| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,406,966 | +T | intergenic (+325/‑1049) | RPPX_15185 → / → RPPX_15195 | chemotaxis protein CheY/peptide chain release factor 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,406,966 | 1 | . | T | 99.4% | 1220.9 / NA | 323 | intergenic (+325/‑1049) | RPPX_15185/RPPX_15195 | chemotaxis protein CheY/peptide chain release factor 2 |
| Reads supporting (aligned to +/- strand): ref base . (0/1); major base T (163/156); minor base G (1/1); total (164/159) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 335 total aligned reads displayed.
ATCGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑CCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTACCTGAC > CP009974/3406816‑3407110 | tCGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGacat > 2:385034/1‑150 (MQ=255) gACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGCGTACCGCAACCACCCGGTGACTCAGGACA‑tcc > 1:5194482/1‑151 (MQ=255) gACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑tcc > 1:65240/1‑151 (MQ=255) ccTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑tccc < 2:2673302/150‑2 (MQ=255) cTTCCGCTGCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACGACCCGGTGACTCAGGACA‑tcccg < 2:4693401/151‑3 (MQ=255) ttCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGa > 1:2081296/1‑151 (MQ=255) tCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGat > 1:1692965/1‑151 (MQ=255) ccACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGatc < 1:1985658/151‑1 (MQ=255) aCTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGatcat < 1:5556571/151‑1 (MQ=255) ttCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCCTCg > 2:2435593/1‑151 (MQ=255) tgtgCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTcc > 1:4313072/1‑151 (MQ=255) cggcccGCACTAGGGGGTGGCCCAGACCAGGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCg < 2:4561540/148‑1 (MQ=255) cGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCg > 1:4301626/1‑151 (MQ=255) gACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGa > 1:5244632/1‑151 (MQ=255) gACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGa > 1:2901303/1‑151 (MQ=255) aCCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCCAc > 2:815549/1‑151 (MQ=255) gCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAg < 1:46306/151‑1 (MQ=255) gCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAg < 1:3987945/151‑1 (MQ=255) tccAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTGCGGTAATTCTTCAGGACCTGATCATGCCGGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGa < 1:923996/150‑1 (MQ=255) aCCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGa < 1:5826431/151‑1 (MQ=255) ccAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGaa < 1:3308549/151‑1 (MQ=255) ccAGACGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGaa > 2:5387962/1‑151 (MQ=255) aGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGa < 1:2195495/151‑1 (MQ=255) tGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGtt < 1:3911134/151‑1 (MQ=255) ggCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTg > 1:4528278/1‑151 (MQ=255) ccAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTa < 2:2523745/151‑1 (MQ=255) ccAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTa > 1:3071014/1‑151 (MQ=255) cAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTaa < 1:3967660/151‑1 (MQ=255) cAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTaa > 2:2305077/1‑151 (MQ=255) cAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTaa < 2:4899601/151‑1 (MQ=255) cAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTaa > 2:6211016/1‑151 (MQ=255) cAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGCaa > 2:1337851/1‑151 (MQ=255) ggCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAag < 1:2999431/151‑1 (MQ=255) ggCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACACCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAag < 2:4327031/151‑1 (MQ=255) gCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAaga < 1:6211016/151‑1 (MQ=255) gCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAaga > 2:6432592/1‑151 (MQ=255) cATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGt > 2:6001623/1‑151 (MQ=255) gcgcATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCg > 1:1210265/1‑151 (MQ=255) cATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCa > 2:4150980/1‑151 (MQ=255) cATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCa > 2:3099352/1‑151 (MQ=255) aTCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCAt > 1:1560899/1‑151 (MQ=255) tCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCAtt > 1:2469606/1‑151 (MQ=255) tCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCAtt > 1:5029837/1‑151 (MQ=255) aGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTgc > 1:5794388/1‑151 (MQ=255) tACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTgccgcc > 1:739973/1‑151 (MQ=255) cATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGcc < 1:4098444/151‑1 (MQ=255) aaTTCTTCAGGACCTGATCATGCCGGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCCTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGcc < 2:6307671/150‑1 (MQ=255) aTTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCa > 2:3667364/1‑151 (MQ=255) ttgttcAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCaa < 1:6495236/148‑1 (MQ=255) tcttcAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGATATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCCAc > 2:2844424/1‑151 (MQ=255) tcttcAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAAc > 2:3803917/1‑151 (MQ=255) cttcAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACg < 2:3145132/151‑1 (MQ=255) ttcAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGAGCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGa < 2:5794393/151‑1 (MQ=255) tcAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGAt > 1:5880106/1‑151 (MQ=255) cAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGAtt > 2:1090099/1‑151 (MQ=255) cAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGAtt > 1:3734816/1‑151 (MQ=255) cccTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCt < 2:1682273/150‑1 (MQ=255) aCCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCt < 2:3402916/151‑1 (MQ=255) tGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGt > 1:256523/1‑151 (MQ=255) gATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTc > 1:1915776/1‑151 (MQ=255) gATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTc > 1:1831775/1‑151 (MQ=255) aTGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGc < 1:5929885/151‑1 (MQ=255) aTGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGc > 1:5436462/1‑151 (MQ=255) tggcctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCt < 1:1438617/151‑1 (MQ=255) ctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGaca > 1:2732615/1‑151 (MQ=255) ctggACGGCTCGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGACAACGATTACCTGGTCAAGCTGCCTGaca < 1:2290027/151‑1 (MQ=255) tggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGacac > 2:116202/1‑151 (MQ=255) cGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATc < 2:1969804/151‑1 (MQ=255) ggCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCg > 1:2376414/1‑151 (MQ=255) ggCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCg > 1:3782374/1‑151 (MQ=255) ggCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCg < 1:2862639/151‑1 (MQ=255) ttGTCCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAAc < 1:5614978/151‑1 (MQ=255) gACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACtg < 2:3463134/151‑1 (MQ=255) gACCCTGGTGCGTGAGTACCGCAACAACCCGGGGCCTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACtg < 2:5959780/151‑1 (MQ=255) aCCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACtgg > 1:3609121/1‑151 (MQ=255) ccTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACCTCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACtggtg < 2:4992032/151‑1 (MQ=255) cTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACtggtgg < 1:4799551/151‑1 (MQ=255) cgggAGTACCGCAACGACCCGGTGTCTGAGGAGAGCCCTATCTTCGTCCGGTCGAGCAAGGAAGAGCCATTGGTAAGGAGTGCGGCACTTCCCGCCGGGGCCAACGATTCCCTGGTCAAGCTGCCTGACACCATGGTACTGGTGGGACGCa < 2:486033/148‑1 (MQ=255) gTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGCCCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCAt < 1:840600/151‑1 (MQ=255) gTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCAt > 2:5264786/1‑151 (MQ=255) gTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCAt > 1:3412236/1‑151 (MQ=255) tGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATc < 1:4865955/151‑1 (MQ=255) gAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATcc < 2:734498/151‑1 (MQ=255) aCCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTa < 2:2113254/151‑1 (MQ=255) cGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTAcc < 1:3556123/151‑1 (MQ=255) cGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTAcc < 2:5661695/151‑1 (MQ=255) gCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCa > 1:6468479/1‑151 (MQ=255) caacaaCCCGGTGACTCAGGACATCCCTGTCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCAc < 2:4468777/151‑1 (MQ=255) caacaaCCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCAc > 1:4201631/1‑151 (MQ=255) aacaacCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACt < 2:5915245/151‑1 (MQ=255) aacaacCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACt > 1:4966076/1‑151 (MQ=255) caacCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTcg < 2:1749102/151‑1 (MQ=255) acCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTcgcg > 2:396607/1‑151 (MQ=255) cccGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGTCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGACCTGGTGGCACGCATCCGTTACCACTcgccc > 2:4064657/1‑149 (MQ=255) cccGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCgcgc < 2:2903989/151‑1 (MQ=255) cGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTc < 1:1028944/151‑1 (MQ=255) ggTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTcc > 2:5593774/1‑151 (MQ=255) tGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTGGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGCCACGCATCCGTTACCACTcgcgacactc > 2:3593782/1‑145 (MQ=255) tCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTACCTg < 1:6166714/151‑1 (MQ=255) aGGACATCCCGATCATCGTCCTTTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGTGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTACCTGAc > 2:3118179/1‑151 (MQ=255) | ATCGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑CCCGATCATCGTCCTGTCGACCAAGGAAGACCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTACCTGAC > CP009974/3406816‑3407110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |