BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	1,554,990	A→G	D139D (GAT→GAC)	tuf ←	elongation factor Tu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	1,554,990	0	A	G	100.0%	499.6 / NA	179	D139D (GAT→GAC)	tuf	elongation factor Tu
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (88/91); total (88/91)

Only 100 of 179 total aligned reads displayed.

CATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGATCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTC  >  CP009974/1554876‑1555137

cATACGAGCGGAACCGGTGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGGCAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACg                                                                                                                 <  2:4909118/151‑1 (MQ=2)

    cGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTa                                                                                                             >  2:5051481/1‑151 (MQ=14)

     gAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGGCCACGATGTACGGAACGCCTAc                                                                                                            <  2:4649532/151‑1 (MQ=17)

     gAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTAc                                                                                                            >  1:3795116/1‑151 (MQ=14)

      aGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTAcc                                                                                                           <  1:2546441/151‑1 (MQ=17)

       gCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCt                                                                                                          <  1:1121862/151‑1 (MQ=17)

        cGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTg                                                                                                         >  1:4554195/1‑151 (MQ=17)

              cGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGa                                                                                                   >  2:2951156/1‑151 (MQ=14)

                 tgatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcag                                                                                                <  1:1368475/151‑1 (MQ=17)

                  gatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagc                                                                                               >  1:1117606/1‑151 (MQ=17)

                   atgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagca                                                                                              >  1:690117/1‑151 (MQ=14)

                   aggatCGGAGTGTCGGCGCCTGGGGAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagca                                                                                              <  2:4066909/149‑1 (MQ=255)

                    tgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagcag                                                                                             >  2:3025011/1‑151 (MQ=14)

                     gatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAgg                                                                                            <  1:4086340/151‑1 (MQ=17)

                      atCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGa                                                                                           >  2:563767/1‑151 (MQ=17)

                       tCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAt                                                                                          >  1:1691863/1‑151 (MQ=17)

                        cGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtg                                                                                         >  2:2258542/1‑151 (MQ=17)

                           aGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGc                                                                                      >  1:1038710/1‑151 (MQ=17)

                               tcgtcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCAc                                                                                  <  1:322560/151‑1 (MQ=17)

                                  tcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACggg                                                                               >  1:2423285/1‑151 (MQ=14)

                                   cgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGt                                                                              >  1:5037420/1‑151 (MQ=17)

                                    gCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGtt                                                                             <  2:4128042/151‑1 (MQ=17)

                                    gCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGtt                                                                             <  1:3417280/151‑1 (MQ=17)

                                    gCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACGTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGtt                                                                             <  2:675876/151‑1 (MQ=17)

                                      cTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtg                                                                           <  1:1293415/151‑1 (MQ=17)

                                      cTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtg                                                                           >  1:2993371/1‑151 (MQ=17)

                                       tGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgt                                                                          <  1:2217704/151‑1 (MQ=18)

                                       tGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTAACAGGTCAGACTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGAACAGCAGGATGTGCTCACGGGttcgc                                                                          >  2:2853393/1‑148 (MQ=255)

                                        gggAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgtg                                                                         <  2:3350026/151‑1 (MQ=18)

                                         ggAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTgg                                                                        <  2:1915897/151‑1 (MQ=18)

                                          gAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGc                                                                       <  2:3299427/151‑1 (MQ=21)

                                           aaGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCa                                                                      <  1:2944030/151‑1 (MQ=21)

                                            aGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCAt                                                                     >  1:3352403/1‑151 (MQ=25)

                                            aGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCAt                                                                     <  1:1546855/151‑1 (MQ=25)

                                             gTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATc                                                                    <  1:1605291/151‑1 (MQ=25)

                                              tCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCg                                                                   <  2:1514143/151‑1 (MQ=25)

                                               cGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCgg                                                                  >  1:3141975/1‑151 (MQ=21)

                                               cGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCgg                                                                  <  1:973375/151‑1 (MQ=25)

                                                 tAGGTGGACAGCATGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGAc                                                                <  2:2488377/151‑1 (MQ=25)

                                                 tAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGAc                                                                >  1:1505508/1‑151 (MQ=25)

                                                 tAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGAc                                                                <  1:694539/151‑1 (MQ=25)

                                                 tAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGAc                                                                >  2:5226555/1‑151 (MQ=18)

                                                       gACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcgg                                                          <  1:1433357/151‑1 (MQ=25)

                                                        aCAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggc                                                         <  1:1141568/151‑1 (MQ=25)

                                                         cagcagGTCGCGAACTTCCAGCTCGACCAGTTCCAGCAGCGCAGCGTCGTCTACCAGGTCAGCCGTGTTCAGGAAGACCACGATGTACGGAACGCCGACCTGACAGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcg                                                        <  2:4168738/151‑1 (MQ=11)

                                                          agcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcgg                                                       <  2:4501664/151‑1 (MQ=25)

                                                              ggTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCgg                                                   >  1:634241/1‑150 (MQ=25)

                                                              ggTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGa                                                   <  2:537130/151‑1 (MQ=25)

                                                              ggTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGa                                                   <  1:2567789/151‑1 (MQ=25)

                                                               gTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAg                                                  <  2:313192/151‑1 (MQ=25)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAc                                             >  1:4120156/1‑151 (MQ=25)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAc                                             >  2:3344708/1‑151 (MQ=21)

                                                                     aaCTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAcc                                            >  1:4768876/1‑151 (MQ=25)

                                                                     aaCTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAcc                                            >  1:2811330/1‑151 (MQ=25)

                                                                      aCTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCa                                           >  1:260144/1‑151 (MQ=21)

                                                                      aCTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCa                                           >  1:3944059/1‑151 (MQ=25)

                                                                       cTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAg                                          >  1:3473711/1‑151 (MQ=18)

                                                                        ttCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAgg                                         <  2:2025997/151‑1 (MQ=25)

                                                                        ttCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAgg                                         >  1:3686686/1‑151 (MQ=18)

                                                                        ttCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAgg                                         >  1:3350250/1‑151 (MQ=21)

                                                                          ccATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGAt                                       <  2:1436358/151‑1 (MQ=25)

                                                                          ccATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGAt                                       <  1:530414/151‑1 (MQ=21)

                                                                           cATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATc                                      <  2:3058462/151‑1 (MQ=25)

                                                                           cATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATc                                      <  1:1508691/151‑1 (MQ=25)

                                                                           cATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATc                                      >  2:464724/1‑151 (MQ=21)

                                                                            aTCTCGACCTGTTCCAGCAGCTCAGCGTCGTCTACCACGTCAGCCTTGTTCAGGAAGACCACGATGTACGGATCGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTCGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     <  2:4108074/151‑1 (MQ=11)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     <  1:518736/151‑1 (MQ=37)

                                                                                cGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGcc                                 <  2:1677694/151‑1 (MQ=255)

                                                                                 gACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCg                                >  2:3759474/1‑151 (MQ=255)

                                                                                        tgcagcagCACAGCGTCGTGCACCAGGTCAGCGATGTTCAGGAAGTCCACGTTGTGCGGAACGCTTGCCTGACGGGACAGCAGGATGTGGTTACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCt                         <  2:4788754/149‑1 (MQ=14)

                                                                                        tCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATcg                         >  2:1320609/1‑150 (MQ=255)

                                                                                            gcagcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgc                     <  1:3603507/151‑1 (MQ=255)

                                                                                             cagcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGTCGTCCATCTGGgca                    >  2:238636/1‑151 (MQ=255)

                                                                                             cagcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgca                    >  1:1965393/1‑151 (MQ=255)

                                                                                             cagcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgca                    <  1:27263/151‑1 (MQ=255)

                                                                                              agcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcag                   <  2:1819308/151‑1 (MQ=255)

                                                                                               gcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcagc                  >  1:4399604/1‑151 (MQ=255)

                                                                                                  cAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCCGCGCCCGCGCAAACCAGGATCGCGCCGGCCATCTGGGCAGCAcc               >  2:3188499/1‑151 (MQ=255)

                                                                                                   aGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCg              <  1:163007/151‑1 (MQ=255)

                                                                                                   aGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCg              >  1:997577/1‑151 (MQ=255)

                                                                                                    gCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCgg             <  1:3995860/151‑1 (MQ=255)

                                                                                                     cgtcgtCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCAGGGGATTGTGGCATCGGACCATCGGCGGCCGAGGAAACCAGGACCGCGGCGTCCATCTGGGCAGCACCggg            >  2:1742138/1‑150 (MQ=14)

                                                                                                     cgtcgtCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGt            <  1:1490318/151‑1 (MQ=255)

                                                                                                     cgtcgtCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGt            <  1:4642907/151‑1 (MQ=255)

                                                                                                     cgtcgtCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTCACGGGACAGCAGGATGTGCTCACGCGCTTGTGGCCTCGGACCATCGGCGGCCGCGCAAACCAGGATCGCGCCCTCCTTCTGCGCAGCACCggc            >  2:1599002/1‑150 (MQ=14)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTg           >  1:49518/1‑151 (MQ=255)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTg           <  2:2568483/151‑1 (MQ=255)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTg           <  2:2568330/151‑1 (MQ=255)

                                                                                                         gtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATc        >  2:1215168/1‑151 (MQ=255)

                                                                                                          tcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCa       >  1:427055/1‑151 (MQ=255)

                                                                                                          tcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCa       >  2:1960381/1‑151 (MQ=255)

                                                                                                          tcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCCGGGCAGCACCGGTGATCa       >  1:944266/1‑151 (MQ=255)

                                                                                                           cTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCAt      <  1:1058677/151‑1 (MQ=255)

                                                                                                           cTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCAt      <  2:4233177/151‑1 (MQ=255)

                                                                                                           cTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCAt      <  1:591096/151‑1 (MQ=255)

                                                                                                             aCCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGt    >  2:391457/1‑151 (MQ=255)

                                                                                                             aCCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGt    >  1:4218901/1‑151 (MQ=255)

                                                                                                              ccAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGtt   <  1:3311712/151‑1 (MQ=255)

                                                                                                              ccAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGtt   <  2:761307/151‑1 (MQ=255)

                                                                                                               cAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGttc  >  1:1736423/1‑151 (MQ=255)

CATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGATCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTC  >  CP009974/1554876‑1555137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`