| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | 2596 = | 1 (0.000) | 239 (0.770) | 152/284 | 1.5 | 99.8% | intergenic (‑203/+211) | RPPX_00010/RPPX_00015 | integrase/peptidase S24 |
| ? | CP009974 | = 5798526 | 0 (0.000) | intergenic (‑14/–) | RPPX_25885/– | integrase/– | |||||
Only 100 of 261 total aligned reads displayed.
ATTCCGGCCCGACTTGGCCAAGACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009974/2752‑2596‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagtgtTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTTATCGAGTCAG < CP009974/5798526‑5798377 CGGCCCGACTTGGCCAAGACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGT < 1:2077958/151‑1 GCCCGACTTGGCCAAGACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGT > 1:707177/1‑151 ACTTGGCCAAGACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAG > 1:3092484/1‑151 TTGGCCAAGACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGG > 1:2078062/1‑151 GGCCAAGACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGATGTTTTTTAGTGCc > 2:4781314/1‑150 GCCAAGACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAG < 1:815955/151‑1 ACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCAT < 2:3136206/151‑1 CGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATG > 1:9269/1‑151 CGCAGATAATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATG < 2:577678/151‑1 GCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGA < 2:852153/151‑1 GATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGC > 1:423954/1‑151 TCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTG < 1:2824511/151‑1 CGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTAT > 1:1757979/1‑151 GTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATT > 2:4200536/1‑151 TACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACCGCAGTTTCCAGGCTTCATAAGGCAATCCATCGGCAGTGTTTTAGGGCACCGGCATGAGGCTGGTATTC > 2:4080338/1‑151 ACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCG > 1:5448215/1‑151 CTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCGTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGC > 1:5069229/1‑151 CAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAA > 2:769767/1‑151 CAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAA > 2:1156484/1‑151 ACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAA > 2:3576612/1‑151 AACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGA > 2:3688308/1‑151 GATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCT > 1:6451600/1‑151 GATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCT > 1:4818005/1‑151 ATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTA < 1:4602175/151‑1 TCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAG > 1:1871913/1‑151 TCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAG > 2:5473563/1‑151 GGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTA > 1:1050668/1‑151 GGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTA < 1:5171834/151‑1 GGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAG > 2:2318643/1‑151 GGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGC < 1:2585458/151‑1 GGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGC > 2:466632/1‑151 GGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGT < 1:1474070/151‑1 GAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTC < 2:4102554/151‑1 AATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCG < 2:5150567/151‑1 AATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCG > 2:2548512/1‑151 TTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCT < 2:1745653/151‑1 TAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTT > 1:6468236/1‑151 AGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTT < 1:3026534/151‑1 GTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTG < 1:5561464/151‑1 GTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGACCCTTTG > 2:2440473/1‑151 GTAAATCCTGTAGAGTCCGCGCCACCTTCCGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTG < 1:5480227/151‑1 AATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGCCCTAGCATTAGCAGGGCGATCCTTTGccg > 2:3859653/1‑148 ATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGG < 1:3454243/151‑1 GTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTC < 2:3083722/151‑1 GTAGAGGCCGCGCCACCGTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTC < 2:6356552/151‑1 AGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCG < 1:5592851/151‑1 GAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGT > 2:4287019/1‑151 AGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTT > 2:692143/1‑151 GTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTG < 2:6062413/151‑1 TCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGC > 2:1502719/1‑151 GCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCGTTAGCAGGTCGATCCTTTGAAGG > 2:5120153/1‑137 CACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGG < 2:5610629/151‑1 ACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGG > 2:818776/1‑151 ACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTT > 2:3311165/1‑141 CTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTC > 2:1009535/1‑151 TCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAG > 2:5577359/1‑151 AACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGG < 2:5705671/151‑1 ACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGA > 2:1771769/1‑151 CCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGAT < 1:4053669/151‑1 CCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGG > 2:4532761/1‑139 CCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGG < 1:4532761/139‑1 CTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGC > 2:6460803/1‑151 TCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCC > 2:2888004/1‑151 CTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCA > 2:4479854/1‑151 TGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAG < 2:3803691/151‑1 GGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGT < 2:5238081/151‑1 AACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCG > 2:57437/1‑151 ACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGA < 2:2697065/151‑1 CAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCA < 1:5832261/151‑1 gggtgcgAGGGTTCAGGAGGGAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTCGTATTCGCAACAAAGGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAG < 2:6232519/144‑1 AGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTACGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAG > 2:2102049/1‑151 GTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGC > 1:704686/1‑151 TTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCT < 1:466632/151‑1 TTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCT > 2:3608761/1‑151 TTCCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTC > 1:3168627/1‑151 CCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAA < 2:5955331/151‑1 CCAGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAA > 2:4963712/1‑151 AGGCTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATC < 1:2317490/151‑1 CTTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTT > 1:3962052/1‑151 TTCATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTC > 2:1963009/1‑151 CATAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCT < 1:5940421/151‑1 TAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTT > 1:6228873/1‑151 TAAGGCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTT > 1:2530851/1‑151 GCAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCA < 1:3280193/151‑1 CAATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCAC < 1:2004895/151‑1 AATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGACGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACA < 1:493509/151‑1 ATCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACAC > 2:3019541/1‑151 ATCCATTGGAAGTGTTTTAGGGCAGCGGCACGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACAC > 2:5362313/1‑151 TCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACG > 1:3543775/1‑151 TCCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACG > 1:1493971/1‑151 CCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGC > 1:4511784/1‑151 CCATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGC < 1:603028/151‑1 cTTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTT < 2:1363930/150‑1 ATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTT > 2:1310985/1‑151 ATTGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTT < 1:2224776/151‑1 TGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTTAT > 2:4433825/1‑151 TGGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTTAT > 2:1209092/1‑151 GGAAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTTATC > 1:1296842/1‑151 AAGTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTTATCGA < 1:3801867/151‑1 GTGTTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTTATCGAGT < 1:2279641/151‑1 ATTCCGGCCCGACTTGGCCAAGACGCCGATCATCGTACTGAGCAACAACGATCTGAGGGGTGGGAATCGTTAGTAAATCCTGTAGAGTCCGCGCCACCTTCTGAACCCCTCTGGAACAGCAGTTTCCAGGCTTCATAAGGCAATCCATTGGAAGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009974/2752‑2596‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagtgtTTTAGGGCAGCGGCATGAGGCTGGTATTCGCAACAAAAGACCTAGCATTAGCAGGTCGATCCTTTGAAGGCTTTCCGTTGCTGATTGGGTCAGAGGGATGGCCAGTCGAGCCAGCTCAATCCTTCCTTTGGCACACGCTTATCGAGTCAG < CP009974/5798526‑5798377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |