BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	5,595,953	T→C	L225P (CTC→CCC)	RPPX_24915 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	5,595,953	0	T	C	100.0%	594.1 / NA	253	L225P (CTC→CCC)	RPPX_24915	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/128); total (125/128)

Only 100 of 254 total aligned reads displayed.

CAGCCCCATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCTCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAACCCACCC  >  CP009974/5595805‑5596099

       aTGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCa                                                                                                                                           >  1:1618890/1‑151 (MQ=17)

         gtgCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAAc                                                                                                                                         >  2:2898799/1‑151 (MQ=17)

         gtgCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAAc                                                                                                                                         >  1:1884529/1‑151 (MQ=17)

          tgctgcCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAAcc                                                                                                                                        >  1:2122296/1‑151 (MQ=14)

             tgcCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGaa                                                                                                                                     >  1:1808559/1‑151 (MQ=17)

              gcCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCTATCGGCAACTTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCTaaa                                                                                                                                    >  1:3037020/1‑151 (MQ=9)

              gcCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGaaa                                                                                                                                    >  1:2531264/1‑151 (MQ=14)

                  gtcagtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGc                                                                                                                                >  2:5228677/1‑151 (MQ=14)

                    cagtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCg                                                                                                                              >  2:1227176/1‑151 (MQ=17)

                    cagtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCg                                                                                                                              <  1:4205155/151‑1 (MQ=17)

                     agtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCgg                                                                                                                             >  1:711988/1‑151 (MQ=17)

                     agtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCgg                                                                                                                             >  2:1338846/1‑151 (MQ=17)

                      gtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCggt                                                                                                                            >  1:3894256/1‑151 (MQ=17)

                        gCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCggtgg                                                                                                                          >  1:838094/1‑151 (MQ=17)

                         cccTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCCGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGACAGTGCCggtggt                                                                                                                         >  1:4053679/1‑151 (MQ=12)

                         cccTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCggtggt                                                                                                                         <  1:915507/151‑1 (MQ=14)

                            tGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCggtggtggt                                                                                                                      >  1:2417313/1‑151 (MQ=17)

                             gCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGgtggtggtg                                                                                                                     <  2:2442394/151‑1 (MQ=17)

                             gCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGgtggtggtg                                                                                                                     >  1:425195/1‑151 (MQ=17)

                               aaaCCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGgc                                                                                                                   >  2:2285093/1‑151 (MQ=17)

                                 aCCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGCGGTGgcgc                                                                                                                 >  2:4162842/1‑151 (MQ=14)

                                    tGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCg                                                                                                              >  2:1979540/1‑151 (MQ=14)

                                    tGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCg                                                                                                              >  2:2040402/1‑151 (MQ=17)

                                     gggTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGc                                                                                                             >  1:1019717/1‑151 (MQ=14)

                                     gggTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGc                                                                                                             >  1:553131/1‑151 (MQ=17)

                                      ggTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGcc                                                                                                            <  1:2609439/151‑1 (MQ=17)

                                       gTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCg                                                                                                           >  1:1945830/1‑151 (MQ=17)

                                       gTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCg                                                                                                           >  2:741328/1‑151 (MQ=17)

                                          gAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGCGGCGGTGGCGCTCGCCGATg                                                                                                        >  2:3653422/1‑151 (MQ=12)

                                          gAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTCCCGGTGGTGGTGGCGCTCGCCGATg                                                                                                        >  2:3356301/1‑151 (MQ=14)

                                             gACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCg                                                                                                     <  1:4526852/151‑1 (MQ=17)

                                              aCTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGa                                                                                                    <  2:1761891/151‑1 (MQ=17)

                                               cTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGaa                                                                                                   <  1:3538146/151‑1 (MQ=17)

                                               cTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGaa                                                                                                   <  1:3082963/151‑1 (MQ=14)

                                                ttCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAg                                                                                                  <  2:596896/151‑1 (MQ=17)

                                                   aaGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGGGGTGGTGGCGCTCGCCGATGCCGAAGGCa                                                                                               >  1:4217702/1‑151 (MQ=18)

                                                    aGCCACCCGCGCGGCGAGTGCCGCTAACGAGGAGCAGTGACCCGATCACCGAACCCCAGCCCACCGGCAGCCTCACTGCCAACGCCCGGCACTACCCCTGAACCCGGCCGAATGTGCCGGTGGTGGTGGCGCTCGCCGATGGCGAAGGCAt                                                                                              <  2:2665570/151‑1 (MQ=11)

                                                     gCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATg                                                                                             >  1:1345877/1‑151 (MQ=21)

                                                     gCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATg                                                                                             <  2:647211/151‑1 (MQ=21)

                                                     gCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATg                                                                                             <  2:5098057/151‑1 (MQ=18)

                                                          ccGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCt                                                                                        >  1:3695567/1‑151 (MQ=21)

                                                            gAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTgg                                                                                      >  1:3959344/1‑151 (MQ=21)

                                                            gAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTgg                                                                                      >  1:1536824/1‑151 (MQ=21)

                                                                ggcgCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCt                                                                                  >  1:4334977/1‑151 (MQ=21)

                                                                ggcgCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCt                                                                                  >  1:4646528/1‑151 (MQ=21)

                                                                 gcgcATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTg                                                                                 >  1:4934598/1‑151 (MQ=25)

                                                                   gcATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCACCCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGCCATGGCCCTGGAcccgcc                                                                               >  2:4871901/1‑147 (MQ=255)

                                                                     aTGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGcc                                                                             <  1:1742084/151‑1 (MQ=25)

                                                                      tGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCt                                                                            <  1:104961/151‑1 (MQ=25)

                                                                      tGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCt                                                                            >  2:1441014/1‑151 (MQ=18)

                                                                       gCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTg                                                                           >  2:1134892/1‑151 (MQ=18)

                                                                         cGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTc                                                                         >  1:5125656/1‑151 (MQ=21)

                                                                          gCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCg                                                                        <  1:885518/151‑1 (MQ=25)

                                                                          gCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCg                                                                        >  2:1160127/1‑151 (MQ=21)

                                                                           cTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAACGCATGGCCCTGGACCTGAGCCTGTCgg                                                                       >  2:731964/1‑151 (MQ=18)

                                                                            tAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGt                                                                      >  1:2244984/1‑151 (MQ=18)

                                                                            tAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGt                                                                      >  1:2739766/1‑151 (MQ=18)

                                                                            tAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGt                                                                      <  2:3342748/151‑1 (MQ=18)

                                                                             aaCCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGtc                                                                     >  1:5019345/1‑151 (MQ=18)

                                                                                cTGGAGCCGCGACCCGCTCCCCGAAACCTCGCCCATCGGCACCCTCACTGCCATCGCCCGGCACTCCCCCTCGACCCCACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCg                                                                  <  2:2332417/151‑1 (MQ=11)

                                                                                cTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCg                                                                  >  1:1800702/1‑151 (MQ=14)

                                                                                   gAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGcc                                                               <  1:2959297/151‑1 (MQ=17)

                                                                                       agcGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGACGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTAcc                                                           >  2:3726591/1‑151 (MQ=17)

                                                                                             ccGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATc                                                     >  2:1907751/1‑151 (MQ=14)

                                                                                               gATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCaa                                                   >  1:2633072/1‑151 (MQ=17)

                                                                                                    ccGAAACCTTGCCCATCGGCAGCCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCg                                              <  2:2091066/151‑1 (MQ=14)

                                                                                                       aaaCCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGa                                           <  2:1808559/151‑1 (MQ=17)

                                                                                                         aCCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGAcc                                         >  1:3382284/1‑151 (MQ=17)

                                                                                                            ttGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGa                                      <  2:2241206/151‑1 (MQ=17)

                                                                                                             tGCCGATCTGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGAt                                     <  2:3399811/151‑1 (MQ=12)

                                                                                                                ccATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgcc                                  <  1:93577/151‑1 (MQ=17)

                                                                                                                 cATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccg                                 <  1:736590/151‑1 (MQ=14)

                                                                                                                    cGGCAACCTGACTGCCATCGCCCGGCACTACTCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCAGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccggcc                              <  2:4095700/151‑1 (MQ=9)

                                                                                                                    cGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccggtc                              >  1:2089593/1‑149 (MQ=17)

                                                                                                                    cGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccggcc                              >  1:2274924/1‑151 (MQ=14)

                                                                                                                    cGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccggcc                              >  1:1674767/1‑151 (MQ=17)

                                                                                                                      gCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGa                            <  2:1618890/151‑1 (MQ=17)

                                                                                                                      gCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGa                            <  2:1274292/151‑1 (MQ=17)

                                                                                                                      gCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGa                            >  2:3944414/1‑151 (MQ=17)

                                                                                                                       cAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAg                           >  1:3164382/1‑151 (MQ=17)

                                                                                                                       cAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAg                           >  2:4400906/1‑151 (MQ=17)

                                                                                                                       cAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAg                           >  1:4678960/1‑151 (MQ=14)

                                                                                                                        aaCCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCCACTGCGTGACCTGATGCCGGCCGAGc                          >  2:3497451/1‑151 (MQ=14)

                                                                                                                        aaCCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGc                          <  1:3027565/151‑1 (MQ=17)

                                                                                                                         cccTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCa                         <  2:4242170/150‑1 (MQ=17)

                                                                                                                          ccTCACTTCCTTCTCCCGGCACCACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGCGGCGCTCGCGGAGGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACGGGATGGCGGCCGAGCaa                        <  2:3043474/151‑1 (MQ=11)

                                                                                                                          ccTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCaa                        <  2:2726918/151‑1 (MQ=17)

                                                                                                                          ccTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCaa                        <  2:2597546/151‑1 (MQ=14)

                                                                                                                            tCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGCGCAAcc                      >  2:4966507/1‑150 (MQ=9)

                                                                                                                             cACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAgtcacat                     <  1:2040402/151‑7 (MQ=12)

                                                                                                                              aCTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTgg                    <  1:1251137/151‑1 (MQ=17)

                                                                                                                               cTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGa                   <  2:1024033/151‑1 (MQ=17)

                                                                                                                                 gCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAac                 <  2:2181004/151‑1 (MQ=18)

                                                                                                                                 gCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAac                 <  1:5228677/151‑1 (MQ=18)

                                                                                                                                  ccATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAaca                <  1:4815517/151‑1 (MQ=21)

                                                                                                                                    aTCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAacaca              >  2:873141/1‑151 (MQ=21)

                                                                                                                                        cccGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGACCACACaaa          >  2:2502629/1‑151 (MQ=17)

                                                                                                                                        cccGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACaaa          <  2:471289/151‑1 (MQ=25)

                                                                                                                                          cGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAac        <  1:3284854/151‑1 (MQ=21)

                                                                                                                                                tACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAacccaccc  >  2:4585032/1‑151 (MQ=38)

CAGCCCCATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCTCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAACCCACCC  >  CP009974/5595805‑5596099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`