BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	2,947,371	C→T	A77T (GCT→ACT)	RPPX_13125 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	2,947,371	0	C	T	92.7%	946.4 / 36.3	290	A77T (GCT→ACT)	RPPX_13125	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (10/11); new base T (136/131); total (147/143)
Fisher's exact test for biased strand distribution p-value = 8.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 293 total aligned reads displayed.

GGGAGAAAAACCTGTACAGCTCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGCGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTCGGCGA  >  CP009974/2947221‑2947517

gggAGAAAAACCTGTACAGCTCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAgc                                                                                                                                                    >  1:4712074/1‑151 (MQ=255)

   agaAAAACCTGTACAGCTCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCCCAGGCAAATTCATGCACGGTTTCGGTCTTGCCCAGCCGCGCCAGTGCGGCGATCTGACGATGCTCGCTGTGGTAATGGCCGTCGCCAgtgcg                                                                                                                                                 >  2:106571/1‑151 (MQ=255)

      aaaaCCTGTACAGCTCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGCGCGCCa                                                                                                                                              <  1:487641/151‑1 (MQ=255)

            tGTACAGCTCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGCGCGCCAGCCcct                                                                                                                                        <  1:1560346/151‑1 (MQ=255)

               aCAGCTCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCcctgac                                                                                                                                     >  2:3275714/1‑151 (MQ=255)

                 aGCTCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCcctgacct                                                                                                                                   <  2:1636852/151‑1 (MQ=255)

                    tCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCctgacctgac                                                                                                                                >  1:3611158/1‑151 (MQ=255)

                     cGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCtgacctgacc                                                                                                                               <  2:2025591/151‑1 (MQ=255)

                      ggATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCg                                                                                                                              <  1:3465813/151‑1 (MQ=255)

                      ggATTTGGAGGCGCACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCg                                                                                                                              <  1:5040346/151‑1 (MQ=255)

                       gATTTGGAGGCGGCCAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGCTAATCGCCGTCGCTAGTACGCCACCCCCCCACCTCACCGt                                                                                                                             >  2:4705928/1‑151 (MQ=255)

                        aTTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGtt                                                                                                                            >  2:1179656/1‑151 (MQ=255)

                        aTTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGtt                                                                                                                            >  2:2352737/1‑151 (MQ=255)

                           tGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTg                                                                                                                         <  1:3381354/151‑1 (MQ=255)

                             gAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGtt                                                                                                                       >  2:3611521/1‑151 (MQ=255)

                             gAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGtt                                                                                                                       >  2:100918/1‑151 (MQ=255)

                               ggCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCg                                                                                                                     <  1:2367056/151‑1 (MQ=255)

                                 cGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCCGCCCCTGACCTGACCGTTCTGTTCGCt                                                                                                                   >  2:4263718/1‑151 (MQ=255)

                                 cGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCt                                                                                                                   >  1:410919/1‑151 (MQ=255)

                                  ggACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTg                                                                                                                  >  1:2762335/1‑151 (MQ=255)

                                  ggACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGCTCTGTTCGCtt                                                                                                                  >  2:3858373/1‑150 (MQ=255)

                                      aGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCt                                                                                                              <  1:5175870/151‑1 (MQ=255)

                                        gCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTgg                                                                                                            >  1:3419963/1‑151 (MQ=255)

                                        gCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTgg                                                                                                            <  2:1999266/151‑1 (MQ=255)

                                        gCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTgg                                                                                                            >  1:5001641/1‑151 (MQ=255)

                                        gCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTgg                                                                                                            <  1:2745830/151‑1 (MQ=255)

                                          cAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGcc                                                                                                          <  1:2079331/151‑1 (MQ=255)

                                           aGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCg                                                                                                         >  1:4236676/1‑151 (MQ=255)

                                             ttATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGaa                                                                                                       >  2:2284560/1‑151 (MQ=255)

                                               aTCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAAc                                                                                                     >  1:2481621/1‑151 (MQ=255)

                                                  tcACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTACTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGa                                                                                                  <  2:4854426/151‑1 (MQ=255)

                                                    aCCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATa                                                                                                >  1:2826073/1‑151 (MQ=255)

                                                       gATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGc                                                                                             >  1:1175818/1‑151 (MQ=255)

                                                       gATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGc                                                                                             >  1:3678622/1‑151 (MQ=255)

                                                            cacaGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGACACCGATACGCcgcgc                                                                                        >  2:3942769/1‑150 (MQ=255)

                                                              caGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGAcc                                                                                      <  1:2593918/151‑1 (MQ=255)

                                                                ggCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCAc                                                                                    >  1:387705/1‑151 (MQ=255)

                                                                ggCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCAc                                                                                    <  1:3175015/151‑1 (MQ=255)

                                                                 gCAAATTCATGCACGGTTTCGGTTGTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACt                                                                                   <  1:4290206/151‑1 (MQ=255)

                                                                     aTTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATg                                                                               <  2:650296/151‑1 (MQ=255)

                                                                        cATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGccc                                                                            >  2:1419811/1‑150 (MQ=255)

                                                                        cATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCa                                                                            >  2:3105881/1‑151 (MQ=255)

                                                                        cATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCa                                                                            <  2:4636397/151‑1 (MQ=255)

                                                                         aTGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAg                                                                           <  1:377139/151‑1 (MQ=255)

                                                                           gCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAgcg                                                                         <  1:4355889/151‑1 (MQ=255)

                                                                             aCGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAgcgcc                                                                       >  2:2495745/1‑150 (MQ=255)

                                                                             aCGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGca                                                                       >  1:1971133/1‑151 (MQ=255)

                                                                             aCGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGca                                                                       <  1:690305/151‑1 (MQ=255)

                                                                               tgtttcggtttTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTTTGGTAATGTCCGTCGCTAGTGCGCCAGCCCCTTACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGcacc                                                                     >  2:837158/2‑151 (MQ=255)

                                                                                gtttcggtttTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGcacca                                                                    <  1:2304904/151‑1 (MQ=255)

                                                                                 tttcggtttTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGcaccac                                                                   <  1:3512520/151‑1 (MQ=255)

                                                                                    cggtttTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCt                                                                <  1:1416386/151‑1 (MQ=255)

                                                                                     ggtttTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTc                                                               <  1:834206/151‑1 (MQ=255)

                                                                                         ttGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATg                                                           >  1:4543743/1‑151 (MQ=255)

                                                                                           gCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAg                                                         <  1:1838599/151‑1 (MQ=255)

                                                                                           gCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAg                                                         <  1:251861/151‑1 (MQ=255)

                                                                                             ccAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGc                                                       <  2:617973/151‑1 (MQ=255)

                                                                                             ccAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGGTCGCTGCCCTGGCCGAAAGCGATACGCTGCGACCACTCATGCGACAGCACTAACATCGATGAggg                                                       >  2:4393613/1‑150 (MQ=255)

                                                                                             ccAGCCGCCCCAGTGCGGCGATCTGCCGATGCTCGCCTTGGTAATGGCCGGCGCTACTGCGCTAGCCCCCGACCTGACGGTTCTGTTCGCGCTCCTGGCCGAAACCCCTACGCTGCGACCCCCCATGCCAGCGCACCCCGCTCGATGAgcc                                                       >  2:3018014/1‑149 (MQ=255)

                                                                                              cAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCa                                                      <  2:1779993/151‑1 (MQ=255)

                                                                                                gCCGCGCCAGTGCGGCGATCTGCCGGTGCTCTCTGTGGTACTGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAAt                                                    <  2:4457905/151‑1 (MQ=255)

                                                                                                gCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAAt                                                    >  1:2334113/1‑151 (MQ=255)

                                                                                                    ggcCGGTGCGGCGATCTGCGGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCTCTCATGCCAGCGCACCACGCTCGATGAGGCAATGCcg                                                <  2:2751051/150‑1 (MQ=255)

                                                                                                    cgcCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGCGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcg                                                >  1:1007976/1‑151 (MQ=255)

                                                                                                     gcCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCCGCGCACCACGCTCGATGAGGCAATGAcgg                                               >  2:3813685/1‑151 (MQ=255)

                                                                                                     gcCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCCATGAcgg                                               >  2:4422822/1‑151 (MQ=255)

                                                                                                     gcCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcgg                                               >  2:3159742/1‑151 (MQ=255)

                                                                                                      ccAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcggc                                              <  1:3258829/151‑1 (MQ=255)

                                                                                                       cAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcggcg                                             >  1:1903541/1‑151 (MQ=255)

                                                                                                       cAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcggcg                                             >  1:5224804/1‑151 (MQ=255)

                                                                                                       cAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGCGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcggcg                                             >  1:2272107/1‑151 (MQ=255)

                                                                                                        aGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcggcgg                                            <  1:1049516/151‑1 (MQ=255)

                                                                                                        aGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcggcgg                                            >  2:5114602/1‑151 (MQ=255)

                                                                                                           gcggcgATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGAcggcggcgg                                         >  1:4809392/1‑151 (MQ=255)

                                                                                                                gATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCa                                    >  2:2093514/1‑151 (MQ=255)

                                                                                                                  tCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATc                                  <  1:2201451/151‑1 (MQ=255)

                                                                                                                   cTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATcc                                 <  1:291844/151‑1 (MQ=255)

                                                                                                                    tGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTACGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCCTGCCAGCGCACCACGCTCGATGAGCCAATGACGGCGTCGGTGCCCTccc                                >  1:4046534/1‑150 (MQ=255)

                                                                                                                    tGCCGATGCGCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCa                                <  2:5234278/151‑1 (MQ=255)

                                                                                                                     gCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCAc                               >  2:1309741/1‑151 (MQ=255)

                                                                                                                        gATGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCt                            >  2:3477881/1‑151 (MQ=255)

                                                                                                                         aTGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCAcccgc                           >  2:1490108/1‑149 (MQ=255)

                                                                                                                          tGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCa                          <  1:4902691/151‑1 (MQ=255)

                                                                                                                          tGCTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCa                          >  1:5236001/1‑151 (MQ=255)

                                                                                                                            cTCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATg                        >  2:2644690/1‑151 (MQ=255)

                                                                                                                             tCGGTGTGGTAAGGGCCGGCGCTAGTGCGCCAGCCCCTGCCCGGACCGTGCTGTTCGCTGCGCTGGCCGAAAGCGATACGCTGCGACCGCTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATgc                       <  2:2939653/151‑1 (MQ=255)

                                                                                                                             tCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATgc                       <  1:2976855/151‑1 (MQ=255)

                                                                                                                             tCGCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATgc                       <  1:1310676/151‑1 (MQ=255)

                                                                                                                               gCTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATgcgc                     <  2:182840/151‑1 (MQ=255)

                                                                                                                                cTGTGGTAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCa                    >  1:4843254/1‑151 (MQ=255)

                                                                                                                                      tAATGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTgg              >  1:718990/1‑151 (MQ=255)

                                                                                                                                        aTGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACTGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGa            >  1:2404672/1‑151 (MQ=255)

                                                                                                                                         tGGCCGTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCCGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAg           >  2:356323/1‑151 (MQ=255)

                                                                                                                                             cGTCGCTAGTGCGCCAGCCCCTGACCTGGCCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCGCTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTc       <  2:4556428/151‑1 (MQ=255)

                                                                                                                                              gTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGGTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTCg      <  2:4001505/151‑1 (MQ=255)

                                                                                                                                              gTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTCg      <  1:1711234/151‑1 (MQ=255)

                                                                                                                                              gTCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTCg      <  2:1968532/151‑1 (MQ=255)

                                                                                                                                               tCGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTCgg     <  1:4664416/151‑1 (MQ=255)

                                                                                                                                                cGCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTCGGc    <  2:3419963/151‑1 (MQ=255)

                                                                                                                                                 gCTAGTGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTCGGCg   >  1:3327608/1‑151 (MQ=255)

GGGAGAAAAACCTGTACAGCTCGGATTTGGAGGCGGACAGGCCAGTTATCTCACCGATGTCACAGGCAAATTCATGCACGGTTTCGGTTTTGCCCAGCCGCGCCAGTGCGGCGATCTGCCGATGCTCGCTGTGGTAATGGCCGTCGCTAGCGCGCCAGCCCCTGACCTGACCGTTCTGTTCGCTGCCCTGGCCGAAACCGATACGCTGCGACCACTCATGCCAGCGCACCACGCTCGATGAGGCAATGACGGCGGCGGTGTCATCCACCCTCATGCGCAACTTGGGAGTGTCGGCGA  >  CP009974/2947221‑2947517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`