Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 181,839 C→T V62V (GTG→GTA)  RPPX_00810 ← phage head protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009974181,8390CT99.6% 835.7 / NA 223V62V (GTG→GTA) RPPX_00810phage head protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (116/106);  minor base G (0/1);  total (116/107)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 225 total aligned reads displayed.

CCCTCCGCGCGGAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGCACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGAACGGGTCGTG  >  CP009974/181692‑181985
                                                                                                                                                   |                                                                                                                                                  
cccTCCGCGCGGAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACt                                                                                                                                                 <  1:3863536/151‑1 (MQ=255)
cccTCCGCGCGGAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACt                                                                                                                                                 <  2:4981785/151‑1 (MQ=255)
  cTCCGCGCGGAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACACCCTCGAGCCGCCTGTAGCCCCGCGCTCGCAGTACTGa                                                                                                                                               >  2:111552/1‑151 (MQ=255)
     cgcgcgGAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCg                                                                                                                                            <  1:2987504/151‑1 (MQ=255)
       cgcgGAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGcc                                                                                                                                          <  1:4901898/151‑1 (MQ=255)
       cgcgGAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGcc                                                                                                                                          >  1:2702449/1‑151 (MQ=255)
        gcgGAGCAGGCAGGCAGGCGGTTGAACCCAGGCTATACAGGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCa                                                                                                                                         <  2:4490811/151‑1 (MQ=255)
          ggAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGc                                                                                                                                       >  1:1727457/1‑151 (MQ=255)
          ggAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGc                                                                                                                                       <  1:2619276/151‑1 (MQ=255)
             aCAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCggg                                                                                                                                    <  1:1011375/151‑1 (MQ=255)
             aCAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTCACCGCCAGCgcg                                                                                                                                    >  2:3644954/1‑149 (MQ=255)
                  caggcaggcGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAAt                                                                                                                               >  2:854541/1‑151 (MQ=255)
                   aggcaggcGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCCTGTCGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGactc                                                                                                                              >  2:3067242/1‑148 (MQ=255)
                        ggcGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGt                                                                                                                         <  1:2160264/151‑1 (MQ=255)
                        ggcGGTTGAACCCAGGCGATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGt                                                                                                                         <  2:3864241/151‑1 (MQ=255)
                              tGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTgctgct                                                                                                                   >  2:1410195/1‑151 (MQ=255)
                               gAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCtt                                                                                                                  >  2:523724/1‑151 (MQ=255)
                                aaCCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTc                                                                                                                 <  2:5116292/151‑1 (MQ=255)
                                 aCCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCg                                                                                                                >  2:3280147/1‑151 (MQ=255)
                                 aCCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCACGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCg                                                                                                                >  2:5063048/1‑151 (MQ=255)
                                   ccAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGAt                                                                                                              <  1:1255173/151‑1 (MQ=255)
                                    cAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATg                                                                                                             <  2:4229946/151‑1 (MQ=255)
                                       gCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCt                                                                                                          <  1:4760777/151‑1 (MQ=255)
                                         tataCATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTgc                                                                                                        >  2:3333319/1‑151 (MQ=255)
                                          ataCATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTgcg                                                                                                       >  1:3836898/1‑151 (MQ=255)
                                            gcATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCa                                                                                                     <  2:3742453/150‑1 (MQ=255)
                                             cATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAg                                                                                                    <  1:2027376/151‑1 (MQ=255)
                                                gACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAgcgc                                                                                                 <  1:4088437/151‑1 (MQ=255)
                                                gACCGCCGCTGCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAgcgc                                                                                                 <  2:2946420/151‑1 (MQ=255)
                                                 aCCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAgcgcg                                                                                                >  1:3691887/1‑151 (MQ=255)
                                                   cgccgcTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGcgcgcg                                                                                              <  1:1444320/151‑1 (MQ=255)
                                                    gccgcTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCgg                                                                                             <  2:1289436/151‑1 (MQ=255)
                                                     ccgcTTCGACAAACCGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGGAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGc                                                                                            <  2:1841906/151‑1 (MQ=255)
                                                     ccgcTTCGACAAAACGGACGTAGCACCCCCGCAAGGCACGCCCATGATCATGCCCGCCCACATCCTCGAGCCGCCCGTAGCCCCGCGCTCGCAGTACTGACCGCCACCGCGCGCATTCCCCTGCCGCCTCCCTGGCTCCGCAGcccgcgcc                                                                                            >  2:4675313/1‑149 (MQ=255)
                                                      cgcTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGcc                                                                                           >  1:3975700/1‑151 (MQ=255)
                                                      cgcTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGcc                                                                                           >  1:3592512/1‑151 (MQ=255)
                                                       gcTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCa                                                                                          >  2:611500/1‑151 (MQ=255)
                                                       gcTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCa                                                                                          <  1:714487/151‑1 (MQ=255)
                                                          tCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACtt                                                                                       <  2:335978/151‑1 (MQ=255)
                                                             aCAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCa                                                                                    >  2:4943876/1‑151 (MQ=255)
                                                             aCAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCa                                                                                    >  1:2423597/1‑151 (MQ=255)
                                                             aCAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCa                                                                                    >  2:4566946/1‑151 (MQ=255)
                                                              cAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCGCTTCCaa                                                                                   >  1:1175640/1‑151 (MQ=255)
                                                                  aCGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAagca                                                                               <  1:2324201/151‑1 (MQ=255)
                                                                    ggACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAagcagc                                                                             <  1:5180400/151‑1 (MQ=255)
                                                                     gACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCg                                                                            <  1:1282883/151‑1 (MQ=255)
                                                                       cGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTc                                                                          <  1:818612/151‑1 (MQ=255)
                                                                        gTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCa                                                                         <  2:3804619/151‑1 (MQ=255)
                                                                        gTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCa                                                                         >  1:1821164/1‑151 (MQ=255)
                                                                          aGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAACGCAGCGTCACt                                                                       >  2:3392663/1‑151 (MQ=255)
                                                                          aGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACt                                                                       <  1:2512610/151‑1 (MQ=255)
                                                                          aGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACt                                                                       >  1:772844/1‑151 (MQ=255)
                                                                          aGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACt                                                                       >  1:4423183/1‑151 (MQ=255)
                                                                             acacCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGAc                                                                    <  1:1177665/151‑1 (MQ=255)
                                                                             acacCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGAc                                                                    >  1:580224/1‑151 (MQ=255)
                                                                              cacCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACa                                                                   >  2:106411/1‑151 (MQ=255)
                                                                               acCCGCACGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAg                                                                  <  1:403233/151‑1 (MQ=255)
                                                                               acCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAg                                                                  >  2:2039997/1‑151 (MQ=255)
                                                                                cccGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGa                                                                 >  1:4191160/1‑151 (MQ=255)
                                                                                    ccaGGCACGCCCATGAGCAGGCCCGGCCACATCCTCGGGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACcgc                                                             <  2:1987802/149‑1 (MQ=255)
                                                                                      gggCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTGCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCgg                                                           <  1:4357232/150‑1 (MQ=255)
                                                                                       ggCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGc                                                          <  1:737501/151‑1 (MQ=255)
                                                                                          aCGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGt                                                       <  2:4997311/151‑1 (MQ=255)
                                                                                          aCGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGt                                                       <  2:5183739/151‑1 (MQ=255)
                                                                                           cGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGtt                                                      <  1:2814064/151‑1 (MQ=255)
                                                                                             cccATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGc                                                    <  1:963749/151‑1 (MQ=255)
                                                                                                  gATCAGGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTg                                               <  2:2191980/151‑1 (MQ=255)
                                                                                                   aTCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGc                                              >  1:2141753/1‑151 (MQ=255)
                                                                                                      aTGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCa                                           <  1:3214359/151‑1 (MQ=255)
                                                                                                       tGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCAc                                          >  1:4253349/1‑151 (MQ=255)
                                                                                                       tGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCAc                                          <  2:2099314/151‑1 (MQ=255)
                                                                                                       tGCCCGGCCACATCCTCGAGCCGCGTGTCGCTCCGCGCTCGCGGTACTGTACGCCGGCGGGCGATTCCCCGTGCTGCGTCGGCGGCTGCGCATCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCAc                                          <  2:5019911/151‑1 (MQ=255)
                                                                                                        gCCCGGCCACACCCTCGCGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACg                                         <  2:130073/151‑1 (MQ=255)
                                                                                                         cccGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGc                                        <  1:3067242/151‑1 (MQ=255)
                                                                                                            ggCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCAc                                          >  1:1548882/1‑146 (MQ=255)
                                                                                                            ggCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCAc                                          <  2:1548882/146‑1 (MQ=255)
                                                                                                              ccACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCt                                   >  1:1924978/1‑151 (MQ=255)
                                                                                                              ccACATCCGCGGGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCt                                   <  2:1439198/151‑1 (MQ=255)
                                                                                                                  aTCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCGGTTGCAGGTGCTCACGCAACCTGccc                               >  1:1334079/1‑151 (MQ=255)
                                                                                                                  aTCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGccc                               <  2:3200333/151‑1 (MQ=255)
                                                                                                                   tCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCa                              <  1:2793413/151‑1 (MQ=255)
                                                                                                                     cTCGAGCCGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGa                            >  2:354758/1‑151 (MQ=255)
                                                                                                                           ccGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCAcc                      >  2:1648379/1‑151 (MQ=255)
                                                                                                                            cGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCAccc                     <  2:3592512/151‑1 (MQ=255)
                                                                                                                            cGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCAccc                     >  1:558662/1‑151 (MQ=255)
                                                                                                                            cGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCAccc                     <  2:5095246/151‑1 (MQ=255)
                                                                                                                            cGCTTGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCAccc                     <  2:1221061/151‑1 (MQ=255)
                                                                                                                               ttGTAGCCCCGCGCTCGCAGTACTTACCGCCCGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCCCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCcgcc                  >  1:1194743/1‑150 (MQ=255)
                                                                                                                               ttGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCcgcg                  >  1:5210451/1‑151 (MQ=255)
                                                                                                                               ttGTAGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCcgcg                  >  2:1924572/1‑151 (MQ=255)
                                                                                                                                  tAGCCCCGCGCTCGCAGGACTGACCGCCAGCGGGCGCATTCCCGTGCTGCTTCGATGGCGGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGGTCCACCCGCGGcc               <  2:2488416/151‑1 (MQ=255)
                                                                                                                                   aGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCa              >  1:5107198/1‑151 (MQ=255)
                                                                                                                                   aGCCCCGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCa              <  1:611500/151‑1 (MQ=255)
                                                                                                                                      cccGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGaa           >  1:4967164/1‑151 (MQ=255)
                                                                                                                                      cccGCGCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGaa           >  1:2201429/1‑151 (MQ=255)
                                                                                                                                        cgcgCTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGAACg         <  1:346373/151‑1 (MQ=255)
                                                                                                                                          cgcTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGAACggg       <  1:4578185/151‑1 (MQ=255)
                                                                                                                                            cTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGACCGGGTc     >  2:692668/1‑151 (MQ=255)
                                                                                                                                            cTCGCAGTACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGAACGGGTc     <  2:3975700/151‑1 (MQ=255)
                                                                                                                                               gcagtaCTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGAACGGGTCGTg  >  2:4472894/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CCCTCCGCGCGGAACAGGCAGGCAGGCGGTTGAACCCAGGCTATACATGACCGCCGCTTCGACAAAACGGACGTAGCACACCCGCAAGGCACGCCCATGATCATGCCCGGCCACATCCTCGAGCCGCTTGTAGCCCCGCGCTCGCAGCACTGACCGCCAGCGGGCGAATTCCCGTGCTGCTTCGATGGCTGCGCAGCGCGCGGCCACTTCCAAAGCAGCGTCACTGACAGACCGCGGCAGTTGCAGGTGCTCACGCAACCTGCCCAGATCCACCCGCGGCCAGAACGGGTCGTG  >  CP009974/181692‑181985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑