Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 4,541,504 C→T L110L (CTG→CTA)  RPPX_20280 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099744,541,5040CT100.0% 918.0 / NA 268L110L (CTG→CTA) RPPX_20280hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (117/151);  total (117/151)

Only 100 of 269 total aligned reads displayed.

CTGGCGCATGTGCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGACAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACATAGCCCGGGCGCAAAGCACGG  >  CP009974/4541354‑4541651
                                                                                                                                                      |                                                                                                                                                   
    ggcATGTGCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGt                                                                                                                                                 <  2:287453/150‑1 (MQ=38)
     gcATGTGCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTa                                                                                                                                                <  1:354413/151‑1 (MQ=38)
       aTGTGCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAgc                                                                                                                                              >  1:243370/1‑151 (MQ=38)
        tgtgCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAgcg                                                                                                                                             <  1:2668445/151‑1 (MQ=255)
         gtgGCGTTGGCGCAGGGCTGCCGAGCCGGTGGTCCGGGCGGTGATGGCGTTGGTCCCCAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAgcgc                                                                                                                                            <  2:3075609/151‑1 (MQ=11)
         gtgCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAgcgc                                                                                                                                            >  2:585052/1‑151 (MQ=38)
         gtgCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAgcgc                                                                                                                                            >  1:391939/1‑151 (MQ=38)
           gCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTc                                                                                                                                          <  1:5139073/151‑1 (MQ=255)
            ccGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCa                                                                                                                                         <  2:3698694/151‑1 (MQ=37)
             cGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCAc                                                                                                                                        <  2:3754201/151‑1 (MQ=255)
              gTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCAcg                                                                                                                                       >  1:1013011/1‑151 (MQ=38)
              gTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCAcg                                                                                                                                       >  1:1596233/1‑151 (MQ=38)
                ttGCGCAGGGCTGCCGCACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCCCTGGCCCGCTAGCTAGCGCTCCcggc                                                                                                                                     >  2:2587788/1‑151 (MQ=11)
                ttGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCAcggc                                                                                                                                     >  1:1050142/1‑151 (MQ=38)
                    gcAGGGCTGCCGGACCGGTGATCCGGGCGGTGATGGCGTTGGTCCACGGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCGCACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCggtg                                                                                                                                 <  2:2290534/151‑1 (MQ=14)
                    gcAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCggtg                                                                                                                                 >  2:265281/1‑151 (MQ=38)
                           tGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGtcc                                                                                                                          >  1:1268347/1‑151 (MQ=38)
                           tGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGtcc                                                                                                                          >  1:295687/1‑151 (MQ=38)
                            gCCGCACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACCCCCAGCCGGGGCTCTGGCCGGATGGGTAGCGCTCGCGACGGTGGTAGtcct                                                                                                                         >  2:2252155/1‑151 (MQ=11)
                               gAACCGGTGATACGGGCGGTTATGGCGGTGGTCTACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGACCGTGCCCTGGCTGGTGGCGGCCCACACCCAGCCAGTGCTCGGGCCGGATAGGTAGCGCTCACTTCGGTGGTAGtccggca                                                                                                                      >  2:1128102/1‑147 (MQ=11)
                               gAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCa                                                                                                                      >  1:3372701/1‑151 (MQ=38)
                                    ggTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGcccc                                                                                                                 >  2:3812280/1‑150 (MQ=255)
                                    ggTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCt                                                                                                                 >  2:1260139/1‑151 (MQ=37)
                                    ggTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCt                                                                                                                 >  1:2216195/1‑151 (MQ=38)
                                     gTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCtt                                                                                                                >  1:3115942/1‑151 (MQ=38)
                                        aTACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGt                                                                                                             <  1:1941102/151‑1 (MQ=255)
                                         tACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTa                                                                                                            <  1:1590168/151‑1 (MQ=255)
                                              gCGGTGCTGGCGTTGGTCCACAGGTGCGGGCCGTAGCCGATCGACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTagctca                                                                                                       <  2:505105/151‑1 (MQ=255)
                                                 gTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTagctcagct                                                                                                    >  1:5198358/1‑151 (MQ=255)
                                                     tGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCttt                                                                                                <  2:3513832/151‑1 (MQ=255)
                                                     tGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCttt                                                                                                >  2:1662650/1‑151 (MQ=255)
                                                      ggCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTg                                                                                               >  2:1305736/1‑151 (MQ=255)
                                                       gCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGt                                                                                              <  1:718525/151‑1 (MQ=255)
                                                        cGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTa                                                                                             <  2:4898231/151‑1 (MQ=255)
                                                        cGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTa                                                                                             >  2:2855170/1‑151 (MQ=255)
                                                         gTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTag                                                                                            >  2:1942407/1‑151 (MQ=255)
                                                         gTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTCGGTAGCTCAGCTCTTTGTag                                                                                            >  2:1922602/1‑151 (MQ=255)
                                                           tGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTagag                                                                                          <  1:4428629/151‑1 (MQ=255)
                                                           tGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTagag                                                                                          >  1:3156687/1‑151 (MQ=255)
                                                            ggTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAgg                                                                                         >  2:2190052/1‑151 (MQ=255)
                                                             gTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGc                                                                                        >  1:1429083/1‑151 (MQ=255)
                                                             gTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGCGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGCTAGGTAGCGCTCACGGCGGTGGGAGTCCTCCAGCGCTTGGTAGCTCAGCTCTTCGTAGAGGc                                                                                        >  2:3407583/1‑151 (MQ=14)
                                                              tCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGcc                                                                                       <  2:439936/151‑1 (MQ=255)
                                                               ccACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGccc                                                                                      <  1:2315474/151‑1 (MQ=255)
                                                               ccACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGccc                                                                                      <  2:2563711/151‑1 (MQ=255)
                                                                cacaGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCcg                                                                                     <  1:4375171/151‑1 (MQ=255)
                                                                  caGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCcgcg                                                                                   >  1:4565046/1‑151 (MQ=255)
                                                                   aGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCgcgc                                                                                  >  1:5111726/1‑151 (MQ=255)
                                                                    ggTGGGGGCTGTAGCCGATCCACACTTCCTTGGCCGGGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGcc                                                                                 <  2:3129434/151‑1 (MQ=255)
                                                                     gTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCg                                                                                <  1:4908974/151‑1 (MQ=255)
                                                                        cGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACg                                                                             <  1:776710/151‑1 (MQ=255)
                                                                         gggCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGTTAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCCTTGTAGAGGCCCGGGCCGACgg                                                                            >  2:1074794/1‑150 (MQ=255)
                                                                         gggCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGt                                                                            <  2:4458323/151‑1 (MQ=255)
                                                                           gCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGc                                                                          <  1:3452828/151‑1 (MQ=255)
                                                                           gCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGc                                                                          >  2:2151613/1‑151 (MQ=255)
                                                                            cTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGCCGTGcc                                                                         >  2:4490955/1‑150 (MQ=255)
                                                                             tGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTc                                                                        >  2:3632881/1‑151 (MQ=255)
                                                                             tGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTc                                                                        >  2:638376/1‑151 (MQ=255)
                                                                                 gCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCatga                                                                    >  2:2810066/1‑151 (MQ=255)
                                                                                  ccGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCatgaa                                                                   <  2:958089/151‑1 (MQ=255)
                                                                                   cGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCatgaat                                                                  <  1:3625859/151‑1 (MQ=255)
                                                                                   cGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCatgaat                                                                  <  2:1967284/151‑1 (MQ=255)
                                                                                    gATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCatgaatg                                                                 >  1:1754247/1‑151 (MQ=255)
                                                                                         acacTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAg                                                            >  2:390661/1‑151 (MQ=255)
                                                                                         acacTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAg                                                            <  2:4409808/151‑1 (MQ=255)
                                                                                          cacTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCCTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCacc                                                           >  2:3309080/1‑149 (MQ=255)
                                                                                            cTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCtt                                                         >  1:3747862/1‑151 (MQ=255)
                                                                                             ttCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCttt                                                        <  1:4284028/151‑1 (MQ=255)
                                                                                              tCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCtttt                                                       <  1:865298/151‑1 (MQ=255)
                                                                                               ccTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTc                                                      <  2:862783/151‑1 (MQ=255)
                                                                                                 ttGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCGTTTCGc                                                    >  1:4695644/1‑151 (MQ=255)
                                                                                                    gCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCCGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCt                                                 <  2:16743/151‑1 (MQ=255)
                                                                                                    gCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACTAGCTGTTCGCCCt                                                 >  1:5034520/1‑151 (MQ=255)
                                                                                                    gCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCt                                                 <  2:5150017/151‑1 (MQ=255)
                                                                                                    gCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCt                                                 <  1:2747582/151‑1 (MQ=255)
                                                                                                          tCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGc                                           <  2:2021209/151‑1 (MQ=25)
                                                                                                            cTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCt                                         <  2:209587/151‑1 (MQ=25)
                                                                                                             tGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCtt                                        <  1:3321030/151‑1 (MQ=25)
                                                                                                             tGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCtt                                        >  1:1159827/1‑151 (MQ=25)
                                                                                                              ggCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCttt                                       <  1:1278363/151‑1 (MQ=25)
                                                                                                                cAGGTGTCGGCCCACACCGAGCCGGTGCTCTTGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCa                                     >  2:2056927/1‑151 (MQ=255)
                                                                                                                 aGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCt                                                 <  1:2596215/138‑1 (MQ=37)
                                                                                                                 aGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCAt                                    >  1:4532726/1‑151 (MQ=25)
                                                                                                                 aGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCAt                                    >  1:2140359/1‑151 (MQ=18)
                                                                                                                       cGGCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAacac                              >  2:2468836/1‑151 (MQ=25)
                                                                                                                        ggCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACg                             <  1:923445/151‑1 (MQ=25)
                                                                                                                         gCCCACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGt                            >  1:2804287/1‑151 (MQ=21)
                                                                                                                           ccACACCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAg                          <  2:1430587/151‑1 (MQ=25)
                                                                                                                            cacaCCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGa                         >  2:3539019/1‑151 (MQ=18)
                                                                                                                             acccccAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGAc                        <  2:3107162/148‑1 (MQ=21)
                                                                                                                             acacCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCCTGACCACGTAGAc                        >  2:1015781/1‑151 (MQ=255)
                                                                                                                               acCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACAt                      <  2:3022712/151‑1 (MQ=25)
                                                                                                                               acCCAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGAAAt                      >  2:3372040/1‑151 (MQ=25)
                                                                                                                                cccAGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACATa                     <  2:4015795/151‑1 (MQ=25)
                                                                                                                                   aGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACATAGcc                  <  2:4609468/151‑1 (MQ=25)
                                                                                                                                   aGCCGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACATAGcc                  <  1:435915/151‑1 (MQ=18)
                                                                                                                                     ccGGTGCTCTGGCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACATAGcctg                <  1:4864183/151‑3 (MQ=25)
                                                                                                                                             ctGGCCGGATAGGTAGCGCTCAGGGCGGGGGTGGTCCTCCAGCAGTTGGTAGCTCAGCTGTTTGTAGAGGCCCGCGCATACGTGCTCAGGAGTGACCAGCTTTTCGACATGAGGGCCTTTCATGAACACGTAGACATAGCCTGGGCGCaaa        <  2:5226046/151‑1 (MQ=11)
                                                                                                                                                gCCGGATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACATAGCCTGGGCGCAAAGcg     <  2:2769075/151‑2 (MQ=255)
                                                                                                                                                   ggATAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACATAGCCTGGGCGCAAAGCGCgg  >  2:3207641/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
CTGGCGCATGTGCCGTTTGCGCAGGGCTGCCGAACCGGTGATACGGGCGGTGATGGCGTTGGTCCACAGGTGCGGGCTGTAGCCGATCCACACTTCCTTGGCCGTGTCCTGGCAGGTGTCGGCCCACACCCAGCCGGTGCTCTGGCCGGACAGGTAGCGCTCACGGCGGTGGTAGTCCTCCAGCCCTTGGTAGCTCAGCTCTTTGTAGAGGCCCGCGCCGACGTGCTCATGAATGACCAGCTTTTCGCCCTGAGGGCCTTTCATGAACACGTAGACATAGCCCGGGCGCAAAGCACGG  >  CP009974/4541354‑4541651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑