BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	418,393	C→T	C10Y (TGC→TAC)	RPPX_01715 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	418,393	0	C	T	99.2%	365.8 / ‑5.6	121	C10Y (TGC→TAC)	RPPX_01715	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (61/59); total (62/59)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 121 total aligned reads displayed.

AAACTGTACTGTGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGC‑GTACTCCCGGGA  >  CP009974/418245‑418479

aaaCTGTACTGTGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAg                                                                                       <  1:5094144/151‑1 (MQ=255)

aaaCTGTACTGTGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAg                                                                                       <  1:4882148/151‑1 (MQ=255)

aaaCTGTACTGTGCTGTTGCTGCGTTGCTGCGGTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAg                                                                                       <  1:4883478/151‑1 (MQ=255)

  actgtactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGc                                                                                     >  1:1012708/1‑151 (MQ=255)

   ctgtactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCACGCGCCCGAACGTATGcc                                                                                    >  1:3236797/1‑151 (MQ=255)

    tgtactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCt                                                                                   <  1:1067495/151‑1 (MQ=255)

    tgtactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCt                                                                                   >  2:2205570/1‑151 (MQ=255)

    tgtactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCt                                                                                   >  2:4874474/1‑151 (MQ=255)

     gtactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGCTCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCtt                                                                                  <  2:4802639/151‑1 (MQ=255)

     gtactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCtt                                                                                  >  1:4144875/1‑151 (MQ=255)

      tactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTg                                                                                 <  2:715544/151‑1 (MQ=255)

      tactgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTg                                                                                 <  1:3798733/151‑1 (MQ=255)

       tctgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGc                                                                                <  2:3808684/150‑1 (MQ=255)

       actgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGc                                                                                >  2:235534/1‑151 (MQ=255)

        ctgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCg                                                                               <  2:27331/151‑1 (MQ=255)

        ctgtGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCg                                                                               <  1:3261240/151‑1 (MQ=255)

         tgtgCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGCCTTCAGGCGGCCGCACGTAGGCCTTGCgg                                                                              >  2:3892408/1‑151 (MQ=255)

         tgtgCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCgg                                                                              <  2:4368207/151‑1 (MQ=255)

           tgCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAg                                                                            >  1:4393623/1‑151 (MQ=255)

             cTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAggg                                                                          >  2:330475/1‑150 (MQ=255)

             cTGTTGCTGCGTTGCTGCGGTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAggg                                                                          <  2:4461035/151‑2 (MQ=255)

              tGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAggga                                                                         <  1:986570/151‑3 (MQ=255)

              tGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGAGCTTGATCTTGATCTTCGCGTCTTCAGGAGGCCGAACGTAGGCCTTGCGGAgggg                                                                         >  2:735815/1‑149 (MQ=255)

               gttgctgcgttgctgcgttgctgcGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAATGTAGGCCTTGCggagggag                                                                        >  1:1010625/1‑151 (MQ=255)

                 tgctgcgttgctgcgttgctgcgtTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGt                                                                      <  2:4684208/151‑1 (MQ=255)

                 tgctgcgttgctgcgttgctgcgtTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGt                                                                      <  2:1461912/151‑1 (MQ=255)

                 tgctgcgttgctgcgttgctgcgtTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGt                                                                      >  2:2288786/1‑151 (MQ=255)

                 tgctgcgttgctgcgttgctgcgtTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGt                                                                      >  1:4518403/1‑151 (MQ=255)

                 tgctgcgttgctgcgttgctgcgtTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGt                                                                      <  2:1249159/151‑1 (MQ=255)

                  gctgcgttgctgcgttgctgcgttGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTg                                                                     <  1:2288481/151‑1 (MQ=255)

                   ctgcgttgctgcgttgctgcgttgCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGTCCGAACGTAGGCCTTGCGGAGGGAGGTgg                                                                    >  1:810602/1‑150 (MQ=255)

                    tgcgttgctgcgttgctgcgttgcTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGAc                                                                   <  1:2134920/151‑1 (MQ=255)

                    tgcgttgctgcgttgctgcgttgcTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGAc                                                                   >  2:448571/1‑151 (MQ=255)

                     gcgttgctgcgttgctgcgttgctGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACg                                                                  >  1:4160246/1‑151 (MQ=255)

                     gcgttgctgcgttgctgcgttgctGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACg                                                                  >  1:3602425/1‑151 (MQ=255)

                      cgttgctgcgttggtgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACgg                                                                 <  2:4901963/151‑1 (MQ=255)

                      cgttgctgcgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACgg                                                                 >  1:4422982/1‑151 (MQ=255)

                      cgttgctgcgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACgg                                                                 >  1:3595250/1‑151 (MQ=255)

                       gttgctgcgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACTTAGGCCTTGCGGTGGGAGGTGACggg                                                                >  2:3330208/1‑151 (MQ=255)

                       gttgctgcgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACggg                                                                >  1:4783921/1‑151 (MQ=255)

                          gctgcgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCAt                                                             <  1:1950341/151‑1 (MQ=255)

                          gctgcgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCCTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCAt                                                             <  2:3368764/151‑1 (MQ=255)

                           ctgcgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATg                                                            <  1:5056309/151‑1 (MQ=255)

                             gcgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGa                                                          >  1:4372453/1‑151 (MQ=255)

                              cgttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGAt                                                         >  2:258902/1‑151 (MQ=255)

                               gttgctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATg                                                        >  2:4423064/1‑151 (MQ=255)

                                  gctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGccc                                                     >  2:1950412/1‑151 (MQ=255)

                                   ctgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCg                                                    <  1:3279703/151‑1 (MQ=255)

                                    tgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCCTGGATGCCCGt                                                   >  2:2172335/1‑151 (MQ=255)

                                    tgcgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGt                                                   >  2:2172541/1‑151 (MQ=255)

                                      cgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCa                                                 >  2:3372748/1‑151 (MQ=255)

                                      cgttgctgTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCa                                                 >  1:2286546/1‑151 (MQ=255)

                                       gttgctgttgctgttgctgttgctgttgctgttgctgttgctgttgctGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCaa                                                <  2:4144875/151‑1 (MQ=255)

                                        ttgctgttgttgttgctgttgctgttgctgtggctgtcgctgttgctgTTGATCTTGATCTTGATCTTGATCGTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAg                                               <  2:4100775/151‑1 (MQ=17)

                                         tgctgttgctgttgctgttgctgttgctgttgctgttgctgttgctgtTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAgc                                              <  1:2066675/151‑1 (MQ=255)

                                          gctgttgctgttgctgttgctgttgctgttgctgttgctgttgctgttGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGGGACGGGCATGGATGCCCGTCAAgcg                                             <  2:2626069/151‑1 (MQ=255)

                                                   gttgctgttgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGcccc                                   <  2:868157/151‑1 (MQ=255)

                                                   gttgctgttgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGcccc                                   <  2:869258/151‑1 (MQ=255)

                                                   gttgctgttgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGcccc                                   <  1:1008939/151‑1 (MQ=255)

                                                    ttgctgttgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCa                                  <  1:3307286/151‑1 (MQ=255)

                                                    ttgctgttgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCa                                  <  1:1284790/151‑1 (MQ=255)

                                                      gctgttgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCagg                                <  2:1961597/151‑3 (MQ=255)

                                                        tgttgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCaggat                              >  2:4476846/1‑147 (MQ=14)

                                                         gttgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCca‑ggatg                            >  2:3846463/1‑151 (MQ=14)

                                                           tgctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATggg                          >  1:12531/1‑151 (MQ=11)

                                                            gctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATgggg                         >  1:3226432/1‑151 (MQ=11)

                                                             ctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGc                        <  1:3091982/151‑1 (MQ=11)

                                                             ctgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGc                        <  1:974281/151‑1 (MQ=11)

                                                              tgttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGcc                       <  1:1232981/151‑1 (MQ=11)

                                                               gttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCt                      <  1:3362122/151‑1 (MQ=11)

                                                               gttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCt                      >  2:4121850/1‑151 (MQ=14)

                                                               gttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCt                      >  2:4122204/1‑151 (MQ=11)

                                                               gttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCt                      >  2:1694866/1‑151 (MQ=11)

                                                                ttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATgggg                         <  2:3479408/147‑1 (MQ=11)

                                                                ttgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTg                     >  2:2151487/1‑151 (MQ=11)

                                                                 tgctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGc                    >  2:207222/1‑151 (MQ=14)

                                                                  gctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCa                   <  2:4713668/151‑1 (MQ=11)

                                                                   ctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCTTTGCGGAGGGAGGTGCCGGGCATGGATGGCCGTCAAGCGCTG‑GGCCAC‑CGGATGGGGTCTGCAg                  >  2:1547216/1‑151 (MQ=14)

                                                                   ctgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAg                  <  1:4584825/151‑1 (MQ=14)

                                                                    tgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAgc                 >  1:2226263/1‑151 (MQ=14)

                                                                    tgttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAgc                 <  1:3590834/151‑1 (MQ=14)

                                                                     tttgctgttgctgttgctgttgATGTTGATCTTGATCTTGATCTTGATCTTGTTATTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAgcg                <  2:4471433/150‑1 (MQ=11)

                                                                     gttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAgcg                >  1:2745533/1‑151 (MQ=14)

                                                                     gttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAgcg                <  1:624366/151‑1 (MQ=14)

                                                                      ttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGCTGGGGCCTGCAgcgc               >  1:1002232/1‑151 (MQ=14)

                                                                      ttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAgcgc               >  1:4100886/1‑151 (MQ=14)

                                                                      ttgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAgcgc               >  2:2475178/1‑151 (MQ=14)

                                                                       tgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGcgc‑g             >  1:4226094/1‑151 (MQ=14)

                                                                       tgctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGcgc‑g             >  2:2746702/1‑151 (MQ=14)

                                                                         ctgttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGcgc‑ggt           >  1:3877911/1‑149 (MQ=14)

                                                                           gttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGcgc‑ggtcc         <  1:4423064/151‑5 (MQ=11)

                                                                           gttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGcgc‑ggtcc         >  2:3317850/1‑147 (MQ=11)

                                                                           gttgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGcgc‑ggtcc         >  2:244670/1‑147 (MQ=11)

                                                                             tgctgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGcgc‑ggtcctc       >  1:5215087/1‑145 (MQ=11)

                                                                                tgttgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGCCGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCg     <  2:2230974/151‑1 (MQ=11)

                                                                                tgttgctgttgATCTTGACCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCg     >  1:3064706/1‑151 (MQ=11)

                                                                                   tgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGa  <  1:1185579/151‑1 (MQ=1)

                                                                                   tgctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGa  >  2:1711976/1‑151 (MQ=1)

                                                                                    gctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATg                                                        <  1:384685/98‑1 (MQ=255)

                                                                                    gctgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGTAGGCCTTGCGGAGGGAGGTGACGGGCATGGATg                                                        >  2:384685/1‑98 (MQ=255)

AAACTGTACTGTGCTGTTGCTGCGTTGCTGCGTTGCTGCGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGC‑GTACTCCCGGGA  >  CP009974/418245‑418479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`