1/1‑48 (MQ=255)

                                                                                                       tGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaa                                                 <  2:291278‑M1/151‑104 (MQ=255)

                                                                                                          aGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatac                                              <  1:3979317‑M1/151‑107 (MQ=255)

                                                                                                             tCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccg                                           <  1:2301647‑M1/151‑110 (MQ=255)

                                                                                                               gAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccggg                                         >  2:1802078‑M1/1‑40 (MQ=255)

                                                                                                                 gcgcGGGCGGCCGCGTACTCCATTCGTCAATGCGGGGGcgttggtgatctgcgatatcactcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtc                                       <  2:728111‑M1/151‑114 (MQ=255)

                                                                                                                 gcgcGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtc                                       >  2:3120970‑M1/1‑38 (MQ=255)

                                                                                                                  cgcgGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcg                                      >  2:3251191‑M1/1‑37 (MQ=255)

                                                                                                                  cgcgGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcg                                      <  1:247922‑M1/151‑115 (MQ=255)

                                                                                                                    cgggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgct                                    >  1:2520864‑M1/1‑35 (MQ=255)

                                                                                                                     gggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctg                                   <  2:5200108‑M1/151‑118 (MQ=255)

                                                                                                                     gggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctg                                   >  2:2142862‑M1/1‑34 (MQ=255)

                                                                                                                        cggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgatt                                <  1:1765416‑M1/151‑121 (MQ=255)

                                                                                                                         ggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattc                               >  1:1249026‑M1/1‑30 (MQ=255)

                                                                                                                             gcgTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaataaccgggtcgatgattcggaa                           >  1:3131829‑M1/1‑26 (MQ=255)

                                                                                                                                tAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatat                        >  1:2857775‑M1/1‑23 (MQ=255)

                                                                                                                                  ctcCATTCATCAATGCGGGGGcgttggtgatatgcgatatcagtcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaaccccaacatctcgatcaatacccgggtcgctgattcggaatatca                      <  2:612339‑M1/150‑131 (MQ=255)

                                                                                                                                    ccATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagt                    <  1:2620966‑M1/151‑133 (MQ=255)

                                                                                                                                    ccATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagt                    <  2:1019150‑M1/151‑133 (MQ=255)

                                                                                                                                     cATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagtt                   <  1:1627504‑M1/151‑134 (MQ=255)

                                                                                                                                     cATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagct                   >  2:3939446‑M1/1‑18 (MQ=255)

                                                                                                                                        tcatcaATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccg                <  2:4569088‑M1/151‑137 (MQ=255)

                                                                                                                                        tcatcaATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccg                <  1:170226‑M1/151‑137 (MQ=255)

                                                                                                                                        tcatcaATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccg                >  1:4497018‑M1/1‑15 (MQ=255)

                                                                                                                                         cttcgatgcggGGGcgttggtgatctgcgatatcaatcagtcgggcgtcgcggcccccacgttgtcgatgcgcgattttgtccggccgctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgc               <  1:5114127‑M1/146‑138 (MQ=255)

                                                                                                                                           tcaATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgc             >  1:2726867‑M1/1‑12 (MQ=255)

                                                                                                                                            cgatgCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcg            <  1:2214345‑M1/149‑141 (MQ=255)

                                                                                                                                            caATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgctgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcg            <  2:743072‑M1/151‑141 (MQ=255)

                                                                                                                                            caATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcg            <  1:2076338‑M1/151‑141 (MQ=255)

                                                                                                                                             aaTGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgc           >  1:4864‑M1/1‑10 (MQ=255)

                                                                                                                                               tGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgc         >  2:3905401‑M1/1‑8 (MQ=255)

                                                                                                                                                  gggggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaac      >  1:4704916‑M1/1‑5 (MQ=255)

                                                                                                                                                  gggggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaac      >  1:603984‑M1/1‑5 (MQ=255)

                                                                                                                                                  gggggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatcccgatcaatacccgggtcgctgattcggaatatcagttccgcccgcgcaac      >  2:837938‑M1/1‑5 (MQ=255)

                                                                                                                                                    gggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaacgc    >  1:4543993‑M1/1‑3 (MQ=255)

                                                                                                                                                      gcgttggtgatctgcgatatccatcggtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaacgctg  <  2:2691167‑M1/151‑151 (MQ=255)

AAGGTGTTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC  >  CP009974/4425614‑4425914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`