| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,090,679 | C→T | intergenic (+11/+128) | RPPX_13755 → / ← RPPX_13760 | gamma‑glutamyltranspeptidase/chemotaxis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,090,679 | 0 | C | T | 99.1% | 844.3 / NA | 229 | intergenic (+11/+128) | RPPX_13755/RPPX_13760 | gamma‑glutamyltranspeptidase/chemotaxis protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (131/96); minor base G (2/0); total (133/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
GAGCTGAAGAAGATGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGCACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGACGCGGAATTGGCTG > CP009974/3090531‑3090825 | cTGAAGAAGATGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGcc < 2:1482279/151‑1 (MQ=255) tGAAGAAGATGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCg > 2:2847939/1‑151 (MQ=255) gaagaaGATGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCgg > 2:1901567/1‑151 (MQ=255) gaagaaGATGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCgg > 2:5189818/1‑151 (MQ=255) gaagaaGATGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACACACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCgg < 2:4903364/151‑1 (MQ=255) agaagaTGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCgggg > 2:3726326/1‑150 (MQ=255) agaTGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAggg < 1:1076181/151‑1 (MQ=255) agaTGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAggg < 1:2780454/151‑1 (MQ=255) gggCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCttt < 1:5089717/151‑1 (MQ=255) ctctgtgCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGcc < 1:4800449/148‑1 (MQ=255) naTGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGccc > 1:2631901/2‑151 (MQ=255) gtgCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCcctcc > 2:5206991/1‑151 (MQ=255) gtgCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCcctcc < 1:4376641/151‑1 (MQ=255) ggggtGGAGGACCGGGGCGGGGAGGTGGGCGAGAGCCGGGCGATGCGCGTGGATGGGGCGAAGCTCGAGGCCGCTTGCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCcctcc < 2:3557243/147‑1 (MQ=255) tgCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCcctcct < 2:526625/151‑1 (MQ=255) tgCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCcctcct > 1:2757357/1‑151 (MQ=255) tGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATc < 1:3989728/151‑1 (MQ=255) tGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGCGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATc > 2:4986897/1‑151 (MQ=255) gaggaCCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATcgc > 2:603173/1‑151 (MQ=255) gaggaCCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATcgc < 1:3003550/151‑1 (MQ=255) aggaCCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATcgcg > 1:80757/1‑151 (MQ=255) ggaCCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGa > 1:3822160/1‑151 (MQ=255) gaCCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGac > 2:276083/1‑151 (MQ=255) gaCCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGCGCTTTGCCCTCCTATCGAGac > 2:4785286/1‑151 (MQ=255) ccAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGacac < 2:1238502/151‑1 (MQ=255) ccAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGCGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGacac > 1:4869415/1‑151 (MQ=255) gggCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAg < 1:5112385/151‑1 (MQ=255) tGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCg < 1:1537052/151‑1 (MQ=255) gggAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGGGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGc < 1:100900/151‑1 (MQ=255) gggAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGc < 1:3473251/151‑1 (MQ=255) agaTGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTcc < 1:1630133/151‑1 (MQ=255) gaTGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTccc < 2:3867091/151‑1 (MQ=255) aTGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACACGGCCGCTCCCa > 2:5110135/1‑151 (MQ=255) aTGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCa > 2:1215971/1‑151 (MQ=255) aTGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCa > 2:1036556/1‑151 (MQ=255) ggggCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCAc < 2:1559804/150‑1 (MQ=255) gggCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGCGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCCCGACACAACGCCGCTCCCAcc > 2:1281470/1‑150 (MQ=255) ggCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGa > 1:4960776/1‑151 (MQ=255) gCGACAGCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGCCCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAg < 2:2190702/151‑1 (MQ=255) cGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGCCACAAGGCCGCTCCCCCGAgg > 2:5182098/1‑151 (MQ=255) cGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAgg > 2:3771251/1‑151 (MQ=255) gACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGa > 2:1074041/1‑151 (MQ=255) cATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGAcc < 1:581201/151‑1 (MQ=255) cATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGAcc < 2:237674/151‑1 (MQ=255) aTCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCt > 1:643668/1‑151 (MQ=255) aTCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCt < 1:1297881/151‑1 (MQ=255) aGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGt < 2:3427849/151‑1 (MQ=255) aGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGt < 2:944150/151‑1 (MQ=255) aTCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTc > 1:2803725/1‑151 (MQ=255) tCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCg > 2:1848513/1‑151 (MQ=255) ccGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGa < 1:2615159/151‑1 (MQ=255) ccGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGa > 2:1328907/1‑151 (MQ=255) gATGTGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAatat < 2:4739171/151‑1 (MQ=255) gtGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATg < 1:5047110/150‑1 (MQ=255) aTGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATg < 1:5230748/151‑1 (MQ=255) ggggCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATggg > 1:344446/1‑151 (MQ=255) gggCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGa < 1:4519759/151‑1 (MQ=255) gCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGc < 2:5077571/151‑1 (MQ=255) gCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCGCCTATCGCGACACACGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGc > 2:4985368/1‑151 (MQ=255) aaGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGc > 1:4561807/1‑151 (MQ=255) cTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCtt < 1:2095207/151‑1 (MQ=255) ttGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTg < 2:3488015/151‑1 (MQ=255) tGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGa > 1:591967/1‑151 (MQ=255) gaCCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTc < 2:4599558/151‑1 (MQ=255) gaCCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTc < 2:4288303/151‑1 (MQ=255) cGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTcgcg > 1:5011966/1‑151 (MQ=255) gCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGa > 2:626746/1‑151 (MQ=255) cTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGaa > 2:2627759/1‑151 (MQ=255) ttCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATTTGGGCGCGGCCTTGAGTAGCGaca > 1:2509589/1‑149 (MQ=255) ttCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGaaa > 1:2510185/1‑151 (MQ=255) tCCGCCCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAg < 1:3902382/151‑1 (MQ=255) ccGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAgg > 2:3952257/1‑151 (MQ=255) aCCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGcc > 1:1962551/1‑151 (MQ=255) aCGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCaa > 2:2264558/1‑151 (MQ=255) cgtgggcgtgggGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCaaa > 2:4213101/1‑151 (MQ=255) gtgggcgtgggGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAg > 1:2259589/1‑151 (MQ=255) gtgggcgtgggGTGGGCATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAg < 2:3094348/151‑1 (MQ=255) tgggcgtgggGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGc > 1:1746696/1‑151 (MQ=255) gggcgtgggGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCg > 1:2842618/1‑151 (MQ=255) ggcgtgggGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCgg > 1:752127/1‑151 (MQ=255) ggcgtgggGTGGGGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGAGGTCTTGAGTCGCGAACGGGACGCACAGCgg > 2:4465417/1‑151 (MQ=39) gtggggtgggGATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGccc > 1:136223/1‑151 (MQ=255) gggtggtgAGGCTCGTCAAGTGGTGCGTGGGTGTTCGCAGGGAGGGCTTTGCCCGCCTATGGCGAGGCAAGGCGGCTCCTACGGGGACCTGGGTACGTCGATCAATATGGGAGCAGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAg < 2:1515424/151‑1 (MQ=19) gtggggATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGt > 1:3703771/1‑151 (MQ=255) gggATGATCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTcc > 2:2724144/1‑151 (MQ=255) gatgatCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGCGCCGCGCAGCGGCCCCCGGTTCCaa > 2:3257124/1‑151 (MQ=255) tgatCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACg < 1:721755/151‑1 (MQ=255) tgatCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACg > 1:1731086/1‑151 (MQ=255) tCGTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGAACAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTc > 1:2602136/1‑151 (MQ=255) gTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCAAACCGGACGCAGGTGCCCACGGTCAg > 2:1272548/1‑151 (MQ=38) gTCAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAg > 1:2225525/1‑151 (MQ=255) cAAGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGAc < 1:3317755/151‑1 (MQ=255) aaGTAGTGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGAcg > 2:954718/1‑151 (MQ=255) agtagtGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGAcgc > 1:5179995/1‑151 (MQ=255) gtagtGCCTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGAcgcg > 1:5074544/1‑151 (MQ=255) gtGCCTGTGAGTCCGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGACGCGGaa < 1:4703464/151‑1 (MQ=255) ccTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGACGCGGAATTg > 1:187376/1‑151 (MQ=255) ccTGTGAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGACGCGGAATTg < 2:816665/151‑1 (MQ=255) tgtgAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGACGCGGAATTGGc > 1:3188937/1‑151 (MQ=255) gtgAGTACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGATGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGACGCGGAATTGGCt > 1:1129573/1‑151 (MQ=255) | GAGCTGAAGAAGATGGGCTATGTGCTGGAGGACCAGGGCTGGGAGATGGGCGACATCCAGGCGATCCGCGTCGATGGGGCGAAGCTTGAGACCGCTTCCGACCCACGTGGGCGTGGGGTGGGGATGATCGTCAAGTAGTGCCTGTGAGCACGCCGGGAGGGCTTTGCCCTCCTATCGCGACACAAGGCCGCTCCCACGAGGACCTGCGTACGTCGATCAATATGGGAGCGGCCTTGAGTCGCGAAAGGGCCGCAAAGCGGCCCCAGGTTCCAACGGTCAGACGCGGAATTGGCTG > CP009974/3090531‑3090825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |