Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,493,312 G→A G34G (GGC→GGT)  RPPX_06585 ← MFS transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,493,3120GA99.3% 973.8 / ‑5.3 271G34G (GGC→GGT) RPPX_06585MFS transporter
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (146/121);  total (147/124)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 275 total aligned reads displayed.

AGGCAGTGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCGCCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGCCCAGCATGTGGCCCA  >  CP009974/1493164‑1493459
                                                                                                                                                    |                                                                                                                                                   
ggggaGTGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCaccacc                                                                                                                                                   <  2:4694132/147‑1 (MQ=255)
 ggCAGTGGCTGCTTCGGCCGTACCGAGCGCCGGGGGGGTGGCAATAATTGCGCGCTGGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACAGCGGGATCAGTGCATCACCAccc                                                                                                                                                  <  2:4746994/151‑1 (MQ=255)
    aGTGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCa                                                                                                                                               <  1:1231955/151‑1 (MQ=255)
    aGTGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCa                                                                                                                                               <  1:2654259/151‑1 (MQ=255)
    aGTGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCa                                                                                                                                               <  1:4477/151‑1 (MQ=255)
     gTGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCaa                                                                                                                                              >  1:3931884/1‑151 (MQ=255)
     gTGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCaa                                                                                                                                              >  1:4414163/1‑151 (MQ=255)
      tGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCaaa                                                                                                                                             >  1:3265174/1‑151 (MQ=255)
      tGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCaaa                                                                                                                                             <  1:1617374/151‑1 (MQ=255)
       ggCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAg                                                                                                                                            <  2:1209190/151‑1 (MQ=255)
           tcttcGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGccc                                                                                                                                        >  1:2160237/1‑151 (MQ=255)
             ttcGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCaa                                                                                                                                      >  1:465243/1‑151 (MQ=255)
                  ccGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCAt                                                                                                                                 <  2:2019973/151‑1 (MQ=255)
                  ccGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCAt                                                                                                                                 <  2:1829953/151‑1 (MQ=255)
                   cGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATg                                                                                                                                >  2:2712458/1‑151 (MQ=255)
                    gTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCCAAGGCCCAAGCCATgc                                                                                                                               >  2:4378727/1‑150 (MQ=255)
                       ccGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCGGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTg                                                                                                                            >  2:3277462/1‑151 (MQ=255)
                        cGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTgg                                                                                                                           >  1:537833/1‑151 (MQ=255)
                         gAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGc                                                                                                                          >  2:3787669/1‑151 (MQ=255)
                         gAGCACCAAAGAGGTGGCAATAAGTCCGCACTTGTAGGCACCGAAGCGCGACATGCTGAGGAACTTGCGGGCTGCACCGGCGATGAACAGTGGCATGCCCAACACCGGGACCAGTGCATCACCACCTCCAAAGGCCCAAGCCATGACTgac                                                                                                                          >  2:3037713/1‑149 (MQ=255)
                           gCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAg                                                                                                                        >  1:4955247/1‑151 (MQ=255)
                            cACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGc                                                                                                                       <  1:485232/151‑1 (MQ=255)
                             aCCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCg                                                                                                                      >  1:2311391/1‑151 (MQ=255)
                                 ttGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCAc                                                                                                                  >  1:1280430/1‑151 (MQ=255)
                                  tGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCAcc                                                                                                                 <  2:1159144/151‑1 (MQ=255)
                                   gAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCa                                                                                                                <  1:1688557/151‑1 (MQ=255)
                                    aGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAg                                                                                                               <  1:4824543/151‑1 (MQ=255)
                                      gTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGc                                                                                                             >  2:1032981/1‑151 (MQ=255)
                                          cAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCAc                                                                                                         <  2:2887990/151‑1 (MQ=255)
                                           aaTAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCAcc                                                                                                        >  1:3347666/1‑151 (MQ=255)
                                            aTAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCg                                                                                                       >  1:5154401/1‑151 (MQ=255)
                                                  gcgcgcTTGTAGGGACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGt                                                                                                 <  1:5040725/151‑1 (MQ=255)
                                                   cgcgcTTGTAGGCACCGAAGGCAGGCAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTa                                                                                                <  2:5084722/151‑1 (MQ=255)
                                                    gcgcTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTAc                                                                                               >  1:2595532/1‑151 (MQ=255)
                                                     cgcTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACt                                                                                              <  1:47143/151‑1 (MQ=255)
                                                     cgcTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACt                                                                                              >  2:890225/1‑151 (MQ=255)
                                                      gcTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTg                                                                                             <  1:923618/151‑1 (MQ=255)
                                                       cTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCGCCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGc                                                                                            <  2:4033372/151‑1 (MQ=255)
                                                       cTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGc                                                                                            >  2:3106597/1‑151 (MQ=255)
                                                       cTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGc                                                                                            <  2:3772751/151‑1 (MQ=255)
                                                        ttGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGcc                                                                                           >  1:870102/1‑151 (MQ=255)
                                                         tGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGcca                                                                                          >  1:5012546/1‑151 (MQ=255)
                                                            aGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGccacca                                                                                       >  1:4796967/1‑151 (MQ=255)
                                                                aCCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGgcc                                                                                   >  1:2986680/1‑151 (MQ=255)
                                                                   gAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCAc                                                                                                                  <  2:525782/117‑1 (MQ=255)
                                                                   gAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGgccagc                                                                                >  2:4960092/1‑151 (MQ=255)
                                                                   gAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGgccagc                                                                                >  1:4281345/1‑151 (MQ=255)
                                                                   gAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGgccagc                                                                                <  2:4615929/151‑1 (MQ=255)
                                                                    aaGCGCGACAGGCTGAGGAACATTGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATTAGTGCACCACCACCTCCAAAGGCCCAAGCCACGACTGGCAGCGGCACCAGGCCCACCGCCAGGGACTGCCACTAGgccaggg                                                                               >  2:1494617/1‑149 (MQ=255)
                                                                    aaGCGCGACAGGCTGAAGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGgccagcg                                                                               <  2:511926/151‑1 (MQ=255)
                                                                       cgcgACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGgccagcgcca                                                                            <  1:817506/151‑1 (MQ=255)
                                                                           aCAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAgccg                                                                        >  1:1889371/1‑151 (MQ=255)
                                                                           aCAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAgccg                                                                        <  2:58887/151‑1 (MQ=255)
                                                                            cAGGCTGAGGAACATGGTTGCCGCACCGGCCATGAACAGTGGCATGGCCAACACCGTGATCAGTGCATCACCACCCCCAAAGGACCAAGCCATGACTGTCAGCGCCACCAGACCCACCGCCAGGCACTGCCACCAGGCCAGCGCCAgcccc                                                                       >  2:624944/1‑149 (MQ=255)
                                                                             aGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAgccgcc                                                                      <  1:2187496/151‑1 (MQ=255)
                                                                               gCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCcgccgc                                                                    >  1:5054128/1‑151 (MQ=255)
                                                                                  gAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTg                                                                 <  1:3601511/151‑1 (MQ=255)
                                                                                   aGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGa                                                                <  1:4691210/151‑1 (MQ=255)
                                                                                       aCATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTc                                                            >  1:1464967/1‑151 (MQ=255)
                                                                                        cATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCg                                                           <  1:2637232/151‑1 (MQ=255)
                                                                                         aTGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCgg                                                          <  1:1057564/151‑1 (MQ=255)
                                                                                          tggtggCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGgc                                                         <  1:2985047/151‑1 (MQ=255)
                                                                                           ggtggCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGgcg                                                        <  1:2113498/151‑1 (MQ=255)
                                                                                            gtggCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGgcgc                                                       >  2:3179632/1‑151 (MQ=255)
                                                                                              ggCCGCACCGGCGATGAAAAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCgg                                                     <  2:1362629/151‑1 (MQ=255)
                                                                                               gCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCggg                                                    <  2:2160237/151‑1 (MQ=255)
                                                                                                ccGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGt                                                   <  1:4338068/151‑1 (MQ=255)
                                                                                                 cGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTc                                                  <  2:2814350/151‑1 (MQ=255)
                                                                                                 cGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGCTc                                                  >  2:4670522/1‑151 (MQ=255)
                                                                                                 cGCACCGGCGATGAAAAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTc                                                  <  1:332004/151‑1 (MQ=255)
                                                                                                  gCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCa                                                 >  1:3134720/1‑151 (MQ=255)
                                                                                                   cACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCAc                                                <  1:3844577/151‑1 (MQ=255)
                                                                                                    aCCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACg                                               >  2:2571501/1‑151 (MQ=255)
                                                                                                     ccGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGc                                              <  1:712195/151‑1 (MQ=255)
                                                                                                       ggCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCt                                            >  2:2503179/1‑151 (MQ=255)
                                                                                                        gCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTg                                           <  2:5224957/151‑1 (MQ=255)
                                                                                                          gATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTggg                                         >  1:1196045/1‑151 (MQ=255)
                                                                                                          gATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTggg                                         >  1:1732652/1‑151 (MQ=255)
                                                                                                          gATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGCCACGCCTggg                                         >  1:4154664/1‑151 (MQ=255)
                                                                                                            tGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGc                                       <  2:4816886/151‑1 (MQ=255)
                                                                                                              aaCAGTGGCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGCCCTCGGCGCGGCTCACCCCCGGGGCAc                                     >  2:3653234/1‑151 (MQ=255)
                                                                                                                    ggCATGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGcc                               >  1:118830/1‑151 (MQ=255)
                                                                                                                       aTGGCCAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTg                            >  2:1775797/1‑151 (MQ=255)
                                                                                                                        tGGCCAACACCGGGAGCAGTGCATCACCACCCCCAAGGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTgg                           <  1:3556246/151‑1 (MQ=255)
                                                                                                                           ccAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGgtgt                        <  1:1084041/151‑1 (MQ=255)
                                                                                                                           ccAACACCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGgtgt                        >  2:3699619/1‑151 (MQ=255)
                                                                                                                               cacCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGt                    <  1:2890159/151‑1 (MQ=255)
                                                                                                                               cacCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGt                    <  2:962971/151‑1 (MQ=255)
                                                                                                                                acCGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGtt                   >  2:1441588/1‑151 (MQ=255)
                                                                                                                                 ccGGGACCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTg                  <  2:3333612/151‑1 (MQ=255)
                                                                                                                                  cGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGc                 <  1:3744944/151‑1 (MQ=255)
                                                                                                                                  cGGGATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCCCCGGTCACGCCTGGGGCACCTCGCCCCGGCGTCCGTCGc                 >  2:2312336/1‑151 (MQ=255)
                                                                                                                                   gggATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGcc                >  2:3328225/1‑151 (MQ=255)
                                                                                                                                    ggATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGccc               <  2:4450538/151‑1 (MQ=255)
                                                                                                                                     gATCAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGCCCa              <  2:1273742/151‑1 (MQ=255)
                                                                                                                                        cAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGCCCAGCa           <  2:3931884/151‑1 (MQ=255)
                                                                                                                                        cAGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGCCCAGCa           <  2:1003908/151‑1 (MQ=255)
                                                                                                                                         aGTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGCCCAGCAt          >  1:1640962/1‑151 (MQ=255)
                                                                                                                                          gTGCATCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGCCCAGCAtg         <  1:617046/151‑1 (MQ=255)
                                                                                                                                               tCACCACCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGCCCAGCATGTGGcc    <  1:656397/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AGGCAGTGGCTTCTTCGCCCGTACCGAGCACCTTTGAGGTGGCAATAAGTGCGCGCTTGTAGGCACCGAAGCGCGACAGGCTGAGGAACATGGTGGCCGCACCGGCGATGAACAGTGGCATGGCCAACACCGGGATCAGTGCATCACCGCCCCCAAAGGCCCAAGCCATGACTGGCAGCGGCACCAGGCCCACCGCCAGGTACTGCCACCAGGCCAGCGCCAGCCGCCGCTTGACCTCGGCGCGGGTCACGCCTGGGGCACCTCGCCCTGGTGTTCGTTGCCCAGCATGTGGCCCA  >  CP009974/1493164‑1493459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑