BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	3,503,916	Δ2,603 bp		RPPX_15645–RPPX_15650	RPPX_15645, RPPX_15650

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	3503916–3506512	3506518	7–2603	321 [0]	[0] 319	RPPX_15645–RPPX_15650	RPPX_15645,RPPX_15650

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 3503915	0 (0.000)	311 (1.010)	171/282	0.4	100%	intergenic (‑249/+106)	RPPX_15640/RPPX_15645	membrane protein/ATPase AAA
*	?	CP009974	3506519 =	0 (0.000)	311 (1.010)	171/282	0.4	100%	intergenic (‑211/‑14)	RPPX_15650/RPPX_15655	integrase/tRNA 2‑thiocytidine biosynthesis protein TtcA

Only 100 of 321 total aligned reads displayed.

CGCAGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTC  >  CP009974/3503765‑3504057

cGCAGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCG                                                                                                                                                <  1:1769723‑M1/151‑1 (MQ=255)

 gCAGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGc                                                                                                                                               <  1:5980440‑M1/151‑2 (MQ=255)

   aGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcgg                                                                                                                                             <  2:5883855‑M1/151‑4 (MQ=255)

   aGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcgg                                                                                                                                             <  2:2544291‑M1/151‑4 (MQ=255)

        aGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatcca                                                                                                                                        <  1:3808585‑M1/151‑9 (MQ=255)

        aGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatcca                                                                                                                                        <  1:773621‑M1/151‑9 (MQ=255)

        aGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatcca                                                                                                                                        >  2:1575888‑M1/1‑143 (MQ=255)

           aaGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagc                                                                                                                                     <  1:5778744‑M1/151‑12 (MQ=255)

           aaGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagc                                                                                                                                     >  1:6332896‑M1/1‑140 (MQ=255)

           aaGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagc                                                                                                                                     >  1:3345238‑M1/1‑140 (MQ=255)

                  tACCTACATAAACCGCGCTTTTTATTTCTATTTGCTCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctattg                                                                                                                              >  2:1107588‑M1/1‑133 (MQ=255)

                       aCATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcacc                                                                                                                         >  2:4451552‑M1/1‑128 (MQ=255)

                       aCATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcacc                                                                                                                         >  1:125157‑M1/1‑128 (MQ=255)

                       aCATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcacc                                                                                                                         >  2:4609319‑M1/1‑128 (MQ=255)

                       aCATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcacc                                                                                                                         >  1:1152724‑M1/1‑128 (MQ=255)

                          tAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctc                                                                                                                      <  2:769536‑M1/151‑27 (MQ=255)

                            aaCCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctc                                                                                                                    <  1:4768625‑M1/151‑29 (MQ=255)

                            aaCCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctc                                                                                                                    <  1:2624481‑M1/151‑29 (MQ=255)

                                 cgcTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtca                                                                                                               <  2:6182370‑M1/151‑34 (MQ=255)

                                 cgcTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtca                                                                                                               <  1:5831567‑M1/151‑34 (MQ=255)

                                  gcTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaa                                                                                                              <  1:1315511‑M1/151‑35 (MQ=255)

                                   cTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaac                                                                                                             >  1:6098551‑M1/1‑116 (MQ=255)

                                    tttttAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaacc                                                                                                            >  2:3970946‑M1/1‑115 (MQ=255)

                                      tttAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccag                                                                                                          <  1:309068‑M1/151‑39 (MQ=255)

                                       ttAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccaga                                                                                                         >  2:2760667‑M1/1‑112 (MQ=255)

                                        tAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaa                                                                                                        >  1:1134043‑M1/1‑111 (MQ=255)

                                          gagCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaaca                                                                                                      <  1:2401273‑M1/151‑43 (MQ=255)

                                          gagCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaaca                                                                                                      >  1:4453052‑M1/1‑109 (MQ=255)

                                           agCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaa                                                                                                     <  2:16457‑M1/151‑44 (MQ=255)

                                            gCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaa                                                                                                    <  1:3664895‑M1/151‑45 (MQ=255)

                                            gCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaa                                                                                                    >  2:3163526‑M1/1‑107 (MQ=255)

                                              aaaTTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaact                                                                                                  <  2:1357020‑M1/151‑47 (MQ=255)

                                               aaTTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactg                                                                                                 <  1:6393012‑M1/151‑48 (MQ=255)

                                               aaTTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactg                                                                                                 <  1:157851‑M1/151‑48 (MQ=255)

                                                 ttGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgca                                                                                               >  1:3942839‑M1/1‑102 (MQ=255)

                                                  tGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaa                                                                                              <  1:4952031‑M1/151‑51 (MQ=255)

                                                  tGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaa                                                                                              >  1:1518212‑M1/1‑101 (MQ=255)

                                                   gcgcTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaa                                                                                             >  2:3796775‑M1/1‑100 (MQ=255)

                                                     gcTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaa                                                                                           <  1:2685806‑M1/151‑54 (MQ=255)

                                                       tGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacg                                                                                         <  1:1465751‑M1/151‑56 (MQ=255)

                                                       tGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaaaaaaaagaaaaaacg                                                                                         <  2:1070332‑M1/151‑56 (MQ=255)

                                                             ccGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaatcgccactggcacccgctcgggcaacccgcacaaactgcaaaaacgcctgcg                                                                                   >  2:6055875‑M1/1‑90 (MQ=255)

                                                             ccGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcg                                                                                   <  1:4245627‑M1/151‑62 (MQ=255)

                                                               gTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtc                                                                                 <  1:5442643‑M1/151‑64 (MQ=255)

                                                               gTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtc                                                                                 <  2:2596015‑M1/151‑64 (MQ=255)

                                                               gTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtc                                                                                 <  2:4207974‑M1/151‑64 (MQ=255)

                                                                tGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcg                                                                                <  2:4973532‑M1/151‑65 (MQ=255)

                                                                 gCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgt                                                                               <  1:2867642‑M1/151‑66 (MQ=255)

                                                                  cTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtc                                                                              >  2:3522112‑M1/1‑85 (MQ=255)

                                                                  cTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGccgatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcacaaacgcctgcgtcgtc                                                                              >  2:6253158‑M1/1‑85 (MQ=255)

                                                                    gTTGATTACAATGAAGTCTTTCTCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctc                                                                            <  1:1901189‑M1/151‑69 (MQ=255)

                                                                    gTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctc                                                                            <  1:673671‑M1/151‑69 (MQ=255)

                                                                     ttGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcg                                                                           >  1:2780670‑M1/1‑82 (MQ=255)

                                                                      tGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgc                                                                          <  1:2179777‑M1/151‑71 (MQ=255)

                                                                      tGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgc                                                                          >  1:5599064‑M1/1‑81 (MQ=255)

                                                                        aTTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctg                                                                        >  2:1033150‑M1/1‑79 (MQ=255)

                                                                        aTTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctg                                                                        >  1:4048347‑M1/1‑79 (MQ=255)

                                                                         ttACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctgg                                                                       <  2:6368437‑M1/151‑74 (MQ=255)

                                                                           aCAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcg                                                                     >  2:127518‑M1/1‑76 (MQ=255)

                                                                           aCAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcg                                                                     <  1:3006495‑M1/151‑76 (MQ=255)

                                                                            cAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcga                                                                    >  1:2123010‑M1/1‑75 (MQ=255)

                                                                               tGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagc                                                                 >  1:2820441‑M1/1‑72 (MQ=255)

                                                                               tGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagc                                                                 >  1:3715238‑M1/1‑72 (MQ=255)

                                                                                   gTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatc                                                             <  2:3345238‑M1/151‑84 (MQ=255)

                                                                                   gTCTTGATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcggctcgctggcgaagccatc                                                             <  2:4726171‑M1/151‑84 (MQ=255)

                                                                                    tCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatca                                                            <  2:1811063‑M1/151‑85 (MQ=255)

                                                                                     cTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcac                                                           >  1:2253202‑M1/1‑66 (MQ=255)

                                                                                     cTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcac                                                           <  2:4336731‑M1/151‑86 (MQ=255)

                                                                                       ttATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccg                                                         >  1:3490425‑M1/1‑64 (MQ=255)

                                                                                         aTCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgac                                                       >  1:3196490‑M1/1‑62 (MQ=255)

                                                                                           cGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgacta                                                     >  1:3386878‑M1/1‑60 (MQ=255)

                                                                                            ggAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactac                                                    >  1:1080701‑M1/1‑59 (MQ=255)

                                                                                                 gCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacat                                               >  2:3666929‑M1/1‑54 (MQ=255)

                                                                                                 gCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacat                                               <  2:1836113‑M1/151‑98 (MQ=255)

                                                                                                 gCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacat                                               >  1:5545834‑M1/1‑54 (MQ=255)

                                                                                                    tACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcgttcaaccagaaaaaacaacaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgat                                            <  2:1714753‑M1/151‑101 (MQ=255)

                                                                                                      cAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcg                                          <  1:5254390‑M1/151‑103 (MQ=255)

                                                                                                       aGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcga                                         >  1:611199‑M1/1‑48 (MQ=255)

                                                                                                           gcgTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggat                                     <  2:4120806‑M1/151‑108 (MQ=255)

                                                                                                            cgTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatg                                    <  1:4609319‑M1/151‑109 (MQ=255)

                                                                                                            cgTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatg                                    <  1:5915813‑M1/151‑109 (MQ=255)

                                                                                                                 cgTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgac                               >  2:2315279‑M1/1‑38 (MQ=255)

                                                                                                                   tttGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaa                             >  2:6466816‑M1/1‑36 (MQ=255)

                                                                                                                       tgCGTAAAATAGCCGGCGTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtc                         <  2:4520257‑M1/151‑120 (MQ=255)

                                                                                                                              aaTAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtct                  >  2:3009519‑M1/1‑25 (MQ=255)

                                                                                                                              aaTAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtct                  <  2:5916135‑M1/151‑127 (MQ=255)

                                                                                                                                tAGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgc                <  1:3574779‑M1/151‑129 (MQ=255)

                                                                                                                                 aGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcc               >  1:1439263‑M1/1‑22 (MQ=255)

                                                                                                                                 aGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcc               <  1:3463346‑M1/151‑130 (MQ=255)

                                                                                                                                 aGCCGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcc               >  2:2113403‑M1/1‑22 (MQ=255)

                                                                                                                                 aGCCGGCTTGTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcc               <  1:573970‑M1/151‑130 (MQ=255)

                                                                                                                                   ccGGCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctg             <  1:948788‑M1/151‑132 (MQ=255)

                                                                                                                                      gCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtcc          <  2:49338‑M1/151‑135 (MQ=255)

                                                                                                                                      gCTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtcc          <  2:5641449‑M1/151‑135 (MQ=255)

                                                                                                                                       cTTTTGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgccgtctcgctggcgaagccatcaccgactacaacatgatcgccgatggcgacaagggcaacgtctgcctgtccg         >  2:5609863‑M1/1‑16 (MQ=255)

                                                                                                                                          ttGTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcg      <  2:3421077‑M1/151‑139 (MQ=255)

                                                                                                                                           tGTCACACCTCGcggatccaagcgctatgggcacccactcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcgg     <  2:878450‑M1/151‑140 (MQ=255)

                                                                                                                                            gTCACACCTGGcggatccaagcgctatgggcaccctctcggtcacccagaaccaactgcaaaatcgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgctcgaggatggcgacaaggtcatggtctgcctgtccggcggc    <  1:5303505‑M1/151‑141 (MQ=255)

                                                                                                                                            gTCACACCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggc    <  1:203652‑M1/151‑141 (MQ=255)

                                                                                                                                              cacaCCTCGcggatccaagcgctatgggcaccctctcggtcaaccagaacaaactgcaaaaacgcctgcgtcgtctcgctggcgaagccatcaccgactacaacatgatcgaggatggcgacaaggtcatggtctgcctgtccggcggcaa  >  1:6239353‑M1/1‑9 (MQ=255)

CGCAGTATAGGAAGCCGTTACCTACATAAACCGCGCTTTTTAGAGCAAATTGCGCTGTAAGCCGTGCTGTTGATTACAATGAAGTCTTTATCGGAATGCCTACAGCGGCGTCGCGTTTGTGCGTAAAATAGCCGGCTTTTGTCACACCTCGTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTC  >  CP009974/3503765‑3504057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`