| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 25,890 | G→A | intergenic (+315/‑256) | RPPX_00140 → / → RPPX_00145 | MarR family transcriptional regulator/(2Fe‑2S)‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 25,890 | 0 | G | A | 91.1% | 660.0 / 34.6 | 233 | intergenic (+315/‑256) | RPPX_00140/RPPX_00145 | MarR family transcriptional regulator/(2Fe‑2S)‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (1/19); new base A (100/104); total (106/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.67e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-02 | |||||||||||
Only 100 of 253 total aligned reads displayed.
CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAT > CP009974/25730‑26037 | ccAATCTCCGCCCGCCGTCCCCCGTGGCCGGCCCCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTg < 2:3124936/151‑1 (MQ=2)ccAACCTCCCCCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGCTACACCCGCTCCTACACACAAA‑‑‑‑‑‑‑‑‑C‑GCACAGGCCTGCGTAGGAGCGGGTACACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTg < 2:2642941/151‑1 (MQ=2) aagacccACCCGCCGTTCCCCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACATAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgcc < 1:2673172/146‑1 (MQ=2) ccccGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCa < 2:1156982/150‑1 (MQ=2) ccgccgTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCAcc < 2:643735/151‑1 (MQ=2) cgccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTacc < 1:4833794/151‑1 (MQ=255) cgccgTACACCGTGGCGGCCGCCACCGTCTTGGCGGGTCAACCCGCCCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTacc < 2:1184255/151‑1 (MQ=17) gccgTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGt < 1:3021245/151‑1 (MQ=2) gccgTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGt < 1:5235114/151‑1 (MQ=2) gccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccg > 1:1227038/1‑151 (MQ=255) ccgTTCCCCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTa < 1:4862522/151‑1 (MQ=2) ccgTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTa < 1:1060273/151‑1 (MQ=2) ccgTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTa > 2:5130065/1‑151 (MQ=2) gTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGCGCGGGCTCACCCCCGAATCGGCCGCCCCTGCTGGCCTCCCTCCCCCCGCCCATCACCGCTcccgccg > 1:550095/1‑151 (MQ=17) cACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgccgccc > 1:3206810/1‑150 (MQ=255) cACCGTTGCCGCCGCAACCGTATACGCGGGTAAACCCGCTCCTACACACGCTTCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCa < 1:2012056/151‑1 (MQ=255) aCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGCTCACCGTTACCTCCGCCAc > 1:393594/1‑151 (MQ=255) ccGTTGCCGCCGCCACCGTAGTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCAcc < 1:161394/151‑1 (MQ=255) ttGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGCTACCGCCGCCACCGTa > 2:1422612/1‑151 (MQ=255) tGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTAt < 2:4603366/151‑1 (MQ=255) tGCCGCCGCCAACGTATACGCGGGTAAACCCGCTCCTACAAACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTAt < 1:4720639/151‑1 (MQ=17) ccgccgccCCCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTc < 1:1990496/151‑1 (MQ=255) cgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTcg > 2:4045250/1‑151 (MQ=255) ccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTcgcg > 1:513955/1‑151 (MQ=255) ccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTcgcg < 1:5158048/151‑1 (MQ=255) cgccACCGTGTTCGCGGGGAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCgg < 2:3748996/151‑1 (MQ=255) cgGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTCAACCCGCTccc > 2:2274504/1‑150 (MQ=255) gggTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTa > 2:1781009/1‑151 (MQ=255) gggTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTa > 1:4233362/1‑151 (MQ=255) ggTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCCac > 2:1054938/1‑151 (MQ=255) tAAACCCGCTCCTACACACGCATCGGGGGTTGGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTacac < 1:244443/151‑1 (MQ=255) tAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCACTCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCCGGTAAACCCGCTCCTacac > 2:3663246/1‑151 (MQ=255) aCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACg > 1:3379463/1‑151 (MQ=255) aCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACg > 1:4975620/1‑151 (MQ=255) gcgccTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATc < 1:2409146/148‑1 (MQ=255) gcccttccacacGCATCGGGGGTTCGGCACAGGCCGTGGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATc < 2:1560217/144‑1 (MQ=255) ccccTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCg < 1:948407/149‑1 (MQ=255) ccTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCggg < 1:1863471/151‑1 (MQ=255) tACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGt > 2:2576095/1‑151 (MQ=255) acacacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGtt < 1:1678952/151‑1 (MQ=255) cacacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTc < 1:1926724/151‑1 (MQ=255) cacacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTc > 1:3886265/1‑151 (MQ=255) cgcGCATCGGGGGGTGGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCgg < 2:3445883/149‑1 (MQ=255) cGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGca < 1:3466731/151‑1 (MQ=255) gCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGcac > 1:256814/1‑151 (MQ=255) gggggTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAgcgc < 1:2328249/151‑1 (MQ=255) gTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATc > 2:774394/1‑130 (MQ=255) gTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGAtc > 2:3544223/1‑150 (MQ=255) ttgggCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCGGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATgc < 2:4778800/148‑1 (MQ=255) ttCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATgc > 2:4186791/1‑151 (MQ=255) gCACAGGCCGTCGTAGGAGCGGCTTCACCCGCGAACGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCTTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgccg < 2:1833790/151‑1 (MQ=255) cacaGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgccgc > 1:776694/1‑151 (MQ=255) acaGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCcgcg > 1:1397553/1‑151 (MQ=255) acaGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCcgcg > 2:1683190/1‑151 (MQ=255) caGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCcgcgc < 1:1262646/151‑1 (MQ=255) caGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCcgcgc < 2:2134700/151‑1 (MQ=255) gCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTCCGGCACACCGCGCTCCGCcgcgcgcg > 2:5180565/1‑149 (MQ=17) ccGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggc < 2:2256851/151‑1 (MQ=255) cgtcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggcg > 1:753271/1‑151 (MQ=255) cgtcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggcg > 1:3320495/1‑151 (MQ=255) gtcgtAGGAGCGGGTTCGCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggcgg < 1:446087/151‑1 (MQ=255) gtcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggcgg > 1:158243/1‑151 (MQ=255) tcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCCCGCGggcagc > 2:3589447/1‑151 (MQ=255) tcggAGGCGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTCCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGggcggc < 2:2830623/151‑1 (MQ=255) tAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCt < 1:1429560/151‑1 (MQ=255) gggAGCGGGTTCCCCCGCGAAGGGGCCGGCCCTGCTGGCCAATCTCCTCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTc < 2:3357746/150‑1 (MQ=255) aGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTc > 1:2861465/1‑151 (MQ=255) ggAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCg > 1:3085485/1‑151 (MQ=255) gggTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTtc < 1:1682173/151‑1 (MQ=255) ttCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCa > 1:4440653/1‑151 (MQ=255) ttCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCa < 1:3226776/151‑1 (MQ=255) tCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCTCCCGCCGATCCCCGTTCCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAg < 1:348819/151‑1 (MQ=255) tCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAg < 1:3522949/151‑1 (MQ=255) cgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGa > 2:2601297/1‑151 (MQ=255) gAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCCCAGACGCCGAc > 2:1357797/1‑151 (MQ=255) aaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACaa < 2:4888037/151‑1 (MQ=255) ggccggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCt < 2:1932103/151‑1 (MQ=255) gccggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCtt < 1:2808204/151‑1 (MQ=255) tgctgGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTg < 1:3508501/151‑1 (MQ=255) cgctgGCCAATCTCCACCCGCCGATCCCCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTg < 1:4658753/150‑1 (MQ=255) gctgGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGc > 2:1329999/1‑151 (MQ=255) ctgGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTGCTCAGACGCCGACAATCTTCCTCCCTGcc > 1:3431380/1‑151 (MQ=255) gCCAATCTCCACCCGCCGCTCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCCTCGGGGTTCGGCCCAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGccccc < 2:669805/151‑1 (MQ=255) ccAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGcccccc > 1:877567/1‑151 (MQ=255) cAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCcca < 1:1018840/151‑1 (MQ=255) cAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCACCCGCCGACCATCTTCCTCCCTGccccccc > 2:4918321/1‑150 (MQ=255) aaTCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCCGACGCCGACAATCTTCCTCCCTGCCCCccac > 2:2855918/1‑151 (MQ=255) tctcCGCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCccacca < 1:4925615/151‑1 (MQ=255) ctccgtccgccgATCTCCGTTTCCGCCGTCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCcaccac < 1:4140861/145‑1 (MQ=255) ctcCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCcaccac < 1:4354914/151‑1 (MQ=255) tcctccCGCCGTTCACCGTTCCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACcaca < 2:5220730/151‑1 (MQ=255) cACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGc > 1:5079999/1‑151 (MQ=255) aCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGct > 1:2708209/1‑151 (MQ=255) cccGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCGCCCCAGccc > 2:4250313/1‑149 (MQ=255) ccgccgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGctct < 2:4975620/151‑1 (MQ=255) ccgccgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGctct < 1:3661414/151‑1 (MQ=255) cgccgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTCCCCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACCGccctc > 2:1088127/1‑151 (MQ=255) cgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCCGCATCAGCGTTGTGGACAGCGCGATGCGTCGCGCGGGCGGCGCGCGATTTCCCAGACTCCGTCACTCCTCCTCTCTTCCCCCCACCACAGctctctcc > 2:70977/1‑149 (MQ=21) cgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGc > 1:2109402/1‑151 (MQ=255) gATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCa < 2:879513/151‑1 (MQ=255) | CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAT > CP009974/25730‑26037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |