Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 382,181 T→C intergenic (+317/+212) RPPX_01535 → / ← RPPX_01540 guanine permease/5‑hydroxyisourate hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009974382,1810TC97.7% 587.8 / 1.7 215intergenic (+317/+212)RPPX_01535/RPPX_01540guanine permease/5‑hydroxyisourate hydrolase
Reads supporting (aligned to +/- strand):  ref base T (2/3);  new base C (107/101);  total (109/106)
Fisher's exact test for biased strand distribution p-value = 6.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 215 total aligned reads displayed.

CGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAG  >  CP009974/382033‑382327
                                                                                                                                                    |                                                                                                                                                  
cgcAAATTCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGt                                                                                                                                                  >  1:639508/1‑151 (MQ=255)
 gcAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGtt                                                                                                                                                 >  1:2010868/1‑151 (MQ=255)
 gcAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGtt                                                                                                                                                 >  1:2243355/1‑151 (MQ=255)
  cAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTg                                                                                                                                                <  2:2774355/151‑1 (MQ=255)
  cAAATCCAGCTGCGTGAAATGGGTCGAATCAGACGTAGGAGCCGCTGTCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAAGCTCCACCCGCCGTTCACCGTTg                                                                                                                                                <  2:3281740/151‑1 (MQ=18)
    aaTCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgct                                                                                                                                              >  1:4884633/1‑150 (MQ=255)
      tgccACTGCGTCAAGTGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTtgctgc                                                                                                                                            <  2:2416908/149‑1 (MQ=255)
      tCCCACTGCGTCAAATAGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCAAATCTCCACCCGCCGTTCACCGTtgctgc                                                                                                                                            <  2:2013982/151‑1 (MQ=25)
        ccACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgctgccc                                                                                                                                          >  2:3370442/1‑150 (MQ=255)
        ccACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCGGCGCGGCCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGTTCACCGTTGctgccg                                                                                                                                          <  2:4138560/151‑1 (MQ=25)
         cACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCAACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCtgccgc                                                                                                                                         <  1:2332922/151‑1 (MQ=255)
          aCTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCtgccgcc                                                                                                                                        <  2:3224981/151‑2 (MQ=255)
            tGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCAc                                                                                                                                      <  2:3376681/151‑1 (MQ=255)
            tGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCAc                                                                                                                                      >  1:9824/1‑151 (MQ=255)
             gCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCtgccgccccc                                                                                                                                     >  2:672270/1‑147 (MQ=255)
               gTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGt                                                                                                                                   >  2:4089784/1‑151 (MQ=255)
                tCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGtc                                                                                                                                  >  2:3204770/1‑150 (MQ=255)
                 cAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTAt                                                                                                                                 <  1:5067780/151‑1 (MQ=21)
                   aagggCCCGAAACAGACGTAGGAGCCTCTATCTTGCTTAACGTTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTc                                                                                                                               <  2:921223/148‑1 (MQ=18)
                   aaTGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTc                                                                                                                               <  2:1635704/151‑1 (MQ=21)
                     tGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTcgc                                                                                                                             <  1:3126097/151‑1 (MQ=21)
                      ggCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTcgcg                                                                                                                            <  1:1521359/151‑1 (MQ=18)
                        cccGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCggg                                                                                                                          <  2:3504580/151‑1 (MQ=255)
                            aaaCAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTaaa                                                                                                                      <  1:34232/151‑1 (MQ=18)
                            aaaCAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGGCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTaaa                                                                                                                      <  2:5073727/151‑1 (MQ=18)
                               cAGAGGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAccc                                                                                                                   >  2:4318230/1‑151 (MQ=18)
                               cAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAccc                                                                                                                   <  2:3489113/151‑1 (MQ=255)
                               cAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAccc                                                                                                                   >  1:635765/1‑151 (MQ=18)
                               cAGACGTAGGAGCCACTATCTTGCTTAACAGTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAccc                                                                                                                   <  2:2990730/151‑1 (MQ=18)
                                aGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCg                                                                                                                  <  2:4447433/151‑1 (MQ=255)
                                aGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCg                                                                                                                  >  1:3470239/1‑151 (MQ=255)
                                aGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCg                                                                                                                  >  1:3876772/1‑151 (MQ=18)
                                   cGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTc                                                                                                               <  2:1191375/151‑1 (MQ=255)
                                   cGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTc                                                                                                               >  1:1899104/1‑151 (MQ=18)
                                    gTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTcc                                                                                                              >  1:899506/1‑151 (MQ=18)
                                     tAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCt                                                                                                             <  2:3465423/151‑1 (MQ=255)
                                     tAGGAGCCACTATCTTGCTGAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCt                                                                                                             <  1:1324502/151‑1 (MQ=255)
                                      aGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTa                                                                                                            <  1:484766/151‑1 (MQ=17)
                                       ggAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTac                                                                                                           >  2:2918734/1‑151 (MQ=255)
                                        gAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca                                                                                                          <  1:1019937/151‑1 (MQ=17)
                                          gCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTACACCCGCTCCTACAcc                                                                                                        >  1:3847605/1‑151 (MQ=17)
                                           ccACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCt                                                                                                       >  1:3913940/1‑151 (MQ=17)
                                               tATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATc                                                                                                   <  1:5039742/151‑1 (MQ=17)
                                               tATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATc                                                                                                   >  1:417570/1‑151 (MQ=17)
                                                 tCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCgg                                                                                                 >  2:262012/1‑151 (MQ=255)
                                                   ttGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGCAAACCCGCTCCTACACCTGCTCggtg                                                                                               >  2:4144184/1‑151 (MQ=17)
                                                     gCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGAAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggtggt                                                                                             <  2:1756253/151‑1 (MQ=17)
                                                      cTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGgtggtg                                                                                            >  1:1080014/1‑151 (MQ=17)
                                                        tAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTCCCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGa                                                                                          <  1:3021040/151‑1 (MQ=17)
                                                         aaCATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGtggtggcc                                                                                         >  1:3297267/1‑149 (MQ=17)
                                                         aaCATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGac                                                                                         >  2:4721588/1‑151 (MQ=17)
                                                               ggAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACAt                                                                                   >  1:4653809/1‑151 (MQ=255)
                                                               ggAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACAt                                                                                   <  2:2151090/151‑1 (MQ=17)
                                                                gAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATg                                                                                  <  2:1529466/151‑1 (MQ=17)
                                                                 aaaGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGt                                                                                 <  2:4286509/151‑1 (MQ=255)
                                                                    ggCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTCCACCTGATCGGTGGTGGACACACATGTCgg                                                                              >  2:3576012/1‑151 (MQ=255)
                                                                     gCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCggg                                                                             >  2:1788524/1‑151 (MQ=255)
                                                                        tGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGt                                                                          <  1:4407959/151‑1 (MQ=255)
                                                                         gcgcGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGACCGGGGGGGGACACACATGTCCGGCGtc                                                                         >  2:3408014/1‑150 (MQ=14)
                                                                         gcgcGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTCCACCGTTGCTGCCGCCACCGTATTCGCGGGCAAACCCGCTCCTCCACCGGCTCGGTGGCGGCCACGCATGTCGGGGGtg                                                                         >  2:4549500/1‑150 (MQ=14)
                                                                          cgcgGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTg                                                                        <  1:3588777/151‑1 (MQ=17)
                                                                          cgcgGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTg                                                                        >  1:4035031/1‑151 (MQ=255)
                                                                           gcgGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTgg                                                                       <  1:1180580/151‑1 (MQ=255)
                                                                            cgGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTggg                                                                      <  2:2348753/151‑1 (MQ=255)
                                                                             ggTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGc                                                                     >  1:1582135/1‑151 (MQ=255)
                                                                              gTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGca                                                                    <  1:4801329/151‑1 (MQ=17)
                                                                              gTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGGTGGGca                                                                    >  1:4073112/1‑151 (MQ=17)
                                                                              gTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGCTGGGcc                                                                    >  2:4256676/1‑150 (MQ=17)
                                                                                 gtcgtgTAGGAGCGGGTTTGCCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACGCCTGa                                                                                                     <  1:3190646/110‑1 (MQ=255)
                                                                                  ccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGCGGTGGACACACATGTCGGGCGGTGGGcacacg                                                                >  2:4995311/1‑149 (MQ=14)
                                                                                   cccGGAGGCGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGc                                                               <  2:3190600/151‑1 (MQ=14)
                                                                                      gTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCcgt                                                            >  1:3622174/1‑151 (MQ=17)
                                                                                        gggggCGGGTTTAGCGGGGAAGAGGCCGGGCCTGCGGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCcgtcg                                                          <  1:294439/147‑1 (MQ=17)
                                                                                         ggAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGCTCGGTGGTGGACACACATGTCGGGGGATGGGCACTGGCcgtggt                                                         >  2:4112145/1‑151 (MQ=17)
                                                                                          gAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGGTGGGCACAGGCcgtcgcg                                                        >  2:5200945/1‑149 (MQ=17)
                                                                                               ggTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGAAAACCCGCTCCTCCACCTGTTCGGTACTGGACACACACGTCGCTGGCTGGGCACAGGccgccgcgcagcc                                                   >  2:1424050/1‑144 (MQ=14)
                                                                                                          gAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGcaca                                                                  >  2:2524893/1‑125 (MQ=17)
                                                                                                          gAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGcaca                                                                  <  1:2524893/125‑1 (MQ=17)
                                                                                                                      ccTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGcc                            <  1:2781589/151‑1 (MQ=255)
                                                                                                                         gctgGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGc                         <  1:4980720/151‑1 (MQ=255)
                                                                                                                          ctgGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGCCACACATGTCGGGGGTTGCGCACAGGCCGTGGTGTAGGAGCGGGTTTACCCGCGCAGCGGCCGGca                        >  2:3862731/1‑151 (MQ=14)
                                                                                                                          ctgGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGca                        <  2:3876772/151‑1 (MQ=255)
                                                                                                                          ctcgCCAATCTCCCCCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGca                        <  1:2141815/148‑1 (MQ=14)
                                                                                                                           tgGCCAATCTCCACCCGCCGTGCACGGTTGCTGCCGCCACCGTATTTGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcac                       <  2:3725114/151‑1 (MQ=17)
                                                                                                                            ggCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca                      >  1:3236806/1‑151 (MQ=17)
                                                                                                                              ccAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGGCACACATGTCGTGGGTTGGGCACAGGCCGGCGTGTAGGAGCTGGTTTACCCGCGCAGAGGCCGGCACAgg                    >  2:1842347/1‑151 (MQ=14)
                                                                                                                              ccAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAgg                    <  1:4276063/151‑1 (MQ=255)
                                                                                                                              ccAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAgg                    <  1:4276851/151‑1 (MQ=255)
                                                                                                                                  cctCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAt                <  2:734529/149‑1 (MQ=255)
                                                                                                                                   ctCCACCCGCCGTTCACCGTTGCTGCCGCGACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATg               <  1:4024798/150‑1 (MQ=255)
                                                                                                                                    tCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGc              >  2:3553846/1‑151 (MQ=255)
                                                                                                                                    cccACCCGCCGTCCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGc              <  1:2085860/150‑1 (MQ=255)
                                                                                                                                      cACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCaa            <  1:331596/151‑1 (MQ=255)
                                                                                                                                      cACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCaa            >  1:2433781/1‑151 (MQ=255)
                                                                                                                                           gccgTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAc       >  1:1215053/1‑151 (MQ=255)
                                                                                                                                             cgTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGGTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcag     >  2:429471/1‑151 (MQ=255)
                                                                                                                                              gtgcACCGTTGCTGCCGCCCCCGGATCCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcagc    <  2:2464819/148‑1 (MQ=18)
                                                                                                                                               ttCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcagca   <  1:2931311/151‑1 (MQ=255)
                                                                                                                                               ttCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcagca   >  1:4540895/1‑151 (MQ=255)
                                                                                                                                                tCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcagcag  <  1:2044407/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CGCAAATCCCACTGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAG  >  CP009974/382033‑382327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: