| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 753,050 | A→G | intergenic (+50/‑204) | RPPX_03275 → / → RPPX_03280 | porin/NAD‑dependent dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 753,050 | 0 | A | G | 99.6% | 912.1 / NA | 257 | intergenic (+50/‑204) | RPPX_03275/RPPX_03280 | porin/NAD‑dependent dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (136/120); total (136/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 258 total aligned reads displayed.
AGCGTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAACCACCG > CP009974/752902‑753197 | cGTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGcggc < 2:1485081/151‑1 (MQ=255) gTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAgcggcg < 1:4626355/151‑1 (MQ=255) tGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGcggcgg > 2:2471194/1‑151 (MQ=255) aaaTGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGt > 2:4455109/1‑151 (MQ=255) aaTGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTg > 2:1563904/1‑151 (MQ=255) ggCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGgag > 1:487293/1‑151 (MQ=255) ggCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGgag > 1:1976942/1‑151 (MQ=255) aagtcgtcgATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTgg < 1:1001235/148‑1 (MQ=255) aaCTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTgg > 1:4393943/1‑151 (MQ=255) aaCTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGAGTgg > 2:3324787/1‑151 (MQ=255) cTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGcc < 1:4171366/151‑1 (MQ=255) tcgtcgATTCGCCGGGATTACAGCAACAACGAGGTTGATGAGCACCGGTTGATCCTCAACTACCCATTGTCGCTGCTCTGATCATGACCTGCGGATTTACCCGCGAAGACGGTGGCCGCCCAGACGGTGAGCGGCGGGTGGCGATTGGccc > 2:1933412/1‑150 (MQ=255) gtcgATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCcagc > 1:1749472/1‑151 (MQ=255) cgATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCcagcag < 2:4436300/151‑1 (MQ=255) gATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAgg > 2:675485/1‑151 (MQ=255) aTTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAggg < 2:312589/151‑1 (MQ=255) gCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccgg < 1:2745700/151‑1 (MQ=255) gCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccgg > 2:1080531/1‑151 (MQ=255) gCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGCGAGCGGCGGGTGGAGATCGGCCAGCAGcgccgg > 2:3672232/1‑151 (MQ=255) cGGGATTACAGCAATGGCGAGTGTGATGAGATGCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAAGACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccggcc < 1:3755499/151‑1 (MQ=37) cGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccggcc > 1:2606211/1‑151 (MQ=255) cGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccggcc < 2:4862882/151‑1 (MQ=255) gggATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCct > 1:1068790/1‑151 (MQ=255) aTTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCtt > 1:2620314/1‑151 (MQ=255) ttACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTc > 1:2850092/1‑151 (MQ=255) cAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGGCTCTTCGCgggg > 2:1233558/1‑150 (MQ=255) tAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTaaa < 1:2786901/151‑1 (MQ=255) cGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAccc > 1:3131736/1‑151 (MQ=255) gAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCg > 1:3204485/1‑151 (MQ=255) aGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGc < 2:878197/151‑1 (MQ=255) aGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGc > 1:1887991/1‑151 (MQ=255) aGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGc > 1:2083753/1‑151 (MQ=255) tgatgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCt > 2:353729/1‑151 (MQ=255) gatgaGTACCGGTTGATCTTCAACTACCCATTGTCTTTTTTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGATGGTGAGCGGCGGGTGGAGGTTGGCCAGCAGGGCCGGCCTCTTCGAGGGTAAACAAGCTCCTa > 1:217978/1‑151 (MQ=21) gatgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTa < 2:1873504/151‑1 (MQ=255) atgacgaCCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc < 2:3927750/145‑1 (MQ=255) atgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCtcc > 2:3466990/1‑149 (MQ=255) atgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc < 2:4893914/151‑1 (MQ=255) tgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCGGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACg < 1:472246/151‑1 (MQ=255) aaCCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCCGCGGATTTACCCGCGAATCCGGTGGCGGCGGACACGGTGAGCGGCGGGCGGAGATTGGCCCGCACGGCCGCCCCCTCCCCGGCCCACCCCGCTCCCAccgccc > 2:1942972/1‑146 (MQ=255) cGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGAcc < 1:2761569/151‑1 (MQ=255) ggTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACcg > 2:2858924/1‑151 (MQ=255) tGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCgcgc > 2:4777587/1‑151 (MQ=255) gATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccggcc > 1:1223219/1‑113 (MQ=255) tCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGCTTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAgg > 1:3631854/1‑151 (MQ=255) ttCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGCGTTTGGCCAGAGCGGCCGGCCTCCTCCCTTGTAAACACGCGCCTACGGGCCACCGCGCCGGcc > 2:396121/1‑151 (MQ=21) ttCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCCGGcc > 1:4038790/1‑151 (MQ=255) ttCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGcc > 2:1381942/1‑151 (MQ=255) tCAACTACCCATTGTCGTTGCTCTGATCATGCCCTGCGGATTTCCCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCt < 2:2030679/151‑1 (MQ=255) tCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCt < 1:3985028/151‑1 (MQ=255) cAACTGCCCATTGTCGTTGCTCTGGTCGTGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGGGAGCGGCGGGTGGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCtt < 2:4753720/151‑1 (MQ=18) cAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCtt < 2:4656510/151‑1 (MQ=255) tACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGc > 2:4836564/1‑151 (MQ=255) cATTGTCGTTGCTCTGATCATGGCCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCttt < 2:2600505/151‑1 (MQ=255) tGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGTGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCt > 2:5066670/1‑151 (MQ=255) tCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTa < 2:4210599/151‑1 (MQ=255) tCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTa < 1:3072493/151‑1 (MQ=255) tCGTTGCACTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTa < 2:3208875/151‑1 (MQ=255) cGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAc < 1:529067/151‑1 (MQ=255) cGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAc < 1:3395281/151‑1 (MQ=255) cGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAc < 1:2323706/151‑1 (MQ=255) cGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAc > 1:1327212/1‑151 (MQ=255) ttGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTCTTCTTAccc > 2:3075501/1‑151 (MQ=255) tGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCcg > 1:331716/1‑151 (MQ=255) tGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCcg < 2:2568790/151‑1 (MQ=255) tGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTATTCTTACCcg > 1:3612612/1‑151 (MQ=255) tctGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGa < 1:3273562/151‑1 (MQ=255) tctGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGa > 2:5195311/1‑151 (MQ=255) ctGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTGTCGCCTTTTCTTACCCGCGaa > 1:5055033/1‑151 (MQ=255) tGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGaaa < 1:161815/151‑1 (MQ=255) tCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAgg > 2:2235310/1‑151 (MQ=255) aTGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGcc < 1:336301/151‑1 (MQ=255) gACCTGCCGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTCAGCGGCGGGTGCAGAATGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCCCCTACCGCCGACCGCGCCGGCCCTTCGCCCTCTCTCACCCGCGCCAAGGCCgg > 2:2974462/1‑151 (MQ=17) aCCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGc < 1:3656755/151‑1 (MQ=255) gCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCaaaa < 1:1438824/151‑1 (MQ=255) gCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCaaaa < 1:3846541/151‑1 (MQ=255) ggATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgc > 1:2476582/1‑151 (MQ=255) gATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgcc > 1:50693/1‑151 (MQ=255) gATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgcc < 1:89972/151‑1 (MQ=255) gATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGCGCGACCGCGCAGGCCTTTCGCCTTTTCCTACCCGCGAAAAGGCCGGCAAAAgcc > 2:1312672/1‑151 (MQ=255) ttACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgccgcc > 1:2988763/1‑151 (MQ=255) cccGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCaa < 1:4453884/151‑1 (MQ=255) ccGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAg < 2:5238175/151‑1 (MQ=255) cgcgAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGc > 1:5130762/1‑151 (MQ=255) aaTACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCa < 2:4263527/151‑1 (MQ=255) tACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCGGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCAtt < 2:4046229/151‑1 (MQ=255) aCGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTg > 1:3724883/1‑151 (MQ=255) aCGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTg > 2:3255835/1‑151 (MQ=255) tGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGacaa > 1:1809524/1‑151 (MQ=255) gggcggcGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGacaa < 2:180738/150‑1 (MQ=255) cggcggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAacac < 2:3600056/151‑1 (MQ=255) ggcggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAacaca < 1:1581108/151‑1 (MQ=255) gcggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAacacac > 1:725285/1‑151 (MQ=255) cggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAacacacc > 2:631510/1‑150 (MQ=255) ggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAg > 2:4073049/1‑151 (MQ=255) ggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCCCATTGACAacacacca > 2:2816370/1‑149 (MQ=255) ggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTGTCGCCCTTTCAGACCCGCGAAAAGGCCGGCAAAAGCCGCCCCACCCTCATTGACcacacacaa > 2:4957168/1‑150 (MQ=25) gagaCGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGa < 1:2235310/151‑1 (MQ=255) gaCGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAACCCCCATTCACAACACACAGAac > 1:4082383/1‑151 (MQ=255) ggTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAaccac > 2:4305453/1‑151 (MQ=255) | AGCGTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAACCACCG > CP009974/752902‑753197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |