| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 2,747,118 | Δ2,603 bp | [RPPX_12205]–[RPPX_12220] | [RPPX_12205], RPPX_12210, RPPX_12215, [RPPX_12220] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 2747118–2749713 | 2749720 | 8–2603 | 290 [0] | [1] 290 | [RPPX_12205]–[RPPX_12220] | [RPPX_12205],RPPX_12210,RPPX_12215,[RPPX_12220] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 2747117 | 0 (0.000) | 268 (1.080) | 158/284 | 0.1 | 100% | coding (76/867 nt) | RPPX_12205 | LysR family transcriptional regulator |
| ? | CP009974 | 2749721 = | 0 (0.000) | coding (99/216 nt) | RPPX_12220 | hypothetical protein | |||||
Only 100 of 290 total aligned reads displayed.
CGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCAGCATAGCTCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTATTTGATCTAT > CP009974/2749573‑2749871 | tgagagccaccgcgcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCac > 1:3856195‑M2/149‑151 (MQ=255)tgagagccaccgcgcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCac < 1:1810845‑M2/3‑1 (MQ=255)tgagagccaccgcgcgctctatatcactaagcgacgaacggaagcatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCac > 1:3942855‑M2/149‑151 (MQ=255) gagagccaccgcgcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCacg > 1:1335125‑M2/148‑151 (MQ=255) agagccaccgcgcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCacgg > 1:4667482‑M2/147‑151 (MQ=255) gagccaccgcgcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCacgga < 2:3134809‑M2/6‑1 (MQ=255) gagccaccgcgcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCacgga < 2:4078437‑M2/6‑1 (MQ=255) ccaccgcgcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCacggacgg < 2:2463748‑M2/9‑1 (MQ=255) caccgcgcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGc > 1:373247‑M2/142‑151 (MQ=255) gcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaccccccccccgtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTa > 1:1482446‑M2/136‑151 (MQ=255) gcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTa > 2:4896100‑M2/136‑151 (MQ=255) gcgctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTa < 2:1435810‑M2/16‑1 (MQ=255) cgctctatatcacaaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTaa < 1:1158582‑M2/17‑1 (MQ=255) gctctatatcactaagcgacgaacggaaggatccgtatagctgtgaatctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACTGACGGCTGTGTAAc > 2:2447194‑M2/134‑151 (MQ=255) ctctatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACg < 1:1783029‑M2/19‑1 (MQ=255) tatatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTgg < 2:4117027‑M2/22‑1 (MQ=255) atatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGga > 2:4268357‑M2/129‑151 (MQ=255) atatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGga < 2:4680484‑M2/23‑1 (MQ=255) tatcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGgag < 2:5072549‑M2/24‑1 (MQ=255) atcactaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGgaga < 1:4991521‑M2/25‑1 (MQ=255) actaagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGc > 1:637774‑M2/124‑151 (MQ=255) ctaggcgacgaacggaaggatgcgtggagctgtgaagctagaacggtaggctgcattccgccgcgcgagcgcgtgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCt < 2:4008830‑M2/29‑1 (MQ=255) taagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTc > 2:3876146‑M2/122‑151 (MQ=255) aagcgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTcc > 1:3202650‑M2/121‑151 (MQ=255) cgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTccgcc < 1:2433713‑M2/34‑1 (MQ=255) cgacgaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTccgcc > 1:680361‑M2/118‑151 (MQ=255) gaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGccc > 1:401514‑M2/114‑151 (MQ=255) gaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGccc > 1:1013770‑M2/114‑151 (MQ=255) gaacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGccc > 2:3179596‑M2/114‑151 (MQ=255) aacggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGcccc > 1:474960‑M2/113‑151 (MQ=255) acggaaggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCg < 1:4091050‑M2/40‑1 (MQ=255) aggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAAc < 1:4492836‑M2/45‑1 (MQ=255) aggatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAAc < 1:5202487‑M2/45‑1 (MQ=255) gatccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGc > 2:930602‑M2/105‑151 (MQ=255) atccgtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCt > 2:2013892‑M2/104‑151 (MQ=255) gtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCg > 2:763321‑M2/100‑151 (MQ=255) gtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCg < 1:1867477‑M2/52‑1 (MQ=255) gtagagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattgggcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCg < 2:2724345‑M2/52‑1 (MQ=255) cgagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatctccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGt < 2:165325‑M2/54‑1 (MQ=255) gagctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGtt < 1:2674429‑M2/55‑1 (MQ=255) agctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGttt > 2:4809645‑M2/96‑151 (MQ=255) gctgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTc < 2:643356‑M2/57‑1 (MQ=255) tgtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccagggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGa > 2:872584‑M2/93‑151 (MQ=255) gtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGaa < 1:3350273‑M2/60‑1 (MQ=255) gtgaagctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGaa > 1:764273‑M2/92‑151 (MQ=255) ctagaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGt > 1:4136938‑M2/86‑151 (MQ=255) gagagcggtaggctgcattccgacgcgcgagcgctggaccagcgctgcaccccagcggtcgcggagcctggcccaggcatagcgCACGGACGGCTGTGCAACGTGGAGACGCGCCGGCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTc < 2:4990222‑M2/67‑1 (MQ=255) gaacggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCAc > 2:1253045‑M2/83‑151 (MQ=255) cggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGCTTCGAAGATGGGCACGaa > 2:531451‑M2/80‑151 (MQ=255) ggtaggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAg < 1:2487789‑M2/73‑1 (MQ=255) taggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGAc > 1:3052637‑M2/77‑151 (MQ=255) aggctgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGAcg > 1:4435310‑M2/76‑151 (MQ=255) tgcattccgtcgcgcgggcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGa < 2:4177194‑M2/80‑1 (MQ=255) tgcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGa > 2:3915308‑M2/72‑151 (MQ=255) gcattccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGAc > 2:1537769‑M2/71‑151 (MQ=255) ccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACGAGGt < 2:4312846‑M2/86‑1 (MQ=255) ccgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGt < 2:3047971‑M2/86‑1 (MQ=255) cgtcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGtt < 1:810161‑M2/87‑1 (MQ=255) tcgcgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTga < 1:3655949‑M2/89‑1 (MQ=255) cgcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAgat < 1:921620‑M2/92‑1 (MQ=255) gcgagcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAgatc < 1:1512943‑M2/93‑1 (MQ=255) agcgcttgaacagcggatcaccccatgggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACTCGGACAAGGTTGAgatcgat < 2:3423690‑M2/96‑1 (MQ=255) gcgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAgatcgatc < 2:2676808‑M2/97‑1 (MQ=255) cgcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCa < 2:3818945‑M2/98‑1 (MQ=255) gcttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCAt < 1:4828768‑M2/99‑1 (MQ=255) ttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATta > 1:204129‑M2/51‑151 (MQ=255) ttgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATta < 2:4760113‑M2/101‑1 (MQ=255) tgaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATtat < 1:3103200‑M2/102‑1 (MQ=255) gaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATtata > 1:2860952‑M2/49‑151 (MQ=255) gaacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATtata < 1:201757‑M2/103‑1 (MQ=255) aacagcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGCTCGATCATTATaa > 2:3486342‑M2/48‑151 (MQ=255) agcggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATa < 1:1715110‑M2/107‑1 (MQ=255) ggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGAt < 2:2108404‑M2/110‑1 (MQ=255) ggatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGAt > 2:2281527‑M2/42‑151 (MQ=255) gatcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGGTTCGAAGATGGTCACGAAGACGCGGACCAGGTTGAGATCGCTCATTATAAATAGATc > 1:3492232‑M2/41‑151 (MQ=255) atcaccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATcc < 1:3804044‑M2/112‑1 (MQ=255) caccccattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGCCGCTCCGCCGCCCCGCTAACGCTGCCGGCTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTg > 2:11069‑M2/38‑151 (MQ=255) cattggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTAt < 2:1727695‑M2/119‑1 (MQ=255) ttggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTAttt > 2:185521‑M2/31‑151 (MQ=255) tggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTAtttt > 2:806654‑M2/30‑151 (MQ=255) tggtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTAtttt < 1:4727773‑M2/122‑1 (MQ=255) gtcgcggagcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTaa > 2:4516573‑M2/28‑151 (MQ=255) ggcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCaaa < 2:4024990‑M2/131‑1 (MQ=255) agcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCaaa < 1:2960012‑M2/131‑1 (MQ=255) agcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCaaa < 1:2640358‑M2/131‑1 (MQ=255) gcctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCaaaa < 2:2885379‑M2/132‑1 (MQ=255) ctggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAat < 1:2797093‑M2/134‑1 (MQ=255) tggccaaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAata > 1:1444195‑M2/17‑151 (MQ=255) caaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATc > 2:2363745‑M2/13‑151 (MQ=255) caaggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATc < 1:535269‑M2/139‑1 (MQ=255) ggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTAt < 2:4858460‑M2/142‑1 (MQ=255) ggcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTAt < 1:2730228‑M2/142‑1 (MQ=255) gcatagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTAtt < 2:3334127‑M2/143‑1 (MQ=255) catagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTAttt < 1:924779‑M2/144‑1 (MQ=255) catagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGATGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTAttt < 1:2160109‑M2/144‑1 (MQ=255) aTAGCTAGCGGACGGCTATGAAACGTGGAAACTATCCACCGCCCCGATAACGCTACCGGTTTCGAAGATGGTCACGAAGAAGAGAACAAGATTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATAAAAAAATATATCTATTTg < 2:3688504/151‑1 (MQ=255) tagctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTATTTGa < 1:4558467‑M2/146‑1 (MQ=255) agctCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTATTTGAt < 1:2296539‑M2/147‑1 (MQ=255) tCACGGGCGGCTGTGTAACGTGGAGCCGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTATTTGATCTa < 2:1312393‑M2/150‑1 (MQ=255) cACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTATTTGATCTAt > 1:3568618/1‑151 (MQ=255) | CGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCAGCATAGCTCACGGACGGCTGTGTAACGTGGAGACGCTCCGCCGCCCCGCTAACGCTGCCGGTTTCGAAGATGGTCACGAAGACGCGGACAAGGTTGAGATCGATCATTATAAATAGATCCTGCTTATTTTAAATTCAAAAATATATCTATTTGATCTAT > CP009974/2749573‑2749871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |