| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 4,425,765 | Δ2,602 bp | RPPX_19815–RPPX_19820 | RPPX_19815, RPPX_19820 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 4425765–4428362 | 4428366 | 5–2602 | 312 [2] | [0] 310 | RPPX_19815–RPPX_19820 | RPPX_19815,RPPX_19820 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 4425764 | 2 (0.010) | 295 (0.930) | 180/288 | 0.3 | 99.7% | intergenic (+687/‑204) | RPPX_19805/RPPX_19815 | hypothetical protein/integrase |
| ? | CP009974 | 4428367 = | 0 (0.000) | intergenic (+112/+608) | RPPX_19820/RPPX_19830 | ATPase AAA/ligand‑gated channel protein | |||||
Only 100 of 312 total aligned reads displayed.
AAGGTGTTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC > CP009974/4425614‑4425914 | aGGTGTTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGc < 1:5667894‑M1/151‑2 (MQ=255) gtgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgt < 1:2561181‑M1/151‑4 (MQ=255) gtgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgt > 2:4668630‑M1/1‑148 (MQ=255) gtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttg < 2:1683698‑M1/151‑6 (MQ=255) ttCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttgg < 1:3807091‑M1/151‑7 (MQ=255) tCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggt > 2:3752624‑M1/1‑144 (MQ=255) cAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtg > 1:1992597‑M1/1‑143 (MQ=255) cAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtg > 2:443721‑M1/1‑143 (MQ=255) aGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtga > 2:5378156‑M1/1‑142 (MQ=255) aGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtga < 2:1304490‑M1/151‑10 (MQ=255) aGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtga < 2:4228593‑M1/151‑10 (MQ=255) aGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGAGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtga > 2:5037873‑M1/1‑142 (MQ=255) ggTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgc < 1:999108‑M1/151‑15 (MQ=255) ggccattggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTGATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatc > 1:5707772‑M1/1‑131 (MQ=255) ttggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatca > 1:168855‑M1/1‑126 (MQ=255) ttggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatca < 1:5196554‑M1/151‑26 (MQ=255) ggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagt < 2:4822567‑M1/151‑28 (MQ=255) cattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgc > 1:117451‑M1/1‑121 (MQ=255) cattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgc < 1:3750185‑M1/151‑31 (MQ=255) attCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcg < 1:5557403‑M1/151‑32 (MQ=255) gggggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttc > 1:1860583‑M1/1‑116 (MQ=255) ggggAAGCCACTTGGGAGCGGCTGGGGCACGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTTCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgaactgcgatatcaatcagtcgcgcttcg > 2:229787‑M1/1‑115 (MQ=255) gggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgc < 1:5473783‑M1/151‑38 (MQ=255) gggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgc > 1:2127476‑M1/1‑114 (MQ=255) gggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgc > 2:3065241‑M1/1‑114 (MQ=255) ggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcg < 1:4460733‑M1/151‑39 (MQ=255) aGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcc < 2:2550195‑M1/151‑42 (MQ=255) gCCATTTGGGGGCGGCGGGGGCATGGGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcca < 2:2109410‑M1/151‑43 (MQ=255) ccATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccc > 1:3150430‑M1/1‑108 (MQ=255) tttGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccac < 1:1026566‑M1/151‑47 (MQ=255) gAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgt < 1:6463667‑M1/151‑52 (MQ=255) gAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgt > 1:3246814‑M1/1‑100 (MQ=255) aGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtc > 1:3380911‑M1/1‑99 (MQ=255) gggcTGGGGGATGAGGCTTGGGGGCAGCCGTGCAAGTCGTTGGTGGAGCTGGAGTTCGCGCGCGGGCGGGCGCGTAAGCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcga < 2:4575093‑M1/150‑55 (MQ=255) cGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcga > 1:6268318‑M1/1‑97 (MQ=255) gCTGGGGCAGGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatg < 2:5476657‑M1/151‑57 (MQ=255) cTGGGGCATGAGCCTTCGGGGCAGCCGTTCAGCTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgttctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgc < 2:6365478‑M1/151‑58 (MQ=255) tGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGCGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcg > 1:6132507‑M1/1‑93 (MQ=255) ggCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcga > 2:2332772‑M1/1‑90 (MQ=255) cATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgatt < 2:2481703‑M1/151‑64 (MQ=255) gAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttg < 2:646772‑M1/151‑67 (MQ=255) cTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccg < 1:3103489‑M1/151‑71 (MQ=255) cGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcg < 2:153565‑M1/151‑74 (MQ=255) gCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctt < 1:5852296‑M1/151‑78 (MQ=255) cAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggcttt < 2:3359662‑M1/151‑79 (MQ=255) aGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttc < 2:5763477‑M1/151‑80 (MQ=255) aGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttc < 2:2696636‑M1/151‑80 (MQ=255) aaCTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacc > 2:2599860‑M1/1‑64 (MQ=255) aaCTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggccgctttcaggcaacc > 2:5650873‑M1/1‑64 (MQ=255) cTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccc > 1:1320411‑M1/1‑62 (MQ=255) tCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaaccccc > 2:473501‑M1/1‑61 (MQ=255) tCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaaccccc < 1:1497943‑M1/151‑91 (MQ=255) cGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaaccccca > 1:5960578‑M1/1‑60 (MQ=255) cGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaaccccca < 1:3598618‑M1/151‑92 (MQ=255) ttGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccaca < 2:784891‑M1/151‑94 (MQ=255) gTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatct < 1:242727‑M1/151‑97 (MQ=255) gTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatct < 1:4027629‑M1/151‑97 (MQ=255) gTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatct > 1:1674971‑M1/1‑55 (MQ=255) gTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatct < 1:1788471‑M1/151‑97 (MQ=255) tGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctc < 1:91707‑M1/151‑98 (MQ=255) tGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctc > 1:4322909‑M1/1‑54 (MQ=255) tGCAGCTGGAGTCCGAGCGCGGGCGGCGGCGTAATCCATTCATCAAGGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctc < 1:3924139‑M1/151‑98 (MQ=255) gCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcg < 1:6154722‑M1/151‑99 (MQ=255) cAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggcttgcaggcaacccccacatctcga < 2:5821731‑M1/151‑100 (MQ=255) tGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacctctcgatcaa > 2:3695222‑M1/1‑48 (MQ=255) ggAGTTCGAGCGCGGGCTGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgttctgtgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaat < 2:594211‑M1/151‑105 (MQ=255) gAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaata < 2:3590356‑M1/151‑106 (MQ=255) ttCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaataccc < 1:2599860‑M1/151‑109 (MQ=255) tCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccg < 1:5660036‑M1/151‑110 (MQ=255) cGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgg < 2:2267339‑M1/151‑111 (MQ=255) gAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccggg < 2:5595823‑M1/151‑112 (MQ=255) gAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccggg > 2:508165‑M1/1‑40 (MQ=255) gAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccggg > 1:232333‑M1/1‑40 (MQ=255) gAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccggg > 2:1889711‑M1/1‑40 (MQ=255) gcgcGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtc > 2:1940844‑M1/1‑38 (MQ=255) cgggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgct < 1:2041385‑M1/151‑117 (MQ=255) cgggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgct > 1:657030‑M1/1‑35 (MQ=255) gggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcggttttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctg < 2:6301577‑M1/151‑118 (MQ=255) gcggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgat < 1:163608‑M1/151‑120 (MQ=255) tAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatat < 2:203286‑M1/151‑129 (MQ=255) aaTCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatc > 1:3583965‑M1/1‑22 (MQ=255) aTCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatca < 2:3931870‑M1/151‑131 (MQ=255) aTCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatca < 2:1276277‑M1/151‑131 (MQ=255) aTCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatca > 1:3838487‑M1/1‑21 (MQ=255) ccATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctggtgcggaatatcagt > 2:4517837‑M1/1‑19 (MQ=255) agtcatcaatGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttc < 2:602653‑M1/149‑135 (MQ=255) aTTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttc > 1:4782786‑M1/1‑17 (MQ=255) tcatcaATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccg > 2:847901‑M1/1‑15 (MQ=255) tcatcaATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccg < 1:522299‑M1/151‑137 (MQ=255) aaTGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgc < 1:4708680‑M1/151‑142 (MQ=255) aaTGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgc > 1:2167105‑M1/1‑10 (MQ=255) tGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgc > 1:2794817‑M1/1‑8 (MQ=255) tGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgc < 1:851415‑M1/151‑144 (MQ=255) tGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgc < 2:109958‑M1/151‑144 (MQ=255) cGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcggttttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaa < 2:5693428‑M1/151‑146 (MQ=255) gggggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacctctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaac < 2:5284952‑M1/151‑147 (MQ=255) gggggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaac < 1:4570686‑M1/151‑147 (MQ=255) ggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaacgct < 2:3498323‑M1/151‑150 (MQ=255) gcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccccatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaccgctc > 2:3167088‑M1/1‑1 (MQ=255) gcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagtcccgcgcgcgcaacgctg > 1:5213513‑M1/1‑1 (MQ=255) | AAGGTGTTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC > CP009974/4425614‑4425914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |