| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,158,403 | A→G | intergenic (+1926/‑13357) | RPPX_05120 → / → RPPX_05130 | hypothetical protein/channel protein TolC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,158,403 | 0 | A | G | 88.3% | 1195.6 / 129.3 | 516 | intergenic (+1926/‑13357) | RPPX_05120/RPPX_05130 | hypothetical protein/channel protein TolC |
| Reads supporting (aligned to +/- strand): ref base A (30/30); new base G (212/242); total (244/272) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 516 total aligned reads displayed.
CGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGACCCGCC > CP009974/1158262‑1158549 | cGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATc < 1:1739832/151‑1 (MQ=2) ggCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGCACGTGGTCGCCATCGATGCCGGCGGCGATTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCa > 2:4177805/1‑151 (MQ=11) caggcacACCGCCACCCTCGACCCCGCCCAGGCCAACGGCGAACTGCTGCACGTGGTAGCCATCGATGACGGCGGAGTTTCCACGCTGCCCGAACCGATCACCGCGCCCGACCTCACCGCCACTGCCGCACCGAGCGAACTGGTGATCAAt < 2:1406737/145‑1 (MQ=11) aGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCACCGCCGCACCGAGCGAACTGGTGATCAATg > 1:462859/1‑151 (MQ=11) gCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGc < 1:1560716/151‑1 (MQ=12) gCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCGGCCGCACCGCCCGCGCTGGTGATCAACGc > 2:5128408/1‑151 (MQ=11) cTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTCTCCTCGCTCCCCGCACACATCACCGCGCCCCTCATCACCGCCCCCGCCGCACCGACCGAGCCGGCGATCCATGcc > 2:1776026/1‑151 (MQ=11) cACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGAc > 1:3460229/1‑151 (MQ=12) aCCGTCACCCTCGACCCGCCTGAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGCCGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGACCGCGCTGGTGATCAATGCCGACg < 2:1169053/151‑1 (MQ=11) aCCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACg < 1:1929671/151‑1 (MQ=12) ccGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGGACAGATCACCGCGCCGGACATCACCGCCCCCGCCGCCCCGACCGAGCTGGTGATCAATGCCGAggg > 2:2350047/1‑151 (MQ=11) gTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCa < 1:2919073/151‑1 (MQ=12) gTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCa < 1:4947550/151‑1 (MQ=12) tCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCCGCCGCACCGCGCCAACTGGCGATCCATGCCCCCGGCAg > 2:3528475/1‑151 (MQ=11) cACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGc < 1:3791130/151‑1 (MQ=9) aCCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCCCCCGACATCACCGCCCCTGCCGCACCGACCCAGCTCGTGATCCATGCCCACGGCAGCg > 2:3448258/1‑151 (MQ=11) ccTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTg < 1:748567/151‑1 (MQ=12) ccTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTg < 2:704774/151‑1 (MQ=12) tCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACAACCCCCCCCCTGCCGCACCGACCGAGCTGGCGATCAATGCCGACGGCAGcgtcgt > 2:1533703/1‑151 (MQ=11) cGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTc < 1:2690082/151‑1 (MQ=255) gACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGAGCAATGCCGACGGCAGCGTGGGCa > 1:2737060/1‑151 (MQ=255) cccggcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCAcc > 1:2188/8‑151 (MQ=12) cccGCCTCAGGCCAACGGCGAGCTGTTGGACGTGGTCGCCATCGATGACGGCGGAGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGCCAGCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCAcc < 1:1817475/151‑1 (MQ=11) cccGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCAcc < 1:4006650/151‑1 (MQ=9) cccGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCAcc > 1:3189858/1‑151 (MQ=12) cccGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCAcc > 2:2207076/1‑151 (MQ=9) ggcccAGGCCAACGGCGAACTGCGGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGc < 2:2474111/147‑1 (MQ=12) gcacaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATc < 2:4874665/117‑1 (MQ=11) ccTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc < 1:3105945/151‑1 (MQ=14) caagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTg < 2:1636244/148‑1 (MQ=255) caagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTg > 1:4259810/4‑151 (MQ=255) aaagCCAACGGCGAACTGCGGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTg < 2:1038377/148‑1 (MQ=11) aCGGCGAGCTGCTGGACGTGGCCGCCAGCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATGACCGCGCCCGTGATCTCCGCCCCTGCCTCACCGACTGAGCTCGTGATCAAGGCCGACGTCAGCGTGGTCGCCGGCCGTGCCGAAcc > 2:849967/1‑151 (MQ=11) aCGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCAc > 2:3693699/1‑136 (MQ=255) ggCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCgg < 1:2971475/151‑1 (MQ=255) gCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCggg < 2:4505616/151‑1 (MQ=18) cGACCTGCTGAACGGGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgc < 2:1200250/151‑1 (MQ=11) gAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgca > 1:3881589/1‑151 (MQ=19) gAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgca < 2:4445785/151‑1 (MQ=255) ctgctgGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgcagca < 1:5227083/151‑1 (MQ=255) ctgGACGTGGTCGCGAGCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCg < 2:432032/151‑1 (MQ=255) gggACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGt < 2:1254315/150‑1 (MQ=255) gACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTAc > 1:5027662/1‑151 (MQ=21) cGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTAcgc > 1:227259/1‑151 (MQ=19) gTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTAcgcg > 1:4075995/1‑151 (MQ=255) gTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTAcgcg > 1:3684513/1‑151 (MQ=19) ggTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGTTGATCAATGCCGACGGCAGCGTGGTCACCGGCCCTGCCGAACCGGGCAGCACCGTACGCGTg > 1:4825749/1‑151 (MQ=255) ggTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCCGGCAGCACCGTACGCGTg > 2:3285298/1‑151 (MQ=255) cGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTg < 2:2811200/151‑1 (MQ=21) cATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGGTGGGGGTCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACTGGGCAGCACCGTACGCGTGCTGgcc > 1:2294784/1‑151 (MQ=11) cATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGgcc < 1:4473802/151‑1 (MQ=21) cATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGgcc > 1:4324854/1‑151 (MQ=18) aTCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGCCGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGgccg > 2:2449283/1‑151 (MQ=16) gATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCACTGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGccgccg > 2:532167/1‑151 (MQ=255) gATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGgccgccc > 2:1720511/1‑150 (MQ=255) gATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGccgccg < 1:3744867/151‑1 (MQ=255) aTGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGa < 1:3375665/151‑1 (MQ=255) aTGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGa > 2:4237247/1‑151 (MQ=18) gACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACg < 1:115988/151‑1 (MQ=255) ggcggcGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGca < 1:1971370/151‑1 (MQ=255) ggcgTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACCGcacca > 1:873655/1‑151 (MQ=255) gcgTTTCCTCGCTGCCCGCACACATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGcaccac > 2:4659150/1‑151 (MQ=255) tCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGc > 1:4548488/1‑151 (MQ=255) ccTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCt < 1:1077931/151‑1 (MQ=255) tcccTGCCCGCACAGCTCACCGCGCCCGACGTCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTgg < 2:3129987/148‑1 (MQ=11) gCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGt > 1:2426077/1‑151 (MQ=19) gCTGCCCGCACAGAGCACCGCGCCCGACCTCACCGCCCCTGCCGCACCGACCGAGCTGGGGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGt < 2:1962156/151‑1 (MQ=255) tGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAg < 2:1500043/151‑1 (MQ=255) ccGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGt < 1:4981219/151‑1 (MQ=255) ccGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGt < 2:2853548/151‑1 (MQ=19) cGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTg < 1:1858606/151‑1 (MQ=255) aGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGt > 2:3194200/1‑151 (MQ=255) aTCGCCGCGCCGGACATCAACGCCCCTGCCGCCCCGACCGAGCTGGTGATCGATGCCGACGGCGGCGTGGTCCCCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTg < 1:2070450/151‑1 (MQ=11) aTCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTg < 2:2924924/151‑1 (MQ=21) aCCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGgcg > 2:3947062/1‑151 (MQ=255) gcgcCCGACATCCCCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTa < 2:1920079/151‑1 (MQ=255) gcgcCCGACAGCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTa < 2:4604288/151‑1 (MQ=16) gcCCGACATCACCGCCCCTGCCGCACCGCCCGGGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc < 2:2105913/151‑1 (MQ=255) gcCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc > 2:2726525/1‑151 (MQ=255) gcCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc < 2:1883280/151‑1 (MQ=19) gcCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc > 2:1352337/1‑151 (MQ=255) cGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGc < 2:256862/151‑1 (MQ=255) cGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGc > 1:153333/1‑151 (MQ=255) gACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCa < 1:3285985/151‑1 (MQ=18) aCATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAg < 1:1015787/151‑1 (MQ=255) aCATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAg > 1:1322889/1‑151 (MQ=255) aCATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAg < 1:620940/151‑1 (MQ=255) cATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGc > 1:2553598/1‑151 (MQ=255) aTCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCt > 2:440778/1‑151 (MQ=255) aTCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCt > 2:3992824/1‑151 (MQ=255) aTCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCt > 2:381099/1‑151 (MQ=255) ccGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGGAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAg > 2:4067138/1‑151 (MQ=255) cGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGc > 1:164308/1‑151 (MQ=255) ccTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATcc > 2:3341938/1‑150 (MQ=255) ccTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCa < 2:5035837/151‑1 (MQ=19) ccGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCt > 1:4721733/1‑151 (MQ=255) accgaccgAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTAGAc > 1:4160207/1‑151 (MQ=16) ccgaccgaGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGAcc > 1:3572631/1‑151 (MQ=25) ccgaccgaGCGGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTAGAcc < 2:3017917/151‑1 (MQ=255) gAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc < 1:2815888/44‑1 (MQ=40) | CGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGACCCGCC > CP009974/1158262‑1158549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |