Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,897,4710GC69.7% 2811.8 / inf 3563intergenic (‑5249/‑3348)RPPX_08470/RPPX_08480tryptophan synthase subunit beta/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (515/563);  new base C (1229/1252);  total (1746/1817)
Fisher's exact test for biased strand distribution p-value = 3.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 3631 total aligned reads displayed.

CTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGATATCATCAA  >  CP009974/1897321‑1897620
                                                                                                                                                      |                                                                                                                                                     
   cacCATCACGCTGACCAATAAAGACGGCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGc                                                                                                                                                    <  1:4086063/151‑1 (MQ=11)
        tCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCaa                                                                                                                                               <  2:4612446/151‑1 (MQ=255)
         cACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAAc                                                                                                                                              <  1:4377027/151‑1 (MQ=11)
         cACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAAc                                                                                                                                              >  2:1048531/1‑151 (MQ=255)
          aCGCTGACCAATAAGGACGGCCTGCCGATCAACAACCACTCGGAGCTGTCCTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCACCAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCaatg                                                                                                                                             <  2:2765808/151‑3 (MQ=11)
            gCTGACCAATAAAGACGGCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCaatgcg                                                                                                                                           >  1:1668916/1‑147 (MQ=11)
            gCTGACCAACAAAGACGGCCTGCCGATCAACAACCACTCGGAGCTGCACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCGAACAGCACCACGGGCTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAg                                                                                                                                           <  2:3721987/151‑1 (MQ=11)
             cTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGc                                                                                                                                          >  1:2499030/1‑151 (MQ=255)
                 ccAACAAAGACGGCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAGCCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCggt                                                                                                                                      >  2:3169671/1‑151 (MQ=11)
                      aaaGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTTGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGCCa                                                                                                                                 >  1:3992870/1‑151 (MQ=11)
                      aaaGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCa                                                                                                                                 <  2:1574136/151‑1 (MQ=255)
                       aaGACGGCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCaa                                                                                                                                >  1:769123/1‑151 (MQ=11)
                        aGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAAt                                                                                                                               >  2:1965737/1‑151 (MQ=255)
                        aGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAAt                                                                                                                               <  1:4802096/151‑1 (MQ=255)
                           tggtctgctgATCAACAACCACTCGGAGCTGTAATTCAGGCTGACCGACGGCACCACCGTCGTTGTGGCAGCAAACAGCACAACCGGTTCGGTGCCTGTAGCTGCTCCTGAAAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGcc                                                                                                                            <  2:2563885/147‑1 (MQ=9)
                           cGGCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCTACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGcc                                                                                                                            <  2:3534380/151‑1 (MQ=14)
                             gCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAGCCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCAt                                                                                                                          >  2:4010573/1‑151 (MQ=14)
                                    gATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGAcgcg                                                                                                                   >  2:177135/1‑151 (MQ=255)
                                      tCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAATGCGCCGGGGGTCAATGCCACCGAcgccgc                                                                                                                 >  2:3805321/1‑148 (MQ=14)
                                       caacaaCCACTCGGAGCTTTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCGGCCAACAGCACCACGGGTTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGAcgccgtt                                                                                                                >  1:315472/1‑147 (MQ=17)
                                         acaacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAg                                                                                                              >  1:1508410/1‑151 (MQ=255)
                                          caacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTACAACCGCCCCGGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAgc                                                                                                             >  2:4184172/1‑151 (MQ=17)
                                             ccACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAgcggc                                                                                                          <  1:4706159/151‑1 (MQ=255)
                                             ccACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAGCCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAgcggc                                                                                                          <  1:2322639/151‑1 (MQ=17)
                                              cACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCggtgg                                                                                                                                    <  1:214136/124‑1 (MQ=255)
                                              cACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAgcggcg                                                                                                         >  2:5206198/1‑151 (MQ=17)
                                                  cGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGa                                                                                                     <  1:3450581/151‑1 (MQ=255)
                                                  cGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGa                                                                                                     <  2:589353/151‑1 (MQ=17)
                                                  cGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGa                                                                                                     <  2:4344270/151‑1 (MQ=255)
                                                  cGGAGCTGTACTTCAAGCTCACCGCCGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCTACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGa                                                                                                     <  1:1945997/151‑1 (MQ=255)
                                                   ggAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGAt                                                                                                    >  1:2937738/1‑151 (MQ=17)
                                                     cgCTGTACGTCAAGCTGGCCGACGGCACCACCGTCGTCGTGGCAGCGAACAGCACCACGGGCTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGc                                                                                                  <  2:2979264/150‑1 (MQ=18)
                                                     aGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGc                                                                                                  >  1:1842514/1‑151 (MQ=255)
                                                     aGCTGTACTTCAAGCTGACCGACGGCACCACCGTCCTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGc                                                                                                  >  1:3356133/1‑151 (MQ=18)
                                                      gCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGcg                                                                                                 >  2:150587/1‑150 (MQ=18)
                                                       ctttACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCGGCCAACAGCACCACGGGTTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTTAGCGGCGCTGATGcgt                                                                                                <  2:5126949/148‑3 (MQ=18)
                                                       cTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAGCCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGcgt                                                                                                <  2:3348422/151‑3 (MQ=18)
                                                        tGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATg                                                                                               >  1:4871146/1‑151 (MQ=255)
                                                           aCTTCAAGCTGACCGACGGCACCACCGTCGTTGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGaa                                                                                            <  1:2765103/151‑1 (MQ=17)
                                                            cTTCAAGCTGACCGACGGCACCACTCTCGTTGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTCGGTACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCTGATGCATGGAAg                                                                                           <  2:687035/151‑1 (MQ=18)
                                                             ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGt                                                                                          >  2:4934559/1‑151 (MQ=255)
                                                              tCAAGCTGACCGACGGCACCACCGTCGGCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGtt                                                                                         <  2:4445908/151‑1 (MQ=18)
                                                              tCAAGCGGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCAACGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACTAACGCGCCGGTGGTCAATGCCATCGATGCCGTCAGCGGCGCAGATGCATGGAAGtt                                                                                         <  2:3263471/151‑1 (MQ=21)
                                                               cAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTc                                                                                        <  1:1079415/151‑1 (MQ=18)
                                                                aaGCTGACCGACGGCACCACTGTCGTCGTGGCGGCCAACAGCACCACGGGTTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTTAGCGGCGCTGATGCGTGGAAGTTCg                                                                                       >  2:2199030/1‑151 (MQ=21)
                                                                    tggccGACGTCACCACCTTCGTGTGGGCAGCCAACAGCTCCACCGGTTCGGCGACTGTAGCTGCAGCAGACGACGTCTATGTCGGCACCAACGCTCCGGTGGTCAATGCCATCGACGCCGCCAGCGGCGCTGATGCGTGGAAGTTCGaaaa                                                                                   <  1:4563478/148‑1 (MQ=255)
                                                                     gACCGGCGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAaac                                                                                  <  2:4720963/151‑1 (MQ=255)
                                                                      aCCGGCGGCACCACCGTCGTCGTGGCAGCCAACAGCACCAACGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACTAACGCGCCGGTGGTCAATGCCATAGATGCCGTCAGCGGCGCAGATGCATGGAAGTTCGAAaacc                                                                                 <  2:4809345/151‑1 (MQ=21)
                                                                       ccGACGGCACCACTGTCGTTGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTCGGTACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCTGATGCATGGAAGTTCGAAaacct                                                                                >  1:5036758/1‑151 (MQ=18)
                                                                       ccGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAGCCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAaacct                                                                                <  1:4287645/151‑1 (MQ=21)
                                                                        cGACGGCACCACCGTCGTCGTGGCAGCGAACAGCACCACGGGCTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAaacctg                                                                               <  1:1001045/151‑1 (MQ=25)
                                                                        cGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAaacctg                                                                               >  2:409866/1‑151 (MQ=21)
                                                                         gACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAaacctga                                                                              >  1:3253023/1‑151 (MQ=21)
                                                                           cGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCACGGAAGTTCGAAaacctgaac                                                                            >  2:4529341/1‑151 (MQ=255)
                                                                            ggCACCACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAaacctgaacc                                                                           <  1:2243336/151‑1 (MQ=255)
                                                                              caccacTGTCGTCGTGGCGGCCAACAGCACCACGGGTTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTTAGCGGCGCTGATGCGTGGAAGTTCGAAaacctgaacctg                                                                         >  2:1449732/1‑151 (MQ=255)
                                                                              caccacCGTCGTCGTGGCAGCGAACAGCACCACGGGCTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAaacctgaacctg                                                                         <  2:307150/151‑1 (MQ=255)
                                                                                  actgtcgtcgtGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACa                                                                     >  2:2872321/4‑151 (MQ=255)
                                                                                  accGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCTACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCTGATGCATGGAAGCTCGAAAACCTGAACCTGGACa                                                                     >  2:1143460/1‑151 (MQ=25)
                                                                                   ctgtcgtcgtGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAGCCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACaa                                                                    <  1:4191899/149‑1 (MQ=25)
                                                                                   ccGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCTACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCTGATGCATGGAAGTTCGAAAACCTGAACCTGGACaa                                                                    <  1:2693044/151‑1 (MQ=25)
                                                                                   ccGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACaa                                                                    <  2:885987/151‑1 (MQ=25)
                                                                                       cgtcgtGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACt                                                                <  2:3446629/151‑1 (MQ=255)
                                                                                        gttgtGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGAccc                                                               <  1:1598432/148‑3 (MQ=21)
                                                                                        gtcgtGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTc                                                               >  1:5204653/1‑151 (MQ=255)
                                                                                         gcgtGGCAGCCAACAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGAcccc                                                              <  2:1678195/150‑1 (MQ=25)
                                                                                          cgtGGCAGCCAACAGCACCACCGGTTCGCCTACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCTGATGCATGGAAGTGCGAAAACCTGAACCTGGACAAAAccccc                                                             <  1:5111587/151‑2 (MQ=25)
                                                                                           gtGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGACCCTGGACAAGACTCCAg                                                            <  2:1240542/151‑1 (MQ=255)
                                                                                           gtGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAg                                                            <  2:1335813/151‑1 (MQ=255)
                                                                                             ggCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTc                                                          >  1:495677/1‑151 (MQ=255)
                                                                                              gCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCa                                                         <  1:65592/151‑1 (MQ=255)
                                                                                                  ccAACAGCACCAACGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACTAACGCGCCGGTGGTCAATGCCATCGATGCCGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCAc                                                     >  1:2838960/1‑151 (MQ=37)
                                                                                                   gaaCAGCACCACGGGCTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCAcc                                                    >  1:1739473/2‑151 (MQ=255)
                                                                                                   cAACAGCACCACCGGTTCGGCTACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCTGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAAACCCCCGTCAGCAcc                                                    <  2:3894108/151‑1 (MQ=37)
                                                                                                   cAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCAct                                                    <  2:2306615/151‑2 (MQ=25)
                                                                                                    aaCAGCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCg                                                   >  2:503722/1‑151 (MQ=255)
                                                                                                      cAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAg                                                 >  1:1418220/1‑151 (MQ=255)
                                                                                                        gCACCACCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCCGTCAGCACCGAGGt                                               >  2:2472554/1‑151 (MQ=255)
                                                                                                         caccacGGGCTCGGCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGtc                                              >  1:204135/1‑150 (MQ=255)
                                                                                                         caccacCGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTg                                              <  2:1867461/151‑1 (MQ=255)
                                                                                                          accaccGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCCGTCAGCACCGAGGTGa                                             >  1:4471890/1‑151 (MQ=255)
                                                                                                          accaccGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTGa                                             >  2:2664107/1‑151 (MQ=255)
                                                                                                           ccaccGGTTCGGCTACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCTGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAAACCCCCGTCAGCACCGAGGTAAc                                            >  1:3557899/1‑151 (MQ=37)
                                                                                                            caccGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTGAcc                                           <  2:3620395/151‑1 (MQ=255)
                                                                                                               cGGTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTGACcgac                                        <  1:3674288/151‑1 (MQ=37)
                                                                                                                ggTTCGGCGACTGTAGCTGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCCGTCAGCACCGAGGTGACcgacg                                       >  1:1319575/1‑151 (MQ=255)
                                                                                                                    cGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTGACCGACGAGcc                                   >  1:579608/1‑151 (MQ=255)
                                                                                                                     ggCGACTGCAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTCACCGACGAGCCa                                  <  2:2398136/151‑1 (MQ=255)
                                                                                                                             cAACTGCCCCGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTTAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTAcccc                          <  1:2586237/151‑1 (MQ=255)
                                                                                                                                  gCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTGACCGACGAGCCTGGCACCCCAGGCa                     >  1:1210531/1‑151 (MQ=255)
                                                                                                                                   ccccGGACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTTAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGTACCCCAGGCaa                    >  1:971124/1‑151 (MQ=255)
                                                                                                                                    cccGGACAACGTCTATGTCGGTACCAACGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCTGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAACACCGAGGTGACCGACGAGCCAGGCACTCCAGGCagc                   <  1:3780967/151‑3 (MQ=255)
                                                                                                                                    accagccAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCCGTCAGCACCGAGGTGACCGACGAGCCAGGCACCCCGGGCAAc                   <  1:4639306/145‑1 (MQ=255)
                                                                                                                                    accagACAACGTCTATGTCGGCACCAATGCGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTGACCGACGAGCCAGGCACCCCGGGCAAc                   <  1:3889389/147‑1 (MQ=37)
                                                                                                                                       ggACAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTCACCGACGAGCCAGGTACCCCGGGTAACGaa                >  1:2409337/1‑151 (MQ=255)
                                                                                                                                         aCAACGTCTATGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTCACCGACGAGCCAGGTACCCCGGGTAACGAAgg              >  1:8451/1‑151 (MQ=255)
                                                                                                                                         aCAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACCCCCGTCAGCACCGAGGTGACCGACGAGCCAGGCACCCCGGGCAACGAAgg              <  2:2094893/151‑1 (MQ=255)
                                                                                                                                                cTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTGACCGACGAGCCTGGCACCCCAGGCAACGAAGGCGACatc       <  1:3044354/151‑1 (MQ=255)
                                                                                                                                                  aTGTCGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCTGATGCGTGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTCACCGACGAGCCAGGTACCCCGGGTAACGAAGGCGATatcat     <  2:4274452/151‑1 (MQ=255)
                                                                                                                                                  aTGTAGGCACCAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGAAGCATGGAAGTTCGAAAACCTGACCCTGGACAAGACTCCAGTCAGCACCGAGGTGACCGACGAGGCTGGCACCCCAGGCAACGAAGGCGACatcgt     <  2:801637/151‑3 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCGACTGCAACCGCCCCGGACAACGTCTATGTGGGCACTAACCAGCCGGTGGTCAATGCCATCGACGCGGTCAGCGGCGCAGATGCATGGAAGTTCGAAAACCTGAACCTGGACAAGACTCCAGTCAGCACCGAGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGATATCATCAA  >  CP009974/1897321‑1897620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑