| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 3756397 | 273 (0.830) | 237 (1.210) +CCAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGAC |
122/180 | 0.1 | 62.5% | intergenic (+279/+361) | RPPX_16775/RPPX_16780 | hypothetical protein/phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| ? | CP009974 | 4031306 = | 204 (0.620) | intergenic (+448/‑336) | RPPX_17905/RPPX_17915 | 23S rRNA methyltransferase/sulfurtransferase | |||||
Only 100 of 701 total aligned reads displayed.
GGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGACTCACCTTTCCGCCCTTACGGC‑GGGTCCCTTTTTGTCGTGGCAAAAAGGG‑ACCAAAAACCGTCGGCTCCCATCATCCGG > CP009974/3756247‑3756544 | agcgtagcgtAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCcc < 1:2397612‑M1/151‑3 (MQ=255) agcggagcgtAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTc > 2:2178577/1‑151 (MQ=255) cgtagcgtagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaa < 2:3331459‑M1/151‑5 (MQ=255) cggagcgtaggggCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaa < 2:5847217‑M1/148‑5 (MQ=255) cggagcgtagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCaa < 1:659417/148‑1 (MQ=255) gagcgtagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCaaaa < 2:3667733/150‑1 (MQ=255) ggcgtaggGGCCGGATGAGGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagc < 2:2805589‑M1/150‑8 (MQ=255) agcgtagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagc < 2:1678320‑M1/151‑8 (MQ=255) gtagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagcttt > 1:907711‑M1/1‑141 (MQ=255) tagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTGACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagcttta < 2:4906397‑M1/151‑12 (MQ=255) ccGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccg > 1:5457409‑M1/1‑134 (MQ=255) ggATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggt < 1:5978813‑M1/151‑20 (MQ=255) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctg < 1:4413398‑M1/151‑24 (MQ=255) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctg < 1:3933955‑M1/151‑24 (MQ=255) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctg < 2:4111654‑M1/151‑24 (MQ=255) aGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcggg > 1:6391246‑M1/1‑122 (MQ=255) gCCGACGGTTTTGGTTACTTTGGCCACGACGAAGGGAACCGGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggc < 2:3524959‑M1/151‑31 (MQ=255) gCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTc > 1:223814/1‑151 (MQ=255) ccGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCt < 1:4021470/151‑1 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgta < 2:4698623‑M1/151‑34 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgta > 1:1045339‑M1/1‑118 (MQ=255) gACGGTTTGGGTTGCTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgta < 2:3064644‑M1/151‑34 (MQ=255) aCGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGAt > 1:1555866/1‑151 (MQ=255) cGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATc > 1:504679/1‑151 (MQ=255) cGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATc > 1:4677076/1‑151 (MQ=255) cGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtaca > 1:5238397‑M1/1‑116 (MQ=255) ggTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCg > 1:1173077/1‑151 (MQ=255) ttGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccg > 1:4987389‑M1/1‑111 (MQ=255) ggggtggcttgggccACGGCGAAAGTGCCCCGCCGGAAGGGCGGAAAGGGGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccg < 2:1561864‑M1/144‑41 (MQ=255) aCTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGACTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGCCGTCCAGt > 2:5221509/1‑151 (MQ=255) cTTTGGCCACGCCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcga < 1:2707455‑M1/151‑48 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgat < 2:1892622‑M1/151‑49 (MQ=255) tgcccacgACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatgg < 2:2954173‑M1/148‑51 (MQ=255) gCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcg > 1:1819780‑M1/1‑99 (MQ=255) gCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcg > 1:5140588‑M1/1‑99 (MQ=255) gCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcg < 1:6197826‑M1/151‑53 (MQ=255) ccACGGCCAACGGAACCCGCCGGAAGGGCGGAAAGGTGACTAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcga < 1:6108572‑M1/151‑54 (MQ=255) ccACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGTGCGTACAATCCGCTTg > 2:6390072/1‑151 (MQ=255) ccACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcga > 1:358280‑M1/1‑98 (MQ=255) aCGACCAAAGTAACCCGTCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacg > 2:6167982‑M1/1‑96 (MQ=255) gACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgcc < 2:907711‑M1/151‑58 (MQ=255) aCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATg < 1:4064114/151‑1 (MQ=255) aCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATg < 1:3041589/151‑1 (MQ=255) aCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccg > 1:5689378‑M1/1‑93 (MQ=255) ccAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccga < 1:214449‑M1/151‑60 (MQ=255) cAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgac < 1:1423133‑M1/151‑61 (MQ=255) cAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgac > 2:474865‑M1/1‑91 (MQ=255) aaGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgcttgcgatggcgacgccgactc > 2:3983631‑M1/1‑89 (MQ=255) gataaCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactca < 2:4509780‑M1/149‑64 (MQ=255) tAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGc > 1:4239555/1‑151 (MQ=255) cccGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcaccttt < 2:1092581‑M1/151‑69 (MQ=255) cggggggaagggCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttc < 2:2364844‑M1/146‑70 (MQ=255) cgccgGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttcc < 2:5706527‑M1/151‑71 (MQ=255) cgccgGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttcc > 1:3412680‑M1/1‑81 (MQ=255) ggAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgccc > 2:697341‑M1/1‑77 (MQ=255) gAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgccct < 2:5314432‑M1/151‑76 (MQ=255) aGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCttt < 2:1782444/151‑1 (MQ=255) gggCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttac > 1:2939463‑M1/1‑73 (MQ=255) gCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGCTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCg > 1:2569407/1‑151 (MQ=255) cGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggc > 2:500102‑M1/1‑70 (MQ=255) ggAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcg < 2:3932722‑M1/151‑83 (MQ=255) gAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGccc > 1:458497/1‑151 (MQ=255) gAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgg > 1:1993030‑M1/1‑68 (MQ=255) tGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccct < 1:822934‑M1/151‑90 (MQ=255) tGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtcccc > 1:287125‑M1/1‑62 (MQ=255) aTAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTAcggc‑gg > 1:1295387/1‑151 (MQ=255) ggCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑ggggg > 2:2543146/1‑149 (MQ=255) ggCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGTc < 2:2720790/151‑1 (MQ=255) gcgcCGGCAGCGTAAATGAGTGTCTACTTGAGGTGAAATCGCACAACCGAACTGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtc < 2:5530479‑M1/151‑97 (MQ=255) cgcCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcg > 1:1933413‑M1/1‑54 (MQ=255) tGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccccttttttcggggc > 2:316223‑M1/1‑50 (MQ=255) tGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcggggccccttttgttgtggc > 1:3311026‑M1/1‑50 (MQ=255) gCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGCTcccccttt > 2:6011047/1‑146 (MQ=255) cATCGTGAATGAATGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcgtggcaa < 2:3790024‑M1/151‑104 (MQ=255) aTCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGTCCCTTTTTGt < 1:4841900/151‑1 (MQ=255) gTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGTCCCTTTTTGTCGt < 1:555638/151‑1 (MQ=255) tgaatgcaTGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcgtggcaaaaagg < 1:5855771‑M1/151‑109 (MQ=255) tgaaggaaTGTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcgtggcaaaaagg < 1:6319686‑M1/151‑109 (MQ=255) atgaatgTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGTCCCTTTTTGTCGTGGCa < 1:4486702/151‑1 (MQ=255) atgaatgTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgcctcacctttccgcccttacggcggggcccattttgtcgtgggcaaaaggggg > 1:530645‑M1/1‑40 (MQ=255) aatgTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcgtggcaaaaagggaccaa < 2:77715‑M1/151‑115 (MQ=255) atgTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGTCCCTTTTTGTCGTGGCaaaaa < 1:365939/151‑1 (MQ=255) tgTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctctttgtcgtggcaaaaagggaccaaaa < 1:3105787‑M1/151‑117 (MQ=255) gTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGTCCCCTTTTGTCTTGGGTAAAAgg > 2:4589856/1‑151 (MQ=255) gTCTACTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcggggccccttttgggttggctaaaagggggcaaaaa > 2:1014954‑M1/1‑34 (MQ=255) tACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGTCCCTTTTTGTCGTGGCAAAAAGGG‑Ac < 2:4411126/151‑1 (MQ=255) cTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcgtggcaaaaagggaccaaaaaccgtc < 2:5457409‑M1/151‑123 (MQ=255) cTTGATGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcggggccccttttgttgtggcgaaaaaggacccaaaacccgc > 2:1179924‑M1/1‑29 (MQ=255) tGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGGCCCCTTTTGTCGTGGCAAAAAGGG‑GCCaaa > 2:4314532/1‑151 (MQ=255) gATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGCGGGGCCCCTTTTTTTTTTGGTAAAAAGGG‑‑CCaaaa > 2:2629383/1‑151 (MQ=255) aTGTGAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttccgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcgtggcaaaaagggaccaaaaaccgtcggct < 2:6319970‑M1/151‑127 (MQ=255) gtgAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGGCCCCTTTTGTCGTGGCAAAAAGGG‑ACCCAAAAcc > 1:4304421/1‑151 (MQ=255) gtgAAAGCGCACAACCCAAAAGCccagagctttagcgccggttctgatcgggcgtacagtccgtttacgatggcgacgccgactcaccttcccgcacttacggcgggtccctttttgtcgtggcaaaaaaaaaaaaaaaaccgtcggctcc < 2:1333025‑M1/151‑129 (MQ=255) tgAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcgtggcaaaaagggaccaaaaaacgtcgggtgcc > 1:1701241‑M1/1‑22 (MQ=255) tgAAAGCGCACAACCCAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcggggccctttttttcgtggcaaaaagggaccaaaaaccgtcggctccc > 1:3823794‑M1/1‑22 (MQ=255) aGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGGCCCTTTTTGTCTTGGCCAAAAGAG‑AGCCAAAACcggcgg > 2:649627/1‑151 (MQ=38) gcATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGGCCCTTTTTGTCGTGGCAAAAAGGGAACCAAAAAcccccgctc > 2:4245688/1‑144 (MQ=37) cacaacccAAAAGCccaaagctttagcgccggttctgatcgggcgtacagtccgtttgcgatggcgacgccgactcacctttccgcccttacggcgggtccctttttgtcgtcgcaaaaagggaccaaaaaccgtcggctcccatcatccg < 1:4123355‑M1/148‑138 (MQ=255) cATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGGCCCTTTTTTTCGTGGGCAAAAGGG‑ACCAAAAACCGACGGCTcc > 2:1990685/1‑151 (MQ=38) aaaaGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGATTCACCTTTCCGCCCTTACGGC‑GGGGCCCTTTTTGTCGTGGTACAAAAGG‑ACCCAAAAACCCCGGCGccccccaccc > 2:1412569/1‑144 (MQ=25) | GGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTGATGTGAAAGCGCATAACCCAAAAGCTCAAAAACTCAAAAGCTTTAGCGCCGGTTCTGATCGGGCGTACAGTCCGTTTGCGATGGCGACGCCGACTCACCTTTCCGCCCTTACGGC‑GGGTCCCTTTTTGTCGTGGCAAAAAGGG‑ACCAAAAACCGTCGGCTCCCATCATCCGG > CP009974/3756247‑3756544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |