Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 4,693,000 (C)5→6 coding (1974/5865 nt) RPPX_20910 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099744,692,9951.C99.0% 1027.5 / 2.2 290coding (1969/5865 nt)RPPX_20910hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/2);  new base C (141/144);  total (143/147)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 310 total aligned reads displayed.

TTCCGGCCATCGTGCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACG‑CCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACCGCCCGCCAACCCCGCCGC  >  CP009974/4692846‑4693145
                                                                                                                                                      |                                                                                                                                                       
 tCCGGCCATCGTGCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACG‑cc                                                                                                                                                       >  2:2891551/1‑151 (MQ=255)
  ccGGCCATCGTGCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACG‑ccc                                                                                                                                                      >  2:5265084/1‑151 (MQ=255)
    ggCCATCGGGCCGCTGCCAGGCAAGGCCATGGCGCCGATGGCGGGCGAGGTGGTGGTGGTGCCCAAGTTATCCGATGCACTGGTCGCTGCTCACGGCGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCCTGCCAATGACG‑cccc‑c                                                                                                                                                   <  2:1398015/151‑1 (MQ=255)
     gCCATCGTGCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACG‑cccc‑cc                                                                                                                                                  <  1:3718713/151‑2 (MQ=255)
     gCCATCGTGCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACG‑cccc‑cc                                                                                                                                                  <  2:4565309/151‑2 (MQ=255)
      ccATCGTGCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACG‑cccc‑ccg                                                                                                                                                 >  2:1048218/1‑149 (MQ=255)
        aTCGTGCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACG‑cccc‑ccgtg                                                                                                                                               <  1:3213072/151‑5 (MQ=255)
             gCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCaa                                                                                                                                           <  2:6069339/151‑1 (MQ=255)
              ccGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCGCTGGTCGCTGCTCACGACGATGTCGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAg                                                                                                                                          <  1:1579214/151‑1 (MQ=255)
               cGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAgg                                                                                                                                         <  1:4388769/151‑1 (MQ=255)
                gCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGc                                                                                                                                        >  1:5182302/1‑151 (MQ=255)
                  tGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCg                                                                                                                                      <  1:6307459/151‑1 (MQ=255)
                  tGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCg                                                                                                                                      <  1:921161/151‑1 (MQ=255)
                   gCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGt                                                                                                                                     >  1:3434621/1‑151 (MQ=255)
                    ccAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTc                                                                                                                                    >  2:225442/1‑151 (MQ=255)
                      aGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCgg                                                                                                                                  >  2:959218/1‑151 (MQ=255)
                       ggCAAGGCCATGGCGCCGGTGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGc                                                                                                                                 <  2:4838730/151‑1 (MQ=255)
                        gCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCt                                                                                                                                >  1:1864290/1‑151 (MQ=255)
                          aaGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCa                                                                                                                              <  2:4237790/151‑1 (MQ=255)
                           aGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTAACCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGGCGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCAc                                                                                                                             <  2:5074267/151‑1 (MQ=255)
                             gCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTg                                                                                                                           >  1:5303440/1‑151 (MQ=255)
                             gCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTg                                                                                                                           <  1:1899241/151‑1 (MQ=255)
                             gCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTg                                                                                                                           <  2:1001228/151‑1 (MQ=255)
                                 tGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGgcgc                                                                                                                       >  2:1721621/1‑151 (MQ=255)
                                  ggCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCt                                                                                                                      <  1:3875033/151‑1 (MQ=255)
                                  ggCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCt                                                                                                                      <  2:4138262/151‑1 (MQ=255)
                                    cgcCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTgg                                                                                                                    >  2:598502/1‑151 (MQ=255)
                                     gcCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGt                                                                                                                   <  1:4295009/151‑1 (MQ=255)
                                     gcCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGt                                                                                                                   >  2:4000495/1‑151 (MQ=255)
                                     gcCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGt                                                                                                                   <  1:4499999/151‑1 (MQ=255)
                                      ccGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTc                                                                                                                  <  2:5908307/151‑1 (MQ=255)
                                             cGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCa                                                                                                           <  1:6482703/151‑1 (MQ=255)
                                              gggCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAg                                                                                                          >  2:2949787/1‑151 (MQ=255)
                                               ggCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGc                                                                                                         >  2:4102249/1‑151 (MQ=255)
                                                 cAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGa                                                                                                       >  1:4209236/1‑151 (MQ=255)
                                                   aGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGCCGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACCGGCCCTGGTCGACCGCAGCGATg                                                                                                     >  2:3696540/1‑151 (MQ=255)
                                                    ggtggtggtggtGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGc                                                                                                    <  1:3926706/151‑1 (MQ=255)
                                                     gtggtggtggtgCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGcc                                                                                                   >  2:4790960/1‑151 (MQ=255)
                                                         tggtggtgCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAAcc                                                                                               <  1:340419/151‑1 (MQ=255)
                                                         tggtggtgCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAAcc                                                                                               <  2:74292/151‑1 (MQ=255)
                                                          ggtggtgCCCAAGTGATGCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCg                                                                                              <  2:5211022/151‑1 (MQ=255)
                                                          ggtggtgCCCAAGGTATCCGAAGCACTGGTCGCTGCTCACGACGAGGACGAGGGCGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCg                                                                                              <  2:1596743/151‑1 (MQ=255)
                                                           gtggtgCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAAGGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGc                                                                                             >  2:6255514/1‑151 (MQ=255)
                                                            tggtgCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCa                                                                                            >  1:5422925/1‑151 (MQ=255)
                                                            tggtgCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCa                                                                                            <  1:2769722/151‑1 (MQ=255)
                                                               tgCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACg                                                                                         >  2:5703670/1‑151 (MQ=255)
                                                                  ccAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAGTGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGccc                                                                                      >  2:5104250/1‑150 (MQ=255)
                                                                  ccAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCg                                                                                      <  1:2152998/151‑1 (MQ=255)
                                                                     aGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATg                                                                                   >  1:3830793/1‑151 (MQ=255)
                                                                      gTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTc                                                                                                                  >  1:1005190/1‑119 (MQ=255)
                                                                       ttATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGc                                                                                 >  2:4704624/1‑151 (MQ=255)
                                                                       ttATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGCCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGCTGGc                                                                                 >  2:5326132/1‑151 (MQ=255)
                                                                        tATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCa                                                                                >  2:2994892/1‑151 (MQ=255)
                                                                        tATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCa                                                                                <  1:4400078/151‑1 (MQ=255)
                                                                         aTCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAg                                                                               <  1:5510404/151‑1 (MQ=255)
                                                                             gAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTg                                                                           <  1:2255390/151‑1 (MQ=255)
                                                                             gAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTg                                                                           >  1:5348100/1‑151 (MQ=255)
                                                                             gAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTg                                                                           >  2:6490707/1‑151 (MQ=255)
                                                                                 cACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCCCACTGGCGCTGGTCGACCGCAGCGGTGCCAACCGCAACGCCGATGGCAGCTTGaaaa                                                                       >  2:2085236/1‑151 (MQ=255)
                                                                                   cTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAAc                                                                     <  1:3693014/151‑1 (MQ=255)
                                                                                    tGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAAcc                                                                    >  1:5819392/1‑151 (MQ=255)
                                                                                     ggTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAAccc                                                                   <  2:1168089/151‑1 (MQ=255)
                                                                                     ggTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAAccc                                                                   >  1:5957581/1‑151 (MQ=255)
                                                                                       tCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCg                                                                 <  1:3805954/151‑1 (MQ=255)
                                                                                         gctgctCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGc                                                               >  2:1770146/1‑151 (MQ=255)
                                                                                         gctgctCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTGGAAAAACCCCGGc                                                               >  2:2617269/1‑151 (MQ=255)
                                                                                          ctgctCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCt                                                              >  2:2857655/1‑151 (MQ=255)
                                                                                           tgctCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTa                                                             <  1:1372947/151‑1 (MQ=255)
                                                                                            gctCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTAt                                                            >  1:814825/1‑151 (MQ=255)
                                                                                             ctCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATc                                                           >  1:2546633/1‑151 (MQ=255)
                                                                                              tCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATcc                                                          <  2:3392748/151‑1 (MQ=255)
                                                                                                 cgacgaTGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGtt                                                       <  1:667980/151‑1 (MQ=255)
                                                                                                  gacgaTGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTc                                                      <  1:169791/151‑1 (MQ=255)
                                                                                                   acgaTGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCt                                                     <  2:1863448/151‑1 (MQ=255)
                                                                                                     gaTGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTgg                                                   >  2:1944340/1‑151 (MQ=255)
                                                                                                     gaTGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTgg                                                   <  1:5599944/151‑1 (MQ=255)
                                                                                                       tGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACACCGCTGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGAt                                                 >  2:5009672/1‑151 (MQ=255)
                                                                                                         aCGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCg                                               <  1:6130069/151‑1 (MQ=255)
                                                                                                           gAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGt                                             >  1:5052780/1‑151 (MQ=255)
                                                                                                              gACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGc                                          <  1:2916103/151‑1 (MQ=255)
                                                                                                              gACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGc                                          <  1:4000495/151‑1 (MQ=255)
                                                                                                                cGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCAt                                        <  2:5052851/151‑1 (MQ=255)
                                                                                                                        aCGAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCa                                >  1:4547564/1‑151 (MQ=255)
                                                                                                                          gAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAgt                              >  2:3444342/1‑151 (MQ=255)
                                                                                                                          gAGGGCGATGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAgt                              >  2:5472947/1‑151 (MQ=255)
                                                                                                                               ggATGACGAGCATGCCAATGACGCCCCC‑CGGGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCgg                         <  2:4482173/150‑1 (MQ=255)
                                                                                                                                aaataCGCGCAAGCCACAGACG‑CCCCACGCGCGCAAGGCCCTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAATCGAAACGCCGATAGCAGCTTGAAAATCCCCGGCTATCCGTTATGGATCGGTGGCATGGAAAGCAGTGTCGGt                        <  2:3967483/147‑1 (MQ=255)
                                                                                                                                 aTGACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAAGCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTa                       >  2:4662937/1‑151 (MQ=255)
                                                                                                                                 aTGACGAGCATGCCAATCACGACCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCAATGGCAGCTTGAAAAGCCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTa                       <  2:2458626/151‑1 (MQ=255)
                                                                                                                                   gACGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAAc                     >  2:1321952/1‑151 (MQ=255)
                                                                                                                                    aCGAGCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAAcc                    <  1:1186939/151‑1 (MQ=255)
                                                                                                                                     cgggCATGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAAccg                   <  2:1481916/148‑1 (MQ=255)
                                                                                                                                          aTGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAAccgcccgc              >  2:3143754/1‑151 (MQ=255)
                                                                                                                                           tGCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACcgcccgcc             >  2:2308785/1‑151 (MQ=255)
                                                                                                                                            gCCAATGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACCGCCCGCCa            <  1:3092542/151‑1 (MQ=255)
                                                                                                                                               aaTGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACCGCCCGCCAAcc         >  2:615578/1‑151 (MQ=255)
                                                                                                                                                aTGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACCGCCCGCCAAccc        <  2:6403376/151‑1 (MQ=255)
                                                                                                                                                 tGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACCGCCCGCCAAcccc       >  2:3801735/1‑151 (MQ=255)
                                                                                                                                                 tGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACCGCCCGCCAAcccc       >  2:868471/1‑151 (MQ=255)
                                                                                                                                                 tGACGCCCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACCGCCCGCCAAcccc       <  1:1716918/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                       
TTCCGGCCATCGTGCCGCTGCCAGGCAAGGCCATGGCGCCGATGCCGGGCAAGGTGGTGGTGGTGCCCAAGTTATCCGAAGCACTGGTCGCTGCTCACGACGATGACGAGGACGGCGAAGACGAGGGCGATGACGAGCATGCCAATGACG‑CCCC‑CGTGCGCAAGGCCGTCGGCTCACTGGCGCTGGTCGACCGCAGCGATGCCAACCGCAACGCCGATGGCAGCTTGAAAAACCCCGGCTATCCGTTCTGGATCGGTGGCATGGAAAGCAGTGTCGGTAACCGCCCGCCAACCCCGCCGC  >  CP009974/4692846‑4693145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑