Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,358,523 C→A intergenic (+384/+2306) RPPX_05970 → / ← RPPX_05980 hypothetical protein/tRNA‑Thr

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,358,5230CA100.0% 843.4 / NA 241intergenic (+384/+2306)RPPX_05970/RPPX_05980hypothetical protein/tRNA‑Thr
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (110/131);  total (110/131)

Only 100 of 241 total aligned reads displayed.

GGACTGGCGGCTCCTTACGTCCGGGAGCAAGGGCATCTCATGATCTGGCCTCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACCGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTGC  >  CP009974/1358375‑1358669
                                                                                                                                                    |                                                                                                                                                  
ggACTGGCGGCTCCTTAAGACCAGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAgg                                                                                                                                                  <  2:255016/151‑1 (MQ=14)
  aCTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAgggg                                                                                                                                                <  1:1719971/151‑1 (MQ=14)
   cTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGc                                                                                                                                               <  1:92276/151‑1 (MQ=14)
     ggcggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCAt                                                                                                                                             <  2:4433509/151‑1 (MQ=14)
      gcggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATg                                                                                                                                            <  2:1438453/151‑1 (MQ=14)
      gcggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATg                                                                                                                                            <  1:1237994/151‑1 (MQ=14)
        ggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCATTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGcc                                                                                                                                          >  1:2297584/1‑151 (MQ=14)
        ggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGcc                                                                                                                                          <  1:4103098/151‑1 (MQ=14)
        ggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGcc                                                                                                                                          <  1:2913366/151‑1 (MQ=14)
             cttaagaccGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACt                                                                                                                                     >  1:4580623/8‑151 (MQ=14)
             cTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCCCTGCGATGACAGGGGCATGCCTGACt                                                                                                                                     >  1:3204733/1‑151 (MQ=14)
                   accGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgtcagg                                                                                                                               >  2:1490699/2‑150 (MQ=255)
                   accGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGAGTTCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTgtcagt                                                                                                                               >  2:586322/2‑151 (MQ=14)
                      gggAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGCGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGtcagtcag                                                                                                                            <  1:3075190/151‑1 (MQ=255)
                      gggAGCAAGGGCATCTCATGATCTGGCTCCATGAGCACCGTTACCGGTGAGCGGGTGGAGGCTGCATTGGCTGACGACACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGtcagtcag                                                                                                                            <  1:2030485/151‑1 (MQ=14)
                           cAAGGGCATCGCATGATCTGGCTGCCTGAGCAGCGTTGCCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGGGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCa                                                                                                                       <  2:1053341/151‑1 (MQ=14)
                              gggCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTc                                                                                                                    >  2:321946/1‑151 (MQ=255)
                              gggCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTc                                                                                                                    >  2:4824952/1‑151 (MQ=255)
                               ggCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTcc                                                                                                                   >  1:822493/1‑151 (MQ=255)
                                gCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTTAGGTGCAGTCCa                                                                                                                  >  1:906359/1‑151 (MQ=255)
                                  aTCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGTCGAGAACAGTGCCGCGAGATCTTGTGCCGGGTGCATGCTGCACTGCGATGTCAGGGGCATGCCTGATTATCAGTCACGTGCAGTCCAtt                                                                                                                >  2:2483307/1‑151 (MQ=14)
                                  aTCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCAtt                                                                                                                <  1:3723075/151‑1 (MQ=255)
                                   tctcATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTc                                                                                                               <  1:4610159/151‑1 (MQ=255)
                                      cATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCtt                                                                                                            >  2:1897039/1‑151 (MQ=255)
                                      cATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCtt                                                                                                            <  1:1565847/151‑1 (MQ=255)
                                        tGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTgg                                                                                                          <  1:2000185/151‑1 (MQ=255)
                                        tGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTgg                                                                                                          >  1:1025088/1‑151 (MQ=255)
                                          aTCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTc                                                                                                        <  1:3971505/151‑1 (MQ=255)
                                            ctggctccctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTg                                                                                                      <  1:1057642/144‑1 (MQ=255)
                                                 tccctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCa                                                                                                 >  2:248758/3‑151 (MQ=255)
                                                 tccctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCa                                                                                                 >  1:88472/3‑151 (MQ=255)
                                                    ctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACca                                                                                              <  1:1164435/151‑1 (MQ=255)
                                                       aGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTCCAGTCCCTTCCTTGGTCTGCAGCACcatca                                                                                           >  2:3426511/1‑151 (MQ=255)
                                                        gCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACcatcat                                                                                          <  2:663603/151‑1 (MQ=255)
                                                           ccGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTa                                                                                       >  1:1465964/1‑151 (MQ=255)
                                                            cGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTAc                                                                                      <  1:2226055/151‑1 (MQ=255)
                                                            cGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTAc                                                                                      >  2:3320358/1‑151 (MQ=255)
                                                              ttACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACaa                                                                                    <  2:2128724/151‑1 (MQ=255)
                                                              ttACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACaa                                                                                    >  1:1525701/1‑151 (MQ=255)
                                                                aCCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACg                                                                                  >  2:4641190/1‑151 (MQ=255)
                                                                aCCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGAGCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACg                                                                                  <  2:2103742/151‑1 (MQ=255)
                                                                   ggTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTg                                                                               >  1:408359/1‑151 (MQ=255)
                                                                   ggTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTg                                                                               <  2:2275064/151‑1 (MQ=255)
                                                                   ggTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATAATATACAACGCtc                                                                               >  2:4851571/1‑150 (MQ=255)
                                                                     tGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGtt                                                                             >  1:3750399/1‑151 (MQ=255)
                                                                     tGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGtt                                                                             <  1:3253828/151‑1 (MQ=255)
                                                                     tGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGtt                                                                             >  2:4380207/1‑151 (MQ=255)
                                                                      gggCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTg                                                                            <  1:3539089/151‑1 (MQ=255)
                                                                       ggCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGc                                                                           <  2:3534570/151‑1 (MQ=255)
                                                                       ggCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACCCTGTTGc                                                                           >  2:4755711/1‑151 (MQ=255)
                                                                         cGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTg                                                                         <  1:5128270/151‑1 (MQ=255)
                                                                             tGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGa                                                                     <  1:4796088/151‑1 (MQ=255)
                                                                              ggAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGAc                                                                    <  1:2778284/151‑1 (MQ=255)
                                                                                aGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACAt                                                                  <  2:4325322/151‑1 (MQ=255)
                                                                                aGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACAt                                                                  >  2:1936217/1‑151 (MQ=255)
                                                                                   cTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCgg                                                               >  2:4170494/1‑151 (MQ=255)
                                                                                    tGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGc                                                              <  1:3321366/151‑1 (MQ=255)
                                                                                    tGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCCGTTGCTGGTGACATCGGc                                                              >  2:2117314/1‑151 (MQ=255)
                                                                                    tGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATACAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGc                                                              <  1:3642700/151‑1 (MQ=255)
                                                                                      cATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCTGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGt                                                            >  1:67414/1‑151 (MQ=255)
                                                                                       aTTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGTGCGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGTCACAATCATCTACAACGCTGTTGCTGGTGACATCGCCGtt                                                           <  2:3923560/151‑1 (MQ=11)
                                                                                           gCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTc                                                       <  1:3589976/151‑1 (MQ=255)
                                                                                            cTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCa                                                      <  1:605205/151‑1 (MQ=255)
                                                                                              gACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACg                                                    >  1:1677097/1‑151 (MQ=255)
                                                                                                    aCCGGTGCCGCGAGATCCTGAGACGGGTGCATGCAGAACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGAtt                                              <  2:3267277/151‑1 (MQ=255)
                                                                                                       aGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTc                                           >  2:855481/1‑151 (MQ=255)
                                                                                                          gCCGCGAGATCCTGAGCCGAGTGCATGCAGCACTGCGATGACAGCGGCATGCCTGACTGGCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCGGTTGCTGGGGACATCGGCGTGTGGCACGCCGATTCTCAcc                                        >  2:2662783/1‑150 (MQ=14)
                                                                                                           ccGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACACCGGCGTGTGTCGCGCCGATTCTCAcca                                       >  2:4606105/1‑149 (MQ=14)
                                                                                                           ccGCCAGCTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCCGGTGCACTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCTCGCCGATTGTCACGa                                       <  2:2678996/151‑1 (MQ=14)
                                                                                                              cgAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTg                                    <  2:1677097/151‑1 (MQ=255)
                                                                                                              cgAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATAGGCGTTTGCCACGCCGATTGTCACGAGTg                                    >  2:4201966/1‑151 (MQ=255)
                                                                                                               gagaTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTgg                                   >  1:4989859/1‑151 (MQ=255)
                                                                                                                agaTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGa                                  >  2:1746239/1‑151 (MQ=255)
                                                                                                                  aTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGt                                <  1:66222/151‑1 (MQ=255)
                                                                                                                   tCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTa                               <  2:822493/151‑1 (MQ=255)
                                                                                                                    ccTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAg                              >  2:2340064/1‑151 (MQ=255)
                                                                                                                      tGAGCGGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGcc                            <  2:1362894/151‑1 (MQ=255)
                                                                                                                      tGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGcc                            <  2:4947476/151‑1 (MQ=255)
                                                                                                                      tGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGcc                            <  2:1463376/151‑1 (MQ=255)
                                                                                                                      tGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGCGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGcc                            >  1:4833315/1‑151 (MQ=255)
                                                                                                                       gAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCg                           >  2:2814663/1‑151 (MQ=255)
                                                                                                                       gAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCg                           <  1:1430425/151‑1 (MQ=255)
                                                                                                                        aGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGc                          <  1:519597/151‑1 (MQ=255)
                                                                                                                          ccGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCan                        <  1:4389181/151‑2 (MQ=255)
                                                                                                                           cGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCaaa                       <  1:2396364/151‑1 (MQ=255)
                                                                                                                           cGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCaaa                       >  1:2639874/1‑151 (MQ=255)
                                                                                                                            gggTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAg                      >  2:2944984/1‑151 (MQ=255)
                                                                                                                                gcatgcaGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCAt                  >  1:339678/1‑151 (MQ=255)
                                                                                                                                  atgcaGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCAtgt                >  1:1652343/1‑151 (MQ=255)
                                                                                                                                    gcagcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGc              <  1:586322/151‑1 (MQ=255)
                                                                                                                                    gcagcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGc              >  1:3229659/1‑151 (MQ=255)
                                                                                                                                     cagcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCg             <  1:1177435/151‑1 (MQ=255)
                                                                                                                                     cagcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCg             <  1:18016/151‑1 (MQ=255)
                                                                                                                                      agcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGa            <  2:117022/151‑1 (MQ=255)
                                                                                                                                       gcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGAt           <  2:4989859/151‑1 (MQ=255)
                                                                                                                                           tGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAgg       <  2:5174919/151‑1 (MQ=255)
                                                                                                                                            gCGATGACAGGGGCATGCCTGACTGTCAGTAAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGGTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAggg      >  2:3124422/1‑151 (MQ=255)
                                                                                                                                              gATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCt    >  1:4253762/1‑151 (MQ=255)
                                                                                                                                              gATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCt    >  2:1883196/1‑151 (MQ=255)
                                                                                                                                               aTGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTg   <  1:4622909/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GGACTGGCGGCTCCTTACGTCCGGGAGCAAGGGCATCTCATGATCTGGCCTCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACCGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTGC  >  CP009974/1358375‑1358669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑