| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 5,426,639 | T→C | V332V (GTA→GTG) | RPPX_24160 ← | damage‑inducible protein CinA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 5,426,639 | 0 | T | C | 98.1% | 362.1 / ‑0.1 | 160 | V332V (GTA→GTG) | RPPX_24160 | damage‑inducible protein CinA |
| Reads supporting (aligned to +/- strand): ref base T (0/3); new base C (81/74); total (81/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.69e-01 | |||||||||||
Only 100 of 169 total aligned reads displayed.
GAACCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACTACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGCCCGAA > CP009974/5426491‑5426786 | aaCCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCaccacc < 1:4659770/151‑1 (MQ=255) aCCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGccaccacca > 2:3979605/1‑151 (MQ=255) aCCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCaccaccc > 2:1950107/1‑150 (MQ=255) cGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGc > 1:3188198/1‑151 (MQ=255) cGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGACGATGCCGTACGCGGCCGCGGCATTGGCAAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGc < 1:962825/151‑1 (MQ=255) ggCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCg > 1:2346738/1‑151 (MQ=255) gCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCgg > 2:551764/1‑151 (MQ=255) cTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCggg < 2:1983432/151‑1 (MQ=255) cTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCggg < 1:863919/151‑1 (MQ=255) gggCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGa < 2:3739912/150‑1 (MQ=255) ccAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAAcc < 2:3734696/151‑1 (MQ=25) cAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCa > 2:1088041/1‑151 (MQ=25) aggcgccGAAGCTCGGGCAATTTCCACCGGGGCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAg < 1:4799285/146‑1 (MQ=255) aaGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAg > 1:2603786/1‑151 (MQ=25) cACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTgg > 1:2286008/1‑151 (MQ=25) cACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTgg > 2:497482/1‑151 (MQ=25) ccGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCt < 2:2777937/151‑1 (MQ=18) ccGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCt > 1:3740366/1‑151 (MQ=21) aaGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCa < 2:1167378/151‑1 (MQ=18) gcgcGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACg > 1:1968010/1‑151 (MQ=17) gcgcGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACg < 1:1924032/151‑1 (MQ=17) cgcgGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACAAGTGGCTCCACGc > 1:823806/1‑151 (MQ=17) ggCAATTTCCACCGGGGCGATGCCGTACGCGGCCGTGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTcc < 2:3126295/151‑1 (MQ=9) gCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCg > 2:3547855/1‑151 (MQ=14) cAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCgg < 1:2506533/151‑1 (MQ=14) aaTTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGa > 1:3581629/1‑151 (MQ=11) acaACGCCAAAGTAGTGCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCgaga < 2:1598251/151‑1 (MQ=14) acaACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCgaga < 1:4548198/151‑1 (MQ=14) caACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGaa > 1:1464297/1‑151 (MQ=14) caACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGaa > 2:1514089/1‑151 (MQ=14) aCGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGaaaa < 2:1417088/151‑1 (MQ=14) aCGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGaaaa < 2:1418652/151‑1 (MQ=14) cGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACTACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAAt < 1:2190742/151‑1 (MQ=32) cGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAAt < 1:5111099/151‑1 (MQ=17) gCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCgag > 2:3138071/1‑145 (MQ=11) gCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCgag < 1:3138071/145‑1 (MQ=11) cAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATAcc > 1:3524833/1‑151 (MQ=14) cAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATAcc > 1:3515177/1‑151 (MQ=17) aaaGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCg < 2:5168151/151‑1 (MQ=17) agtagtACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCTCCAGCGTCTGGGCCACTGCATCGACCATCTTGGTACCCGAGAAAATACCGGc > 2:4610145/1‑151 (MQ=12) agtagtACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGc > 1:858998/1‑151 (MQ=14) tagtaCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCaa < 2:726900/151‑1 (MQ=17) gtaCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAg < 1:3697860/151‑1 (MQ=17) aCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGAt > 1:2963559/1‑151 (MQ=17) aCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGAt > 1:2762107/1‑151 (MQ=17) aCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGAt > 2:2135666/1‑151 (MQ=17) cgcgTCGTTGGACAGCACGAAGGCCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCCTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATg > 2:74683/1‑151 (MQ=9) cgcgTCGTTGGACAGCACGAAGGACAGCGGCCGGCGGGTCAGCGCCACATCCAGCGGGAACCAGTAGCGCCACGCTTCCTGAATCCAGTCCCCCAGCGTCTGGGCCAATGCTTCGAGCATCTGGGTACCCTAGAATGTTCCGGCAAAAATg < 2:3594489/151‑1 (MQ=11) gcgTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCCGCGCCACCACCAGCGGGAACCAGTGGCTCCAAGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGc < 2:892593/151‑1 (MQ=9) gtcgtTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGccc > 2:4823925/1‑151 (MQ=14) gtcgtTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGccc < 2:1826811/151‑1 (MQ=17) tcgtTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCcg > 1:2190685/1‑151 (MQ=17) cgtTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCcgc < 1:4815668/151‑1 (MQ=17) gtTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCcgcg > 1:411913/1‑151 (MQ=14) ttGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcgg > 2:3289130/1‑151 (MQ=14) ttGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcgg < 2:2407009/151‑1 (MQ=17) tGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcggc > 2:2284095/1‑151 (MQ=14) tGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcggc > 2:2284062/1‑151 (MQ=14) ggggcAGCAAGAAGGACAGCGGCAGGCGGATCAGCGCCACCACCAGCGGGAACCAGTAGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACACGAGAAAATACCGGCAAAGATGCCCgcggc < 2:4195286/147‑1 (MQ=11) ggACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcggcg > 1:3699792/1‑151 (MQ=17) ggACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcggcg < 2:4886344/151‑1 (MQ=17) aCAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGaa < 2:918130/151‑1 (MQ=17) aCAGCACGAAGGTCAGCGGCATGCTGGCCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGaa < 2:4790267/151‑1 (MQ=17) cAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAac > 2:2356389/1‑151 (MQ=17) aGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAaca > 2:3469787/1‑151 (MQ=14) gCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAacac < 1:1446476/151‑1 (MQ=14) aCGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACca > 2:2418142/1‑151 (MQ=14) aCGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACca > 2:3764680/1‑151 (MQ=17) aCGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACca > 1:2405932/1‑151 (MQ=14) gAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACcagc > 2:131162/1‑151 (MQ=14) gAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACcagc > 1:267022/1‑151 (MQ=17) aaGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACcagca < 2:2528127/151‑1 (MQ=17) aaGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACcagca < 1:600655/151‑1 (MQ=17) gTCCGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAgcagca < 2:2644597/151‑1 (MQ=17) gTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCTGCGAACACCAgcagca > 1:2615442/1‑151 (MQ=14) tCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcac > 1:900978/1‑151 (MQ=17) cAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacc < 1:202643/151‑1 (MQ=17) cAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacc < 1:497482/151‑1 (MQ=17) gCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcaccac < 2:3544194/151‑1 (MQ=17) gCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGt < 1:387390/151‑1 (MQ=21) gCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGt > 1:139977/1‑151 (MQ=21) gCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGt < 1:1088041/151‑1 (MQ=18) cATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTc < 1:128048/151‑1 (MQ=21) cATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTc > 2:76033/1‑151 (MQ=25) aTGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCa > 2:204497/1‑151 (MQ=25) tGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCAt < 1:3093940/151‑1 (MQ=21) gCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATg > 1:290422/1‑151 (MQ=21) cTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACGAGCGTCTGGGCCAATGCAGCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATgg < 2:4991842/151‑1 (MQ=255) cTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATgg < 2:2966286/151‑1 (MQ=25) tCAGCGCCACTACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGtt < 1:4172227/151‑1 (MQ=35) tCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGtt > 1:3543645/1‑151 (MQ=25) cgcgcCACCACCAGCGGAGAGCAGCGGCCCCACGCTTCCGCAATCCAGTCCACCAGCGTCTCGGCCAATGCATCCACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGttcc < 2:4766013/150‑3 (MQ=11) aGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGc > 2:4182101/1‑151 (MQ=21) cgcCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGccc > 2:4002803/1‑151 (MQ=25) cgcCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGccc < 1:1620882/151‑1 (MQ=21) cgcCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGccc < 2:547744/151‑1 (MQ=21) cgcCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGccc > 2:4001906/1‑151 (MQ=21) gcCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGCCCg > 2:1579312/1‑151 (MQ=25) gcCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGCCCg < 1:2387213/151‑1 (MQ=25) gcCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGCCCg < 1:5070822/151‑1 (MQ=25) | GAACCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACTACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGCCCGAA > CP009974/5426491‑5426786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |