| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 2,119,429 | T→C | intergenic (+46/‑104) | RPPX_09480 → / → RPPX_09485 | chromosome partitioning protein ParB/ATP synthase F0F1 subunit I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 2,119,429 | 0 | T | C | 99.0% | 1091.0 / ‑1.4 | 308 | intergenic (+46/‑104) | RPPX_09480/RPPX_09485 | chromosome partitioning protein ParB/ATP synthase F0F1 subunit I |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (148/157); total (150/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 308 total aligned reads displayed.
CTCGGCTGTGCAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGC > CP009974/2119281‑2119576 | tgtgCAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAgg < 2:1635925/151‑1 (MQ=255) gtgCAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAggg < 1:2911905/151‑1 (MQ=255) tgCAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAgggg > 1:2735370/1‑151 (MQ=255) gCAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACACTTCCTGTTCTACCGCGAAGTCGGCAATCACTACCGAAGACCTGAATAGGGGt > 2:3967163/1‑151 (MQ=255) gCAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGt < 1:5106804/151‑1 (MQ=255) cAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGtt < 2:1844290/151‑1 (MQ=255) gATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTaa > 1:325081/1‑151 (MQ=255) gATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTaa < 1:3085652/151‑1 (MQ=255) aTCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAAt < 1:4217115/151‑1 (MQ=255) aTCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAAt < 1:4830117/151‑1 (MQ=255) tCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATc < 2:2592083/151‑1 (MQ=255) tCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATc < 1:1630495/151‑1 (MQ=255) tCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATc < 2:5027602/151‑1 (MQ=255) gTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCAc > 2:1940732/1‑151 (MQ=255) tCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCAcc > 1:4586748/1‑151 (MQ=255) tCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCAcc < 1:871050/151‑1 (MQ=255) cATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCAccc > 1:1693024/1‑151 (MQ=255) tGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCt < 1:4319156/151‑1 (MQ=255) ggCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCta > 1:2297025/1‑151 (MQ=255) caacaaGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCtata > 2:2158575/1‑151 (MQ=255) aacaaGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCtataa > 1:4653997/1‑150 (MQ=255) caaGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATActc < 1:5165277/151‑1 (MQ=255) aaGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATActct > 2:2642023/1‑151 (MQ=255) aGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTg < 1:4520078/151‑1 (MQ=255) aGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTg < 2:2871860/151‑1 (MQ=255) gggCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTgc > 2:3315265/1‑151 (MQ=255) ggCAAAGGCCAGTTGGTTATTCGCTACCACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTgcg < 1:1015180/151‑1 (MQ=255) ggCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTgcg < 1:3544036/151‑1 (MQ=255) gCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTgcgc > 2:3812993/1‑151 (MQ=255) cAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTgcgcg < 1:3468985/151‑1 (MQ=255) aaGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCa < 2:188139/151‑1 (MQ=255) ccAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCAtttt < 1:2829957/151‑1 (MQ=255) cAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTg < 1:1209663/151‑1 (MQ=255) cgTTGGTTATTCGCTATAACGCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGt < 2:4081306/150‑1 (MQ=255) ggTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGc < 1:1063096/151‑1 (MQ=255) tATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGcaca > 1:1953966/1‑151 (MQ=255) tATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGcaca > 2:3603758/1‑151 (MQ=255) aTTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACaa > 2:1287637/1‑151 (MQ=255) aTTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACaa < 1:1777430/151‑1 (MQ=255) aTTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACGCTGCGCGCATTTTGTCGGCACaa > 2:3323142/1‑151 (MQ=255) cGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAGACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAAtt > 2:2112983/1‑151 (MQ=255) gCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTa < 1:2398327/151‑1 (MQ=255) tACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATg < 2:1331889/151‑1 (MQ=255) cAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGcc > 1:1475561/1‑151 (MQ=255) aaCTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCa < 1:3028309/151‑1 (MQ=255) aaCTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCa > 1:2637765/1‑151 (MQ=255) aaCTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCa > 2:4944350/1‑151 (MQ=255) cTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAg < 2:1000419/151‑1 (MQ=255) cTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCAt < 1:602355/151‑1 (MQ=255) cTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCAt < 2:801197/151‑1 (MQ=255) tGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAg > 1:4414211/1‑151 (MQ=255) aCGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCt < 2:3240358/151‑1 (MQ=255) ttGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACtt < 2:1492598/151‑1 (MQ=255) ttGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACtc > 2:2915498/1‑150 (MQ=255) tGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACttg > 1:3983758/1‑151 (MQ=255) cAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACttgtt > 2:2422205/1‑151 (MQ=255) aaGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACttgttg < 2:2316014/151‑1 (MQ=255) aGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTgg > 1:1132183/1‑151 (MQ=255) ggCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGt < 2:4161061/151‑1 (MQ=255) gCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTc < 2:517377/151‑1 (MQ=255) gTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACtt < 1:186132/142‑1 (MQ=255) gTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGa < 2:1073874/151‑1 (MQ=255) gTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGa > 2:1187265/1‑151 (MQ=255) tGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGAc > 2:4369194/1‑151 (MQ=255) ctcgctcACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACtt > 2:953497/1‑151 (MQ=255) tcgctcACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTc < 2:1431136/151‑1 (MQ=255) cgctcACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTcc < 2:3379793/151‑1 (MQ=255) ctcACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCga < 2:2035159/151‑1 (MQ=255) tcACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCgag > 1:3343854/1‑151 (MQ=255) tcACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCgag > 2:3113111/1‑151 (MQ=255) aTCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGc > 2:4844829/1‑151 (MQ=255) aTCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGc < 1:559633/151‑1 (MQ=255) ccGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAg > 2:4883399/1‑151 (MQ=255) gCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGtt > 1:2193972/1‑151 (MQ=255) cTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTtg < 2:4483000/151‑1 (MQ=255) gAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTtgtg < 1:2065042/151‑1 (MQ=255) gAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTtgtg < 2:4304502/151‑1 (MQ=255) aaCAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGAt > 2:1777017/1‑151 (MQ=255) aTTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGaa < 1:4913135/151‑1 (MQ=255) tCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAAt < 1:1914678/151‑1 (MQ=255) cTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATac < 1:672991/151‑1 (MQ=255) tgttgtAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATacg > 2:525861/1‑151 (MQ=255) gttgtAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATacgc < 1:3710889/151‑1 (MQ=255) gttgtAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATacgc > 1:1433617/1‑151 (MQ=255) tgtAGCGCGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGACATacgcac > 2:2385998/1‑151 (MQ=255) gcgcGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAAtt < 2:4684080/84‑1 (MQ=255) gcgcGAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCa < 2:2071798/151‑1 (MQ=255) cgcgAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCaa < 1:3812993/151‑1 (MQ=255) gAAGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATACACCCCTATACTCTGCGCGCATTTTGTCGGCAAAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGAACGCCAAAcc > 1:2510787/1‑151 (MQ=255) aaGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATCATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGGAATACGCACGCCAAACCg > 2:699313/1‑151 (MQ=255) aGTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCgc < 1:4160835/151‑1 (MQ=255) gTCGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCgcc < 2:2507421/151‑1 (MQ=255) cGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGGACAAATTATGCCAAGTCATAGCTGACTTCTTGGTCGCCTTCCGAGGAGCAGTTGTGATGTAAATACGCACGCTAAACCgcctg > 2:4578011/1‑151 (MQ=255) cGGAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCgcctg > 1:2313624/1‑151 (MQ=255) ggAAATCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCgcctgc > 2:2281458/1‑151 (MQ=255) aaaTCACTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCgcctgcct < 1:2214951/151‑1 (MQ=255) aCTACCGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCa < 2:2810196/151‑1 (MQ=255) cGAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCt < 1:3603758/151‑1 (MQ=255) gAAGAGCTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTg > 1:1983763/1‑151 (MQ=255) gagCTGGATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGc < 2:3768693/151‑1 (MQ=255) | CTCGGCTGTGCAGATCCGTCATGGCAACAAGGGCAAAGGCCAGTTGGTTATTCGCTACAACTCGCTTGACGAGTTGCAAGGCGTGCTCGCTCACATCCGCTGAAACAATTCCTGTTGTAGCGCGAAGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGC > CP009974/2119281‑2119576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |