Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 3,721,374 A→G intergenic (+316/+51) RPPX_16570 → / ← RPPX_16575 glutathione S‑transferase/glutaredoxin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099743,721,3740AG90.8% 311.3 / 18.3 119intergenic (+316/+51)RPPX_16570/RPPX_16575glutathione S‑transferase/glutaredoxin
Reads supporting (aligned to +/- strand):  ref base A (7/4);  new base G (67/41);  total (74/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 122 total aligned reads displayed.

TTAGGGCCTGGCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGC  >  CP009974/3721228‑3721521
                                                                                                                                                  |                                                                                                                                                   
ttAGGGCCTGGCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGc                                                                                                                                                 <  1:1948530/151‑1 (MQ=18)
ttAGGGCCTGGCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGc                                                                                                                                                 >  2:1747119/1‑151 (MQ=18)
ttAGGGCCTGGCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGc                                                                                                                                                 <  1:1948511/151‑1 (MQ=18)
 tAGGGCCTGGCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTCCCACCCACCGCGGTGcc                                                                                                                                                >  2:1109731/1‑151 (MQ=12)
    ggCCTGGCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGc                                                                                                                                             >  1:860130/1‑151 (MQ=17)
       cTGGCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTc                                                                                                                                          >  1:960831/1‑151 (MQ=17)
          gCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTcgcg                                                                                                                                       >  1:3801715/1‑151 (MQ=14)
            ttGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCggg                                                                                                                                     >  1:95672/1‑151 (MQ=14)
                                                                    tGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTGAGATGGGGGCAAACCGCTCa                                                                             >  1:1000750/1‑151 (MQ=9)
                                                                      ttttCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATc                                                                           <  2:1990429/151‑1 (MQ=32)
                                                                       tttCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATcc                                                                          <  1:2418247/151‑1 (MQ=18)
                                                                        ttCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCa                                                                         >  2:1905159/1‑151 (MQ=33)
                                                                           cAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGt                                                                      <  1:30010/151‑1 (MQ=25)
                                                                           cAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGt                                                                      <  2:2579149/151‑1 (MQ=25)
                                                                           cAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGt                                                                      <  2:3949253/151‑1 (MQ=25)
                                                                            atgcgcTTGTGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTa                                                                     <  1:1907452/149‑1 (MQ=255)
                                                                              gggcTTGCGAAATAGTTGTGGGCGCGGGAGTGCCCATGAACACGGGCGCAGACCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAg                                                                   <  1:495577/149‑1 (MQ=14)
                                                                              gcgcTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAg                                                                   <  1:15085/151‑1 (MQ=255)
                                                                               cgcTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGc                                                                  <  2:4697931/151‑1 (MQ=255)
                                                                                gcTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCg                                                                 <  1:4565303/151‑1 (MQ=255)
                                                                                gcTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCg                                                                 >  1:2607354/1‑151 (MQ=255)
                                                                                  ttGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCgat                                                               >  1:5091333/1‑151 (MQ=255)
                                                                                  ttGCGCAATCCTTGTGGGAGCGGGCGTGCACGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCgat                                                               <  1:1218272/151‑1 (MQ=255)
                                                                                   tGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCgatg                                                              <  1:466210/151‑1 (MQ=255)
                                                                                    gcgcAGTCCTTGTGGGCGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCgatga                                                             <  2:1473082/151‑1 (MQ=255)
                                                                                      gcAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGGTGATc                                                           >  1:446898/1‑151 (MQ=255)
                                                                                        aaTCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCCGCGTCAGTCAGATGGCGGCAAACCCCTCACCCAGGTAAGCGGTGATccc                                                         >  2:3211119/1‑149 (MQ=14)
                                                                                        aaTCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCAGCAGCGCCAGACAGATGGCGGCAAACCGCTCAGCCAGGTAAGCgatgctgcc                                                         >  1:2790865/1‑146 (MQ=14)
                                                                                         aTCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGcc                                                        >  2:960081/1‑151 (MQ=255)
                                                                                         aTCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAACCGACGATCGcc                                                        >  2:2941190/1‑151 (MQ=255)
                                                                                          tCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCt                                                       <  1:5211625/151‑1 (MQ=255)
                                                                                          tCCGTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCt                                                       <  2:5128807/151‑1 (MQ=255)
                                                                                           ccTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCtt                                                      >  1:2075177/1‑151 (MQ=255)
                                                                                           ccTTGTGGGAGCCGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCtt                                                      <  1:3437322/151‑1 (MQ=255)
                                                                                            cTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTg                                                     >  1:532283/1‑151 (MQ=255)
                                                                                              tgtgGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTgca                                                   >  2:4294860/1‑149 (MQ=255)
                                                                                               gtgGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCAt                                                                            <  2:3983936/125‑1 (MQ=17)
                                                                                               gtgGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCAt                                                                            >  1:3983936/1‑125 (MQ=32)
                                                                                                tgGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACt                                                 <  1:4814624/151‑1 (MQ=255)
                                                                                                tgGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACt                                                 >  1:1376290/1‑151 (MQ=255)
                                                                                                 gggAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTc                                                >  1:2630243/1‑151 (MQ=255)
                                                                                                   gggggggCGTGCGCGCGAGCGGGGGCGCAGCCCGGGCGAGCCACCGCGGTGCCGGCTTCGTGGGCTCGCCCGCTGCCACAAGGGATCTGCCGCGTCAGTCAGAGGGCGGCAAACCGCTCATCCAGGTAAGCGATGAGCGGCTTGGACTCAt                                              <  2:4708636/147‑1 (MQ=255)
                                                                                                   gAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCAt                                              <  2:2803774/151‑1 (MQ=255)
                                                                                                    aGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGGCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATa                                             >  2:4266318/1‑151 (MQ=255)
                                                                                                      cGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACa                                           <  2:2981893/151‑1 (MQ=255)
                                                                                                      cGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACa                                           >  2:3154538/1‑151 (MQ=255)
                                                                                                       gggCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACAt                                          <  1:4063039/151‑1 (MQ=255)
                                                                                                       gggCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACAt                                          >  1:2589280/1‑151 (MQ=255)
                                                                                                       gggCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACAt                                          >  2:1066923/1‑151 (MQ=255)
                                                                                                       gggCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACAt                                          >  2:1027565/1‑151 (MQ=255)
                                                                                                         gCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCCTGCACTCATACATcc                                        >  2:1589861/1‑151 (MQ=255)
                                                                                                           gTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAg                                      >  1:1339942/1‑151 (MQ=255)
                                                                                                             gCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTGGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGt                                    <  2:2544588/151‑1 (MQ=255)
                                                                                                             gCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCCGGTAAGCGATGATCGCCTTGGACTCATACATCCCggc                                    >  2:2515286/1‑150 (MQ=255)
                                                                                                             gCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGt                                    <  1:3578398/151‑1 (MQ=255)
                                                                                                             gCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGt                                    <  1:1905159/151‑1 (MQ=255)
                                                                                                               ccGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCa                                  >  2:573567/1‑151 (MQ=255)
                                                                                                                cgcgAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCAc                                 <  2:1345137/151‑1 (MQ=255)
                                                                                                                 gcgAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCAcc                                <  1:2380383/151‑1 (MQ=255)
                                                                                                                  cgAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCt                               <  1:3390465/151‑1 (MQ=255)
                                                                                                                  cgAACACGGGCGCAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAGGCGATGATCGCCTTGGACTCGTACACCGCGGTCAccc                               >  2:2617847/1‑150 (MQ=17)
                                                                                                                  caaccacGGGCGCAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCt                               <  1:1227422/147‑1 (MQ=255)
                                                                                                                   gAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCtt                              >  1:4726281/1‑151 (MQ=255)
                                                                                                                   gAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCtt                              <  1:3431341/151‑1 (MQ=255)
                                                                                                                   gAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCAGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCtt                              <  2:2891363/151‑1 (MQ=255)
                                                                                                                    aaCACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTg                             <  2:4939367/151‑1 (MQ=255)
                                                                                                                    aaCACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTg                             >  2:2268058/1‑151 (MQ=255)
                                                                                                                      cacGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGcc                           <  1:2515286/151‑1 (MQ=255)
                                                                                                                      cacGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGcc                           >  1:4920087/1‑151 (MQ=255)
                                                                                                                       acGGGCGCAGCCCGTGCCAACCTCCGCGGAGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAACCCGCTCAGCCAGGTAAGCGATGATCGCCATGGACTCGTACGTCACGGTCACCTTCCCg                          >  2:4716667/1‑151 (MQ=17)
                                                                                                                         gggCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGc                        <  1:2123510/151‑1 (MQ=255)
                                                                                                                           gcgcAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGctt                      >  2:1738341/1‑151 (MQ=255)
                                                                                                                           gcgcAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGctt                      >  1:694685/1‑151 (MQ=255)
                                                                                                                           gcgcAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGctt                      >  1:689380/1‑151 (MQ=255)
                                                                                                                           gcgcAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGctt                      <  1:2394526/151‑1 (MQ=255)
                                                                                                                            cgcAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACACCCACATCACCTTGCCGGctcc                     >  2:2668402/1‑149 (MQ=255)
                                                                                                                             gcAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGcttct                    >  2:1599614/1‑151 (MQ=255)
                                                                                                                             gcAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGcttct                    >  2:4780600/1‑151 (MQ=255)
                                                                                                                             gcAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCCCCTTGGACTCATACATCCAGGTCACCTTGCCGGcttct                    >  1:1835461/1‑151 (MQ=255)
                                                                                                                              cAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGcttctt                   >  2:346688/1‑151 (MQ=255)
                                                                                                                               aGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCttcttc                  >  1:1841099/1‑151 (MQ=255)
                                                                                                                               aGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCttcttc                  >  1:1411256/1‑151 (MQ=255)
                                                                                                                               aGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGCCAAACCGCTCATCCAGGTAAGCGATAATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGCCttcttc                  >  1:2889251/1‑151 (MQ=255)
                                                                                                                                gCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCa                 <  2:239261/151‑1 (MQ=255)
                                                                                                                                gCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCa                 <  1:4817773/151‑1 (MQ=255)
                                                                                                                                 cccGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCaa                >  1:1581663/1‑151 (MQ=255)
                                                                                                                                  ccGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAAt               <  1:3154538/151‑1 (MQ=255)
                                                                                                                                    ctGCCAACCACCCCGGTGCCTGCTTCGCGGGCTCCCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATTGCTCCAAACCGCTCATCCAGGTAAGCGATGTTCGCCTTGGACTCATACATCCCGTTCACCTCGCCGGCCTCTTCAAtac             >  2:1329638/2‑149 (MQ=21)
                                                                                                                                     tGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATgcg            >  1:4936678/1‑151 (MQ=255)
                                                                                                                                       ccAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCa          >  2:4465850/1‑151 (MQ=255)
                                                                                                                                       ccAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCa          <  1:3984373/151‑1 (MQ=255)
                                                                                                                                       ccAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATcc                                        <  2:4202046/121‑1 (MQ=255)
                                                                                                                                       ccAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATcc                                        >  1:4202046/1‑121 (MQ=255)
                                                                                                                                        cAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAg         >  1:4318446/1‑151 (MQ=255)
                                                                                                                                        cAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAg         >  2:119807/1‑151 (MQ=255)
                                                                                                                                         aaCCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAgg        >  1:666288/1‑151 (MQ=255)
                                                                                                                                          accaccGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGc       >  1:159463/1‑151 (MQ=255)
                                                                                                                                           ccaccGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCCGGTGAGCGGGGCTCGGCTTGGGCTCGTACACCCACGCCACCGTGCCGGCCCCTTCATTGCGCGGGCa      >  2:3293358/1‑151 (MQ=14)
                                                                                                                                             accGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATg    >  1:1510431/1‑151 (MQ=255)
                                                                                                                                               cgcgGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGc  >  1:2208646/1‑151 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
TTAGGGCCTGGCTTGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCAGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATCGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGC  >  CP009974/3721228‑3721521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑