| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 2747117 | 4 (0.010) | 305 (0.980) | 177/284 | 0.3 | 98.6% | coding (76/867 nt) | RPPX_12205 | LysR family transcriptional regulator |
| ? | CP009974 | 2749721 = | 5 (0.020) | coding (99/216 nt) | RPPX_12220 | hypothetical protein | |||||
Only 100 of 333 total aligned reads displayed.
TGGTGAGAGCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTCA > CP009974/2746967‑2747267 | tGGTGAGAGCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCT > 1:2221308‑M1/1‑151 (MQ=255) ggTGAGAGCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTc > 1:518192‑M1/1‑150 (MQ=255) gTGAGAGCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTca > 2:2190164‑M1/1‑149 (MQ=255) gagaGCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacg > 2:68107‑M1/1‑147 (MQ=255) gagaGCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacg < 1:4134120‑M1/151‑5 (MQ=255) gagaGCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacg > 1:3180833‑M1/1‑147 (MQ=255) agCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggac < 2:6217330‑M1/151‑8 (MQ=255) cACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggc > 2:3205199‑M1/1‑141 (MQ=255) cACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggc > 1:3285934‑M1/1‑141 (MQ=255) aCCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggct < 2:1494112‑M1/151‑12 (MQ=255) gcgcgcTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtg > 2:3442216‑M1/1‑137 (MQ=255) cgcgcTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgt > 2:4864029‑M1/1‑136 (MQ=255) cgcTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaa < 1:3699353‑M1/151‑18 (MQ=255) ctATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtcacgtg > 2:3831428‑M1/1‑130 (MQ=255) ctATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtg > 1:2405420‑M1/1‑130 (MQ=255) ctATAACACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtg < 2:391443‑M1/151‑22 (MQ=255) atCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggaga > 1:5516495‑M1/1‑126 (MQ=255) tCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagac < 2:4423448‑M1/151‑27 (MQ=255) cTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgct > 2:2223285‑M1/1‑122 (MQ=255) cTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgct < 1:5931461‑M1/151‑30 (MQ=255) tAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctc < 1:275501‑M1/151‑31 (MQ=255) tAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctc > 1:4413374‑M1/1‑121 (MQ=255) cgacgaACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgcc > 1:5396954‑M1/1‑117 (MQ=255) gaACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccc > 2:2710528‑M1/1‑113 (MQ=255) aaCGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgcccc < 2:794515‑M1/151‑40 (MQ=255) gAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgcta > 2:1620704‑M1/1‑108 (MQ=255) aaGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaa < 1:6227815‑M1/151‑45 (MQ=255) aaGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaa > 1:5419967‑M1/1‑107 (MQ=255) aGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaac < 1:3516562‑M1/151‑46 (MQ=255) aTCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgct < 1:3663317‑M1/151‑49 (MQ=255) aTCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgcc > 2:3319327‑M1/1‑103 (MQ=255) tCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctg < 2:546879‑M1/151‑50 (MQ=255) gTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccg > 1:5220803‑M1/1‑99 (MQ=255) tAGCGCTGTGAAGCTAGAACGGTAGGCTGCACTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccgg < 2:1714973‑M1/151‑54 (MQ=255) tAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccgg > 1:2926349‑M1/1‑98 (MQ=255) agagCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggt > 1:6106218‑M1/1‑97 (MQ=255) gagCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtt < 1:4327989‑M1/151‑56 (MQ=255) gCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttc < 1:3318519‑M1/151‑58 (MQ=255) cTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcg < 1:421396‑M1/151‑59 (MQ=255) gAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaaga > 1:256100‑M1/1‑89 (MQ=255) aaGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagat < 2:3009509‑M1/151‑64 (MQ=255) aGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatg < 2:387630‑M1/151‑65 (MQ=255) gCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatgg < 2:6369506‑M1/151‑66 (MQ=255) gCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatgg > 1:3028577‑M1/1‑86 (MQ=255) cTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggt < 1:853510‑M1/151‑67 (MQ=255) aCGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacga > 2:2498624‑M1/1‑80 (MQ=255) aCGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacga < 1:4567080‑M1/151‑72 (MQ=255) cGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaa > 1:5667332‑M1/1‑79 (MQ=255) ggTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaag > 1:3058641‑M1/1‑78 (MQ=255) ggCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgc < 1:1026850‑M1/151‑78 (MQ=255) ncgTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggt > 1:6545996‑M1/2‑65 (MQ=255) tCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttga > 1:1335836‑M1/1‑62 (MQ=255) gcgAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatc > 1:3498395‑M1/1‑58 (MQ=255) cgAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatgggcacgaagacgcggacaaggttgagatcg > 1:2289827‑M1/1‑57 (MQ=255) gAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcga < 2:6027275‑M1/151‑96 (MQ=255) gAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcga < 2:2318498‑M1/151‑96 (MQ=255) aGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgat > 2:2879922‑M1/1‑55 (MQ=255) cTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcatt < 1:4869740‑M1/151‑101 (MQ=255) cTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcatt > 2:2087290‑M1/1‑51 (MQ=255) tGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattat > 1:3819579‑M1/1‑49 (MQ=255) tGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattat < 1:688120‑M1/151‑103 (MQ=255) gAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattata > 2:4176719‑M1/1‑48 (MQ=255) aCAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaa < 2:459260‑M1/151‑106 (MQ=255) aCAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaa > 2:3595234‑M1/1‑46 (MQ=255) cAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaat < 2:304642‑M1/151‑107 (MQ=255) ggcGGATCACCCCATGGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaata < 2:5657697‑M1/150‑108 (MQ=255) gATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatc < 2:5517625‑M1/151‑112 (MQ=255) aTCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcc < 2:1697469‑M1/151‑113 (MQ=255) tCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcct < 1:3994975‑M1/151‑114 (MQ=255) aCCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgc < 2:1896328‑M1/151‑116 (MQ=255) ccATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgctta > 1:5298695‑M1/1‑33 (MQ=255) ccATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgctta < 1:2083501‑M1/151‑119 (MQ=255) cATTGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttat > 2:587136‑M1/1‑32 (MQ=255) ttGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattt < 1:5869172‑M1/151‑122 (MQ=255) tGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttatttt < 2:4948692‑M1/151‑123 (MQ=255) tGGTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttatttt < 1:3416696‑M1/151‑123 (MQ=255) gTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgatgacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaa > 2:5752684‑M1/1‑27 (MQ=255) gTCGCGGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaa < 2:6464510‑M1/151‑125 (MQ=255) gcgGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaatt > 2:5312215‑M1/1‑24 (MQ=255) cgGAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattt > 2:6278434‑M1/1‑23 (MQ=255) ggAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattca > 1:184687‑M1/1‑22 (MQ=255) ggAGCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattca < 1:6409381‑M1/151‑130 (MQ=255) aacgtcaccAAGTCATA‑CTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGgcaggcag > 2:1068964/8‑151 (MQ=1) gCCTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaa < 1:915315‑M1/151‑133 (MQ=255) ccTGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaa > 1:697696‑M1/1‑18 (MQ=255) tcaccAAGTCATA‑CTGCGGATTCCACTCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGTCAGGCAGCCAc > 1:1943039/4‑151 (MQ=11) tGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaata > 2:2354282‑M1/1‑16 (MQ=255) tGGCCAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaata > 1:1702863‑M1/1‑16 (MQ=255) ccAAGTCATA‑CTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCa < 2:3410615/151‑1 (MQ=2) ccAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatat > 2:1398430‑M1/1‑13 (MQ=255) cAAGGCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttatttaaaaaaaaaaaatatatc < 2:1246655‑M1/151‑140 (MQ=255) ggCATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctat < 1:1402586‑M1/151‑143 (MQ=255) cATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctattt < 2:5220803‑M1/151‑145 (MQ=255) cATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctattt < 1:4988344‑M1/151‑145 (MQ=255) cATAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgatgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctattt > 2:6121316‑M1/1‑7 (MQ=255) aTAGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctatttg < 1:4785867‑M1/151‑146 (MQ=255) aGCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctatttgat < 2:5054582‑M1/151‑148 (MQ=255) gCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctatttgatc < 2:406120‑M1/151‑149 (MQ=255) gCTcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctatttgatc < 2:1840245‑M1/151‑149 (MQ=255) tcacggacggctgtgtaacgtggagacgctccgccgccccgctaacgctgccggtttcgaagatggtcacgaagacgcggacaaggttgagatcgatcattataaatagatcctgcttattttaaattcaaaaatatatctatttgatcta > 1:1516292‑M1/1‑1 (MQ=255) | TGGTGAGAGCCACCGCGCGCTCTATATCACTAAGCGACGAACGGAAGGATCCGTAGAGCTGTGAAGCTAGAACGGTAGGCTGCATTCCGTCGCGCGAGCGCTTGAACAGCGGATCACCCCATTGGTCGCGGAGCCTGGCCAAGGCATAGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTCA > CP009974/2746967‑2747267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |