Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 1,658,613 Δ1,195 bp RPPX_07425 RPPX_07425

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 1658613–1659806 1659807 2–1195 243 [0] [0] 244 RPPX_07425 RPPX_07425

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 16586120 (0.000)238 (0.940) 156/290 0.3 100% intergenic (‑17/‑64) RPPX_07420/RPPX_07425 acyl‑CoA dehydrogenase/transposase
?CP009974 1659808 = 0 (0.000)intergenic (+152/+271) RPPX_07425/RPPX_07430 transposase/pyrroloquinoline quinone biosynthesis protein PqqE

Only 100 of 244 total aligned reads displayed.

CGGCGAATAGCCGCTACGGGGTACGCGTAGCGGCTAAAAACCCTACATAAGACGACGATCTGAGCGCTTTTTGATCGATGGATCGCTTCAAAAAACAGCGAGGTCTGTAGTCGGCCAGAAATACGTGGCTACTTCAGACCATCCCTAGGTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGCCATGGCACAAACCCTTG  >  CP009974/1659659‑1659958
                                                                                                                                                     |                                                                                                                                                      
ttcaaggatcgcgtcgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTg                                                                                                                                                       <  1:2697315‑M2/2‑1 (MQ=255)
 tcaaggatcgcgtcgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagcgcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGa                                                                                                                                                      <  2:2871363‑M2/3‑1 (MQ=255)
   aaggatcgcgtcgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGt                                                                                                                                                    <  1:4100460‑M2/5‑1 (MQ=255)
    aggatcgcgtcgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGtt                                                                                                                                                   >  2:4518442‑M2/146‑151 (MQ=255)
       atcgcgtcgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCtg                                                                                                                                                >  1:4024254‑M2/143‑151 (MQ=255)
       atcgcgtcgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaaccactaggTGAGTTCtg                                                                                                                                                >  2:4198805‑M2/143‑151 (MQ=255)
           cgtcgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTggg                                                                                                                                            <  1:5156427‑M2/13‑1 (MQ=255)
           cgtcgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTggg                                                                                                                                            >  2:1570715‑M2/139‑151 (MQ=255)
              cgaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctataggTGAGTCCTGTGGGGTg                                                                                                                                         >  1:3745136‑M2/136‑151 (MQ=255)
               gaccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGa                                                                                                                                        <  2:1281344‑M2/17‑1 (MQ=255)
                accatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGAc                                                                                                                                       >  1:791748‑M2/134‑151 (MQ=255)
                accatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGAc                                                                                                                                       >  1:4614564‑M2/134‑151 (MQ=255)
                accatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGAc                                                                                                                                       <  1:2120445‑M2/18‑1 (MQ=255)
                 ccatgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGAcc                                                                                                                                      >  2:871756‑M2/133‑151 (MQ=255)
                   atgtcgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCcg                                                                                                                                    <  1:3321414‑M2/21‑1 (MQ=255)
                       cgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCt                                                                                                                                <  2:1817211‑M2/25‑1 (MQ=255)
                       cgggcgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCt                                                                                                                                >  2:366433‑M2/127‑151 (MQ=255)
                           cgtggcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctagtTGAGTTCTGTGGGGTGACCCGCGCTTGGc                                                                                                                            >  1:4525854‑M2/123‑151 (MQ=255)
                               gcgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGaa                                                                                                                        <  1:538387‑M2/33‑1 (MQ=255)
                                cgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtcgtcaggcattgcgatgaacctctaggTGAGCTCTGCGGGGTGACCCGCGCTTGGCGGAAg                                                                                                                       >  2:5206516‑M2/118‑151 (MQ=255)
                                cgtcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAg                                                                                                                       <  2:647540‑M2/34‑1 (MQ=255)
                                  tcctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGcc                                                                                                                     <  1:561864‑M2/36‑1 (MQ=255)
                                    ctggcagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGa                                                                                                                   >  2:3039497‑M2/114‑151 (MQ=255)
                                        cagcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCaa                                                                                                               <  1:2624296‑M2/42‑1 (MQ=255)
                                         agcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCaaa                                                                                                              <  2:4479842‑M2/43‑1 (MQ=255)
                                         agcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCaaa                                                                                                              <  2:4847234‑M2/43‑1 (MQ=255)
                                          gcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAAc                                                                                                             <  2:344326‑M2/44‑1 (MQ=255)
                                          gcccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAAc                                                                                                             <  2:877946‑M2/44‑1 (MQ=255)
                                           cccggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACa                                                                                                            >  1:3537312‑M2/107‑151 (MQ=255)
                                              ggcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAgtt                                                                                                         >  1:2728212‑M2/104‑151 (MQ=255)
                                               gcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAgttg                                                                                                        <  2:2169722‑M2/49‑1 (MQ=255)
                                               gcaggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAgttg                                                                                                        >  1:1494244‑M2/103‑151 (MQ=255)
                                                caggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAgttgt                                                                                                       <  1:216075‑M2/50‑1 (MQ=255)
                                                caggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAgttgt                                                                                                       >  2:561592‑M2/102‑151 (MQ=255)
                                                caggctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAgttgt                                                                                                       <  1:3026331‑M2/50‑1 (MQ=255)
                                                    ctctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGa                                                                                                   <  1:1232343‑M2/54‑1 (MQ=255)
                                                    ctcggagagggcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGa                                                                                                   <  2:4286777‑M2/54‑1 (MQ=255)
                                                    agctgatagtgcgcatcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGa                                                                                                   <  2:1314271‑M2/54‑1 (MQ=255)
                                                      ctgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGaaa                                                                                                 <  1:3814652‑M2/56‑1 (MQ=255)
                                                       tgatagtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAAc                                                                                                >  1:3259034‑M2/95‑151 (MQ=255)
                                                       ggatagtgcgcgtcatagcgaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAAc                                                                                                <  2:1158783‑M2/57‑1 (MQ=255)
                                                           agtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTAc                                                                                            <  2:485619‑M2/61‑1 (MQ=255)
                                                           agtgcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTAc                                                                                            <  2:4816953‑M2/61‑1 (MQ=255)
                                                              gcgcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGtt                                                                                         <  2:791748‑M2/64‑1 (MQ=255)
                                                                gcctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTa                                                                                       <  2:1459874‑M2/66‑1 (MQ=255)
                                                                 cctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAg                                                                                      >  1:3099068‑M2/85‑151 (MQ=255)
                                                                  ctcatagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGc                                                                                     >  2:3004274‑M2/84‑151 (MQ=255)
                                                                     atagccaagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCa                                                                                  <  1:2818817‑M2/71‑1 (MQ=255)
                                                                           aagcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTc                                                                            >  2:1590207‑M2/75‑151 (MQ=255)
                                                                             gcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTg                                                                          >  1:186107‑M2/73‑151 (MQ=255)
                                                                             gcagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTg                                                                          <  2:3941905‑M2/79‑1 (MQ=255)
                                                                              cagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGt                                                                         <  1:4390734‑M2/80‑1 (MQ=255)
                                                                              cagctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGt                                                                         <  2:2077820‑M2/80‑1 (MQ=255)
                                                                               agctcgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTc                                                                        >  2:2732360‑M2/71‑151 (MQ=255)
                                                                                   cgtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAgg                                                                    <  1:2825015‑M2/85‑1 (MQ=255)
                                                                                    gtcgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGa                                                                   >  1:1141475‑M2/66‑151 (MQ=255)
                                                                                      ggggaacgaagcggatgtcaggcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATg                                                                 <  2:2524243‑M2/88‑1 (MQ=255)
                                                                                      cgcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATg                                                                 <  2:3154771‑M2/88‑1 (MQ=255)
                                                                                       gcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATgg                                                                <  1:107628‑M2/89‑1 (MQ=255)
                                                                                       gcgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATgg                                                                >  2:5100586‑M2/63‑151 (MQ=255)
                                                                                        cgaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGa                                                               <  2:3211773‑M2/90‑1 (MQ=255)
                                                                                         gaacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGAc                                                              >  2:3512983‑M2/61‑151 (MQ=255)
                                                                                          aacgaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACt                                                             <  1:652922‑M2/92‑1 (MQ=255)
                                                                                             gaagcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATg                                                          >  2:3399922‑M2/57‑151 (MQ=255)
                                                                                               agcggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGt                                                        <  1:4504443‑M2/97‑1 (MQ=255)
                                                                                                 cggatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGc                                                      >  1:1279392‑M2/53‑151 (MQ=255)
                                                                                                   gatatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCa                                                    <  1:4165544‑M2/101‑1 (MQ=255)
                                                                                                    atatcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCAt                                                   >  2:1994208‑M2/50‑151 (MQ=255)
                                                                                                       tcgcgcgaggggggtgtgtagtcaggcattgcgatgagcctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTa                                                <  2:4741239‑M2/105‑1 (MQ=255)
                                                                                                       tcacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTa                                                >  1:3478363‑M2/47‑151 (MQ=255)
                                                                                                        cacgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTAc                                               <  2:3986437‑M2/106‑1 (MQ=255)
                                                                                                         acgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACg                                              <  1:4260942‑M2/107‑1 (MQ=255)
                                                                                                          cgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGc                                             >  1:4529275‑M2/44‑151 (MQ=255)
                                                                                                          cgcaagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGc                                             <  1:2908128‑M2/108‑1 (MQ=255)
                                                                                                             aagggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCAc                                          >  2:3600636‑M2/41‑151 (MQ=255)
                                                                                                              agggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACg                                         >  2:2094659‑M2/40‑151 (MQ=255)
                                                                                                               gggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGa                                        <  1:5094597‑M2/113‑1 (MQ=255)
                                                                                                               gggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGa                                        >  1:198342‑M2/39‑151 (MQ=255)
                                                                                                                ggggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGaa                                       <  2:1889105‑M2/114‑1 (MQ=255)
                                                                                                                 gggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGaaa                                      <  2:1058905‑M2/115‑1 (MQ=255)
                                                                                                                 gggctttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGaaa                                      >  1:3832507‑M2/37‑151 (MQ=255)
                                                                                                                     tttgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATg                                  <  2:3197557‑M2/119‑1 (MQ=255)
                                                                                                                       tgtagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGc                                >  2:4386530‑M2/31‑151 (MQ=255)
                                                                                                                         tagtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACACGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCaa                              <  2:5066102‑M2/123‑1 (MQ=255)
                                                                                                                          agtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCaaa                             <  1:1385369‑M2/124‑1 (MQ=255)
                                                                                                                          agtcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCaaa                             <  1:1692361‑M2/124‑1 (MQ=255)
                                                                                                                            tcaggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCAGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGACACGAAAAATGGCAAATc                           <  2:694913‑M2/126‑1 (MQ=255)
                                                                                                                             caggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCa                          <  1:1835718‑M2/127‑1 (MQ=255)
                                                                                                                             caggcattgcgatgaacctctaggTGAGTTCTGGGGGGTGGCCCGCCCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCGTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCa                          <  2:3735998‑M2/127‑1 (MQ=255)
                                                                                                                               ggcattgcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGt                        >  2:1996018‑M2/23‑151 (MQ=255)
                                                                                                                                 cattgcgatgaacctctagaTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCGCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCa                      <  1:4757097‑M2/131‑1 (MQ=255)
                                                                                                                                  attgcgatgagcctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCAt                     <  2:336879‑M2/132‑1 (MQ=255)
                                                                                                                                     gcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGcc                  <  1:2353683‑M2/135‑1 (MQ=255)
                                                                                                                                     gcgatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGcc                  <  2:3129476‑M2/135‑1 (MQ=255)
                                                                                                                                       gatgaacctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGCCAt                >  2:2324170‑M2/15‑151 (MQ=255)
                                                                                                                                            acctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGCCATGGcac           <  2:2072162‑M2/142‑1 (MQ=255)
                                                                                                                                            acctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGCCATGGcac           >  1:4326014‑M2/10‑151 (MQ=255)
                                                                                                                                             cctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGCCATGGcaca          >  1:982612‑M2/9‑151 (MQ=255)
                                                                                                                                              ctctaggTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGCCATGGCACaa         <  2:4326389‑M2/144‑1 (MQ=255)
                                                                                                                                                    gTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGCCATGGCACAAACCCtt   <  2:4087449‑M2/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CGGCGAATAGCCGCTACGGGGTACGCGTAGCGGCTAAAAACCCTACATAAGACGACGATCTGAGCGCTTTTTGATCGATGGATCGCTTCAAAAAACAGCGAGGTCTGTAGTCGGCCAGAAATACGTGGCTACTTCAGACCATCCCTAGGTGAGTTCTGTGGGGTGACCCGCGCTTGGCGGAAGCCGATCAAACAGTTGTTTGAAACTTACGTTTAGCTCAGCTTTCTGTCAAGGATGGACTATGGTGCCATTTACGCCACGAAAAATGGCAAATCAGTCATGCCATGGCACAAACCCTTG  >  CP009974/1659659‑1659958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑