| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,523,212 | C→T | A110V (GCC→GTC) | RPPX_15735 → | nucleoprotein/polynucleotide‑associated enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,523,212 | 0 | C | T | 90.0% | 810.0 / 50.7 | 262 | A110V (GCC→GTC) | RPPX_15735 | nucleoprotein/polynucleotide‑associated enzyme |
| Reads supporting (aligned to +/- strand): ref base C (9/17); new base T (130/105); total (140/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.11e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 262 total aligned reads displayed.
CAGGAACTGAACCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACAGCCATG > CP009974/3523064‑3523358 | cAGGAACTGAACCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCg < 2:3304095/151‑1 (MQ=255) gAACTGAACCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCa < 1:1571921/151‑1 (MQ=255) aCTGAACCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAAc < 2:2738015/151‑1 (MQ=255) aCTGAACCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAAc < 1:270507/151‑1 (MQ=255) tGAACCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGc > 2:3649522/1‑151 (MQ=255) gAACCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGcc < 1:4104671/151‑1 (MQ=255) aaCCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAACGccc > 2:217784/1‑151 (MQ=255) ccGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTg < 1:1347697/151‑1 (MQ=255) cGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGa > 2:579433/1‑151 (MQ=255) ccAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATg < 1:1038801/151‑1 (MQ=255) agcagcagGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCg > 2:635604/1‑151 (MQ=255) cagcagGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTa > 1:91113/1‑151 (MQ=255) agcagGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTAc < 1:4812182/151‑1 (MQ=255) gcagGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTAcc > 1:3642199/1‑151 (MQ=255) cagGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCa < 1:4223597/151‑1 (MQ=255) cagGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCa > 2:5083925/1‑151 (MQ=255) aaGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGa < 2:2391066/151‑1 (MQ=255) aGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAg > 1:1257383/1‑151 (MQ=255) ggCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTgcgc > 2:3184259/1‑151 (MQ=255) gAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACg > 1:337201/1‑151 (MQ=255) gAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAACGACAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACg > 2:3769030/1‑151 (MQ=255) aGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGgcgc > 2:2849808/1‑151 (MQ=255) gAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGgcgcg < 1:965428/151‑1 (MQ=255) aGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCt > 1:309060/1‑151 (MQ=255) gCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTgg < 1:2365371/151‑1 (MQ=255) ccGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGcc > 2:3143311/1‑151 (MQ=255) cGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTCAGCAACGGCGCGCTGGCCg > 2:4317850/1‑151 (MQ=255) gTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGt < 1:1932837/151‑1 (MQ=255) tGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCGGGCCGTg > 2:2093898/1‑151 (MQ=255) ccGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGt < 2:3993802/151‑1 (MQ=255) ccGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGt > 1:3482545/1‑151 (MQ=255) cgcgCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTa > 1:2533034/1‑151 (MQ=255) cgcgCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTa < 2:4735964/151‑1 (MQ=255) cAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGccc > 2:3557629/1‑151 (MQ=255) cAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGccc < 2:562459/151‑1 (MQ=255) aGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCa < 1:559850/151‑1 (MQ=255) gTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATg < 1:2095302/151‑1 (MQ=255) cAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGcc > 2:3901654/1‑151 (MQ=255) cAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCCGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGcc < 1:4402844/151‑1 (MQ=255) tGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTa > 2:1476592/1‑151 (MQ=255) tGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTa > 2:204341/1‑151 (MQ=255) agATCGAACCCACTCGCCTGCCCAAGCTGCGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTa < 1:5016518/150‑1 (MQ=255) aTCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACg < 2:4850106/151‑1 (MQ=255) tCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGa < 2:897339/151‑1 (MQ=255) cGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAg > 2:398203/1‑151 (MQ=255) gAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAgg > 2:2463406/1‑151 (MQ=255) gAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAgg > 2:2319526/1‑151 (MQ=255) ccACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTAt < 1:1996679/151‑1 (MQ=255) cACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATc > 1:17337/1‑151 (MQ=255) cACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATc > 2:1167893/1‑151 (MQ=255) ccTCGCCTGGCCAAGCGGAGCACCGAGGATTACTACGACTTCGTCGACGACAGGAAGGTCAAGCGTATGGTCGTCAACGGCCTGATGCGTGCCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATcc < 2:2171385/150‑1 (MQ=255) cTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATccc < 2:3428162/151‑1 (MQ=255) cTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATccc < 1:49463/151‑1 (MQ=255) cGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTc < 1:5189178/151‑1 (MQ=255) gCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAg > 1:4372818/1‑97 (MQ=255) gCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCg > 1:3989614/1‑151 (MQ=255) ccTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGt > 1:3678969/1‑151 (MQ=255) cccAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAgg > 2:763213/1‑151 (MQ=255) aGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGgccgc > 1:4022670/1‑151 (MQ=255) cTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCt > 1:401697/1‑151 (MQ=255) tGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCtt > 1:1142098/1‑151 (MQ=255) gCACCGAGGAGTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGaa > 1:1802807/1‑151 (MQ=255) gAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATcc < 1:2488949/151‑1 (MQ=255) aGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCa > 2:453401/1‑151 (MQ=255) gATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAgg < 1:2858035/151‑1 (MQ=255) aTTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGa < 1:375883/151‑1 (MQ=255) ttACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAg > 1:4876662/1‑151 (MQ=255) tactacAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAgc > 2:3783499/1‑151 (MQ=255) actacAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGGgcg > 1:2265455/1‑151 (MQ=255) acAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGa < 2:4037132/151‑1 (MQ=255) cAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGAc < 1:3143311/151‑1 (MQ=255) aaCTTCGTCGACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGAcc < 2:2716626/151‑1 (MQ=255) ttCGTCGCCGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTg < 1:3252461/151‑1 (MQ=255) tcgtcgACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTgg < 1:83297/151‑1 (MQ=255) cgtcgACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTCATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGc > 2:3075825/1‑151 (MQ=255) gtcgACGACAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGcc < 1:2885688/151‑1 (MQ=255) cgacgaCAAGAAGTTCAAGCGTATTGACGTCACCGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGCTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGCGGCCCCCTTGATGATCTAGGAGCGCGACCCTGTCCGt > 2:4472308/1‑151 (MQ=255) gacgacAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTa > 1:1841841/1‑151 (MQ=255) acgacAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTAt < 2:2576535/151‑1 (MQ=255) acgacAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTAt > 2:690129/1‑151 (MQ=255) gacAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTc > 1:1648622/1‑151 (MQ=255) acAAGAAGGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTct < 1:2307521/151‑1 (MQ=255) agaagGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTctgct > 1:2505094/1‑151 (MQ=255) agaagGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTctgct > 1:2189620/1‑151 (MQ=255) gaagGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTctgctg > 2:1311946/1‑151 (MQ=255) gggTCAAGCGTATTGTGGTCAACGCCCTGATGCGTACCAAGCTGAGCAGCGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTgctgct < 2:2301907/150‑1 (MQ=255) agGTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTgctgct < 1:4663377/151‑1 (MQ=255) ggTCAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTc > 2:1356798/1‑151 (MQ=255) ggTCAAGCGTATTGTCGTCAACGCCCTGATGCGGACCAAGTTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTc < 2:3175022/151‑1 (MQ=255) ggTCAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTc < 2:1920734/151‑1 (MQ=255) cAAGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAAc < 2:1912959/151‑1 (MQ=255) aaGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACa > 1:213773/1‑151 (MQ=255) aGCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACAg > 2:1772665/1‑151 (MQ=255) gCGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACAGc > 2:1557835/1‑151 (MQ=255) cGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACAGcc < 2:1997722/151‑1 (MQ=255) cGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACAGcc < 2:1746429/151‑1 (MQ=255) cGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACAGcc < 1:5144768/151‑1 (MQ=255) cGTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCGCAACAGcc > 2:302890/1‑151 (MQ=255) gTATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCtgctgc < 2:4058330/141‑1 (MQ=255) tATTGTCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACAGCCAt > 2:3475176/1‑151 (MQ=255) | CAGGAACTGAACCGCCAGCAGCAGGAAAAGGCCGAGCAGAAGGCCCGTGCCGCGCAGGTCAAGCAACTGATCGAAGCCACTCGCCTGCCCAAGCTGAGCACCGAGGATTACTACAACTTCGTCGACGACAAGAAGGTCAAGCGTATTGCCGTCAACGCCCTGATGCGTACCAAGCTGAGCAACGGCGCGCTGGCCGTGGTAGCCCATGCCGGTGGTTACGAGGTTATCCCTCGTGAGGCCGCCTTGAAGATCCAGGAGCGCGACCCTGGCCGTATTCTGCTGCTCAACAGCCATG > CP009974/3523064‑3523358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |