| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 3,486,773 | Δ2,604 bp | RPPX_15555–RPPX_15560 | RPPX_15555, RPPX_15560 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 3486773–3489370 | 3489376 | 7–2604 | 291 [1] | [0] 289 | RPPX_15555–RPPX_15560 | RPPX_15555,RPPX_15560 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 3486772 | 1 (0.000) | 268 (0.860) | 171/284 | 0.5 | 99.8% | intergenic (+358/‑204) | RPPX_15550/RPPX_15555 | RNA polymerase sigma factor/integrase |
| ? | CP009974 | 3489377 = | 0 (0.000) | intergenic (+114/+176) | RPPX_15560/RPPX_15565 | ATPase AAA/ferredoxin | |||||
Only 100 of 291 total aligned reads displayed.
ATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGATGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC > CP009974/3486622‑3486922 | cAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAca < 1:5091399‑M1/151‑3 (MQ=255) cAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAca < 2:585096‑M1/151‑3 (MQ=255) gTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgca < 2:1835157‑M1/151‑7 (MQ=255) gTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgca < 1:3843087‑M1/151‑7 (MQ=255) tCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTGTTCGACCTGTGCACAGGGAcatgcac > 1:6536362‑M1/1‑144 (MQ=255) gTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacag > 1:1198882‑M1/1‑142 (MQ=255) gTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacag > 2:4872284‑M1/1‑142 (MQ=255) gTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacag > 1:6000621‑M1/1‑142 (MQ=255) gTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacag > 2:2829924‑M1/1‑142 (MQ=255) aaaGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttc > 1:5490633‑M1/1‑136 (MQ=255) aaGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttca < 1:32296‑M1/151‑17 (MQ=255) ggCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcagg < 1:5274194‑M1/151‑19 (MQ=255) ggCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcagg < 2:5946024‑M1/151‑19 (MQ=255) gCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatga < 1:5640232‑M1/151‑23 (MQ=255) cATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaa < 2:3376744‑M1/151‑24 (MQ=255) aTTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaag > 2:2692887‑M1/1‑127 (MQ=255) tttttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaagg < 1:203746‑M1/151‑26 (MQ=255) tttttACAACCCATGGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaagg < 2:1045320‑M1/151‑26 (MQ=255) ttttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggc < 1:5840349‑M1/151‑27 (MQ=255) ttttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggc > 1:1553903‑M1/1‑125 (MQ=255) ttACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggcca > 1:768025‑M1/1‑123 (MQ=255) tACAACCCATTAGAGAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaa < 1:5020339‑M1/151‑30 (MQ=255) cAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaagg < 1:430725‑M1/151‑32 (MQ=255) aCCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggac > 2:267323‑M1/1‑118 (MQ=255) ccATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgt < 1:3512951‑M1/151‑36 (MQ=255) aaaaGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaag > 2:1454626‑M1/1‑110 (MQ=255) cATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcg > 1:553080‑M1/1‑105 (MQ=255) aTGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcga > 1:6121848‑M1/1‑104 (MQ=255) aTGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcga > 1:1097223‑M1/1‑104 (MQ=255) tGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgat > 2:2400407‑M1/1‑103 (MQ=255) tttATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttc < 1:80021‑M1/151‑52 (MQ=255) tATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcat < 2:4490401‑M1/151‑54 (MQ=255) aTTCACCAGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatc < 2:4022913‑M1/151‑55 (MQ=255) tCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcag > 2:856272‑M1/1‑95 (MQ=255) tCACCGGTGAATAAATGTGTCCGAGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgacggccaaggacgtcgcaagaagcgatttcatcag < 1:2401469‑M1/151‑57 (MQ=255) cACCGGTGAATAAATGTGTCCGCGGAAATACCTGGCAAGGTCCATCGCTTGCTCGCCGGGCGGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcagg < 2:5446297‑M1/151‑58 (MQ=255) cGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatg > 2:5691797‑M1/1‑91 (MQ=255) ggTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatga < 2:772401‑M1/151‑62 (MQ=255) ggTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatga > 2:259349‑M1/1‑90 (MQ=255) gTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgat > 2:3122787‑M1/1‑89 (MQ=255) aaTGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttggg < 2:1516297‑M1/151‑70 (MQ=255) gtgtCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggaca < 2:5138761‑M1/151‑73 (MQ=255) tCCGCTGATTTACTTTGCTTGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccatggacgtcgcaagaagcgatttcatcaggatgatgttcgggacaagc > 2:2178799‑M1/1‑76 (MQ=255) tCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcagg < 1:4544949‑M1/133‑58 (MQ=255) ccGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagca < 1:1384635‑M1/151‑77 (MQ=255) cgcgGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcag > 1:1843941‑M1/1‑74 (MQ=255) cgGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcaggg < 1:518540‑M1/151‑80 (MQ=255) ggAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGACCTGTGCACAGGGAcatgcacaggctttcaggacgaaggccaaggacgtcgcaagaagcgatttcatcaggacgatgtttgggacaagcagggc > 2:3471387‑M1/1‑71 (MQ=255) ggAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcaggga > 1:858081‑M1/1‑71 (MQ=255) ggAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcaggga < 1:4062052‑M1/151‑81 (MQ=255) ggAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcaggga < 1:4434427‑M1/151‑81 (MQ=255) gAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTAGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggac > 2:6131505‑M1/1‑70 (MQ=255) aaaTACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggact < 2:3232482‑M1/151‑83 (MQ=255) cagcctggCAAGGTGCATCGCTTGCTCGCCGGGCTGACCCCGATAGTATTCGAACTGTGCACAGGGAcctgcagagggttccaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactac < 2:4551234‑M1/148‑85 (MQ=255) tACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcctcaggatgatgtttgggagaagcagggactacg > 2:4273253‑M1/1‑66 (MQ=255) aCCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacgg < 1:937903‑M1/151‑87 (MQ=255) ccTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacgga < 1:3080190‑M1/151‑88 (MQ=255) cTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGCACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaa < 2:1574860‑M1/151‑89 (MQ=255) ttGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaa > 2:1268678‑M1/1‑62 (MQ=255) gCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaa > 2:2067109‑M1/1‑60 (MQ=255) aaGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaa > 2:1177605‑M1/1‑58 (MQ=255) gCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcggg < 2:5461474‑M1/151‑104 (MQ=255) cTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggt < 1:4577117‑M1/151‑105 (MQ=255) ttGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtc > 1:2133969‑M1/1‑46 (MQ=255) gCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaa > 1:2491464‑M1/1‑44 (MQ=255) tCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaac > 2:1763279‑M1/1‑42 (MQ=255) ccGGTCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgc < 2:6091626‑M1/151‑113 (MQ=255) ccGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgc < 1:2669355‑M1/151‑113 (MQ=255) cGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagcagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcc > 1:2933535‑M1/1‑38 (MQ=255) cGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcc > 1:6402610‑M1/1‑38 (MQ=255) gggCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagg < 2:3366648‑M1/115‑79 (MQ=255) ggCTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtggg > 2:5208564‑M1/1‑36 (MQ=255) cTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctt > 1:1763335‑M1/1‑34 (MQ=255) cTGAACCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctt < 2:1808011‑M1/151‑118 (MQ=255) aCCCGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttc < 1:3684794‑M1/151‑122 (MQ=255) cccGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcagcatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccccttttttt < 2:4670709‑M1/151‑123 (MQ=255) cGCTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgc > 1:3645744‑M1/1‑27 (MQ=255) cTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgccc > 1:3874‑M1/1‑25 (MQ=255) cTAGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgccc < 1:1925960‑M1/151‑127 (MQ=255) agtagtCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgccccttttgttgcccgt > 1:4240419‑M1/1‑23 (MQ=255) aGTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgt < 2:3788450‑M1/151‑129 (MQ=255) gTATTCGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatatttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgta < 1:2616657‑M1/151‑130 (MQ=255) tATGCGAACTGTGAACAGGGAcaggcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtag < 1:1707806‑M1/151‑131 (MQ=255) tCGAACTGTGCACAGGGAcatggacaggcttgcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaactgtgggcgggtcaaaccgcccctttttttgcccgtaggaa < 2:6005801‑M1/151‑134 (MQ=255) cGAACTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaa > 2:1084398‑M1/1‑17 (MQ=255) aaCTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaac > 1:6281362‑M1/1‑15 (MQ=255) aaCTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaac > 2:3684247‑M1/1‑15 (MQ=255) aaCTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaac < 1:3272911‑M1/151‑137 (MQ=255) cTGTGCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaa > 2:6509363‑M1/1‑13 (MQ=255) tgtgCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaa > 2:481577‑M1/1‑12 (MQ=255) tgtgCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaa > 1:2312612‑M1/1‑12 (MQ=255) gtgCACAGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaa < 2:2289930‑M1/151‑141 (MQ=255) acaGGGAcatgcacaggctttcaggatgaaggacaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaagg > 2:4146741‑M1/1‑7 (MQ=255) caGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggc > 2:644533‑M1/1‑6 (MQ=255) aGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcc > 1:278138‑M1/1‑5 (MQ=255) aGGGAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcc > 1:4839908‑M1/1‑5 (MQ=255) ggAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggcccc > 1:5921629‑M1/1‑3 (MQ=255) gAcatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggccccg > 2:5296037‑M1/1‑2 (MQ=255) gATGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCCGCCACGCAGGATTTAtt > 2:3278460/1‑151 (MQ=14) acatgcacaggctttcaggatgaaggccaaggacgtcgcaagaagcgatttcatcaggatgatgtttgggacaagcagggactacggaaaaaaatgtgggcgggtcaaaccgcccctttttttgcccgtaggaaaacaaaaaaggccccga < 1:1297775‑M1/151‑151 (MQ=255) | ATCAAAGTCGTTTCCAAAGGCTGCATTTTTACAACCCATTGAAAAGCATGGTTTATTCACCGGTGAATAAATGTGTCCGCGGAAATACCTTGCAAGGTCCATCGCTTGCTCGCCGGGCTGAACCCGCTAGTATTCGAACTGTGCACAGGGATGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC > CP009974/3486622‑3486922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |